FFCP PHASE1:Hg19::chr6:107235249..107235267,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100422737 | |EntrezGene=100422737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000436659,NR_033557,uc003pro.1_5end | |association_with_transcript=32bp_to_ENST00000436659,NR_033557,uc003pro.1_5end | ||
|cluster_id=chr6:107235249..107235267,- | |||
|coexpression_cluster_id=C4540 | |||
|description=CAGE_peak_1_at_LOC100422737_5end | |description=CAGE_peak_1_at_LOC100422737_5end | ||
|id=chr6:107235249..107235267,- | |id=chr6:107235249..107235267,- | ||
|ontology_enrichment_celltype=CL:0000181!2.16e-17!12;CL:0000417!2.16e-17!12;CL:0000668!2.16e-17!12;CL:0000414!2.16e-17!12;CL:0000412!2.16e-17!12;CL:0000182!2.16e-17!12;CL:1000497!3.40e-08!18;CL:0002518!3.40e-08!18;CL:0000223!4.59e-08!59;CL:0000239!6.74e-07!3;CL:1000615!6.74e-07!3;CL:0002306!6.74e-07!3 | |ontology_enrichment_celltype=CL:0000181!2.16e-17!12;CL:0000417!2.16e-17!12;CL:0000668!2.16e-17!12;CL:0000414!2.16e-17!12;CL:0000412!2.16e-17!12;CL:0000182!2.16e-17!12;CL:1000497!3.40e-08!18;CL:0002518!3.40e-08!18;CL:0000223!4.59e-08!59;CL:0000239!6.74e-07!3;CL:1000615!6.74e-07!3;CL:0002306!6.74e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.32e-19;12!CL:0000239;1.47e-09;3!CL:1000615;1.47e-09;3!CL:0002306;1.47e-09;3!CL:0000313;2.70e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.55e-19,12;CL:0000239,1.32e-09,3;CL:1000615,1.32e-09,3;CL:0002306,1.32e-09,3;CL:0000313,2.70e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.23e-23;13!UBERON:0004161;6.44e-21;11!UBERON:0003104;4.84e-19;31!UBERON:0003918;6.89e-11;10!UBERON:0007687;6.89e-11;10!UBERON:0001041;1.20e-09;30!UBERON:0006242;3.55e-08;1!UBERON:0000358;9.72e-08;1!UBERON:0003124;1.49e-07;1 | |||
|ontology_enrichment_disease=DOID:299!6.74e-10!25;DOID:4468!1.36e-09!2;DOID:305!6.63e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:2152;2.70e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.70e-08,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002423;1.59e-24;25!UBERON:0002107;4.65e-21;19!UBERON:0006925;4.65e-21;19!UBERON:0005172;7.87e-16;52!UBERON:0005173;7.87e-16;52!UBERON:0002365;1.29e-12;31!UBERON:0002330;1.29e-12;31!UBERON:0002417;2.63e-11;58!UBERON:0000916;2.63e-11;58!UBERON:0002368;2.21e-10;33!UBERON:0006853;1.47e-09;3!UBERON:0007685;1.47e-09;3!UBERON:0004134;1.47e-09;3!UBERON:0002113;2.19e-09;24!UBERON:0011143;2.19e-09;24!UBERON:0000949;2.45e-08;43!UBERON:0004911;2.70e-08;1!UBERON:0000489;1.14e-07;29!UBERON:0006554;2.14e-07;30!UBERON:0001008;2.14e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.79e-24,25;UBERON:0000015,1.79e-24,25;UBERON:0002423,1.79e-24,25;UBERON:0006235,1.79e-24,25;UBERON:0004161,1.79e-24,25;UBERON:0005172,2.09e-24,54;UBERON:0005173,2.09e-24,54;UBERON:0008835,1.35e-22,22;UBERON:0003894,1.35e-22,22;UBERON:0002417,1.15e-21,60;UBERON:0000916,1.15e-21,60;UBERON:0009854,1.49e-21,23;UBERON:0002107,4.91e-21,19;UBERON:0006925,4.91e-21,19;UBERON:0008836,4.91e-21,19;UBERON:0007499,1.03e-19,25;UBERON:0009856,6.68e-19,26;UBERON:0005177,2.43e-15,101;UBERON:0002365,1.90e-12,31;UBERON:0002330,1.90e-12,31;UBERON:0009569,9.11e-12,112;UBERON:0002368,6.81e-11,35;UBERON:0000949,2.06e-10,45;UBERON:0003929,2.10e-10,54;UBERON:0006853,1.32e-09,3;UBERON:0007685,1.32e-09,3;UBERON:0004134,1.32e-09,3;UBERON:0002113,1.28e-08,26;UBERON:0003918,1.28e-08,26;UBERON:0011143,1.28e-08,26;UBERON:0005095,1.28e-08,26;UBERON:0007687,1.28e-08,26;UBERON:0004911,2.70e-08,1;UBERON:0005911,1.22e-07,82;UBERON:0003104,2.86e-07,160;UBERON:0009142,2.86e-07,160;UBERON:0000489,3.87e-07,31;UBERON:0002100,5.05e-07,199;UBERON:0001041,5.07e-07,87 | |||
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| ||
|short_description=p1@LOC100422737 | |short_description=p1@LOC100422737 | ||
}} | }} |
Latest revision as of 16:06, 19 September 2015
Short description: | p1@LOC100422737 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100422737_5end |
Coexpression cluster: | C4540_serous_renal_Hepatocyte_signet_gall_liver_kidney |
Association with transcript: | 32bp_to_ENST00000436659, NR_033557, uc003pro.1_5end |
EntrezGene: | LOC100422737 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.55e-19 | 12 |
brush border epithelial cell | 1.32e-09 | 3 |
kidney cortex tubule cell | 1.32e-09 | 3 |
epithelial cell of proximal tubule | 1.32e-09 | 3 |
serous secreting cell | 2.70e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.70e-08 | 1 |