FFCP PHASE1:Hg19::chr5:142000787..142000807,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:142000787..142000807,- | |||
|description=CAGE_peak_at_chr5:142000787..142000807,- | |description=CAGE_peak_at_chr5:142000787..142000807,- | ||
|id=chr5:142000787..142000807,- | |id=chr5:142000787..142000807,- | ||
|ontology_enrichment_celltype=CL:0000055!2.49e-11!180;CL:0000327!5.06e-09!14;CL:0000667!2.53e-08!6;CL:0000058!2.53e-08!6;CL:0000138!2.53e-08!6;CL:0000057!2.79e-08!75;CL:0000153!4.46e-08!9;CL:0000447!4.46e-08!9;CL:0002620!8.13e-08!23;CL:0000499!9.02e-07!27 | |ontology_enrichment_celltype=CL:0000055!2.49e-11!180;CL:0000327!5.06e-09!14;CL:0000667!2.53e-08!6;CL:0000058!2.53e-08!6;CL:0000138!2.53e-08!6;CL:0000057!2.79e-08!75;CL:0000153!4.46e-08!9;CL:0000447!4.46e-08!9;CL:0002620!8.13e-08!23;CL:0000499!9.02e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000222;1.81e-40;1!CL:0000054;5.15e-21;2!CL:0000137;5.15e-21;2!CL:0000092;5.15e-21;2!CL:0002541;1.22e-14;3!CL:0002592;1.71e-14;3!CL:0000138;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.70e-21,2;CL:0000137,5.70e-21,2;CL:0000092,5.70e-21,2;CL:0002541,1.22e-14,3;CL:0002592,1.40e-14,3;CL:0000058,7.25e-08,6;CL:0000138,7.25e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.26e-09!5;DOID:450!4.26e-09!5;DOID:66!4.26e-09!5;DOID:423!4.26e-09!5;DOID:0080000!4.26e-09!5;DOID:11722!4.26e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:200;5.15e-21;2!DOID:4305;5.15e-21;2!DOID:201;6.55e-08;6!DOID:0060100;6.55e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:200,5.70e-21,2;DOID:4305,5.70e-21,2;DOID:201,6.78e-08,6;DOID:0060100,6.78e-08,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.22e-14;3!UBERON:0000920;1.22e-14;3!UBERON:0003498;1.71e-14;3!UBERON:0005985;1.71e-14;3!UBERON:0001621;1.71e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.22e-14,3;UBERON:0001621,1.40e-14,3;UBERON:0003498,2.74e-09,5;UBERON:0005985,2.74e-09,5;UBERON:0003124,5.08e-07,7 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.869079113764942,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0.877955241761676,0.30648779579902,0,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0,0.206105058476878,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.762520775695299,0,0,0.318203247925937,0,0,0,0.235624804691373,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.108647371922008,0,2.1983422416447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0.53168342911599,0,0.150257608997218,0,0,0,0,0,0,0.800055529326307,0,0,1.26184898228651,0.385239660814607,0,0,0,0,0.244736704506468,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.869079113764942,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0.877955241761676,0.30648779579902,0,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0,0.206105058476878,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.762520775695299,0,0,0.318203247925937,0,0,0,0.235624804691373,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.108647371922008,0,2.1983422416447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0.53168342911599,0,0.150257608997218,0,0,0,0,0,0,0.800055529326307,0,0,1.26184898228651,0.385239660814607,0,0,0,0,0.244736704506468,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:142000787..142000807,- | |short_description=p@chr5:142000787..142000807,- | ||
}} | }} |
Latest revision as of 10:49, 30 July 2015
Short description: | p@chr5:142000787..142000807, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:142000787..142000807, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.70e-21 | 2 |
osteocyte | 5.70e-21 | 2 |
osteoclast | 5.70e-21 | 2 |
chorionic membrane mesenchymal stem cell | 1.22e-14 | 3 |
smooth muscle cell of the coronary artery | 1.40e-14 | 3 |
chondroblast | 7.25e-08 | 6 |
chondrocyte | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.22e-14 | 3 |
coronary artery | 1.40e-14 | 3 |
heart blood vessel | 2.74e-09 | 5 |
coronary vessel | 2.74e-09 | 5 |
chorion | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 5.70e-21 | 2 |
bone giant cell tumor | 5.70e-21 | 2 |
connective tissue cancer | 6.78e-08 | 6 |
musculoskeletal system cancer | 6.78e-08 | 6 |