FFCP PHASE1:Hg19::chr7:150130832..150130852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000486954_5end | |association_with_transcript=14bp_to_ENST00000486954_5end | ||
|cluster_id=chr7:150130832..150130852,+ | |||
|coexpression_cluster_id=C2717 | |||
|description=CAGE_peak_2_at_ENST00000486954_5end | |description=CAGE_peak_2_at_ENST00000486954_5end | ||
|id=chr7:150130832..150130852,+ | |id=chr7:150130832..150130852,+ | ||
|ontology_enrichment_celltype=CL:0002087!9.82e-19!119;CL:0000738!1.24e-17!140;CL:0000037!1.29e-16!172;CL:0000566!1.29e-16!172;CL:0000988!7.54e-15!182;CL:0002031!1.08e-13!124;CL:0002032!1.13e-13!165;CL:0000837!1.13e-13!165;CL:0002194!2.31e-12!63;CL:0000576!2.31e-12!63;CL:0000040!2.31e-12!63;CL:0000559!2.31e-12!63;CL:0002009!9.30e-12!65;CL:0000839!2.10e-10!70;CL:0000557!3.70e-10!71;CL:0002057!9.76e-10!42;CL:0000766!4.96e-09!76;CL:0000763!8.65e-09!112;CL:0000049!8.65e-09!112;CL:0000860!9.35e-09!45;CL:0000784!6.53e-07!3 | |ontology_enrichment_celltype=CL:0002087!9.82e-19!119;CL:0000738!1.24e-17!140;CL:0000037!1.29e-16!172;CL:0000566!1.29e-16!172;CL:0000988!7.54e-15!182;CL:0002031!1.08e-13!124;CL:0002032!1.13e-13!165;CL:0000837!1.13e-13!165;CL:0002194!2.31e-12!63;CL:0000576!2.31e-12!63;CL:0000040!2.31e-12!63;CL:0000559!2.31e-12!63;CL:0002009!9.30e-12!65;CL:0000839!2.10e-10!70;CL:0000557!3.70e-10!71;CL:0002057!9.76e-10!42;CL:0000766!4.96e-09!76;CL:0000763!8.65e-09!112;CL:0000049!8.65e-09!112;CL:0000860!9.35e-09!45;CL:0000784!6.53e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.28e-17;3!CL:0000945;4.18e-14;24!CL:0000946;4.83e-07;1!CL:0000786;4.83e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.43e-17,3;CL:0000738,1.11e-14,136;CL:0002087,1.37e-14,115;CL:0000945,4.14e-14,24;CL:0000826,4.14e-14,24;CL:0000037,1.30e-13,168;CL:0000988,1.16e-12,177;CL:0002031,3.24e-12,120;CL:0002032,1.22e-11,161;CL:0000837,1.22e-11,161;CL:0000542,5.74e-09,53;CL:0000051,5.74e-09,53;CL:0000838,2.20e-07,52;CL:0002194,4.48e-07,59;CL:0000576,4.48e-07,59;CL:0000040,4.48e-07,59;CL:0000559,4.48e-07,59;CL:0000946,4.69e-07,1;CL:0000786,4.69e-07,1;CL:0000980,4.69e-07,1;CL:0002009,8.57e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.08e-07;7!UBERON:0001045;6.42e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;2.95e-07;1!DOID:0050177;2.95e-07;1!DOID:0050427;2.95e-07;1!DOID:12603;3.72e-07;1!DOID:2355;6.42e-07;1!DOID:4960;7.82e-07;1!DOID:0070004;7.82e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.14e-09,51;DOID:0060083,6.14e-09,51;DOID:630,2.95e-07,1;DOID:0050177,2.95e-07,1;DOID:0050427,2.95e-07,1;DOID:12603,3.73e-07,1;DOID:2355,6.24e-07,1;DOID:4960,7.82e-07,1;DOID:0070004,7.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.10e-14!115;UBERON:0002390!1.55e-12!102;UBERON:0003061!1.55e-12!102;UBERON:0002193!2.23e-12!112;UBERON:0002405!3.13e-10!115;UBERON:0002371!3.68e-09!80;UBERON:0004177!5.92e-09!7;UBERON:0001474!4.97e-08!86;UBERON:0001049!1.23e-07!57;UBERON:0005068!1.23e-07!57;UBERON:0006241!1.23e-07!57;UBERON:0007135!1.23e-07!57;UBERON:0002106!7.58e-07!3;UBERON:0004854!7.58e-07!3;UBERON:0009034!7.58e-07!3;UBERON:0002095!7.58e-07!3;UBERON:0004782!7.58e-07!3;UBERON:0003281!7.58e-07!3;UBERON:0009664!7.58e-07!3;UBERON:0002296!7.58e-07!3;UBERON:0005602!7.58e-07!3;UBERON:0001179!7.58e-07!3;UBERON:0006293!7.58e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!4.10e-14!115;UBERON:0002390!1.55e-12!102;UBERON:0003061!1.55e-12!102;UBERON:0002193!2.23e-12!112;UBERON:0002405!3.13e-10!115;UBERON:0002371!3.68e-09!80;UBERON:0004177!5.92e-09!7;UBERON:0001474!4.97e-08!86;UBERON:0001049!1.23e-07!57;UBERON:0005068!1.23e-07!57;UBERON:0006241!1.23e-07!57;UBERON:0007135!1.23e-07!57;UBERON:0002106!7.58e-07!3;UBERON:0004854!7.58e-07!3;UBERON:0009034!7.58e-07!3;UBERON:0002095!7.58e-07!3;UBERON:0004782!7.58e-07!3;UBERON:0003281!7.58e-07!3;UBERON:0009664!7.58e-07!3;UBERON:0002296!7.58e-07!3;UBERON:0005602!7.58e-07!3;UBERON:0001179!7.58e-07!3;UBERON:0006293!7.58e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.57e-17;3!UBERON:0004177;1.36e-10;5!UBERON:0005057;1.36e-10;5!UBERON:0001154;6.42e-07;1!UBERON:0001153;6.42e-07;1!UBERON:0009854;6.42e-07;1!UBERON:0002372;7.82e-07;1!UBERON:0001961;7.82e-07;1!UBERON:0001744;7.82e-07;1!UBERON:0001042;7.82e-07;1!UBERON:0001735;7.82e-07;1!UBERON:0002405;9.37e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.24e-17,3;UBERON:0004854,2.24e-17,3;UBERON:0009034,2.24e-17,3;UBERON:0002095,2.24e-17,3;UBERON:0004782,2.24e-17,3;UBERON:0003281,2.24e-17,3;UBERON:0009664,2.24e-17,3;UBERON:0002296,2.24e-17,3;UBERON:0005602,2.24e-17,3;UBERON:0001179,2.24e-17,3;UBERON:0006293,2.24e-17,3;UBERON:0002405,3.63e-11,93;UBERON:0005409,2.10e-09,25;UBERON:0002193,3.54e-09,108;UBERON:0002390,9.81e-08,98;UBERON:0003061,9.81e-08,98;UBERON:0004177,1.02e-07,7;UBERON:0005057,1.02e-07,7;UBERON:0001154,6.60e-07,1;UBERON:0001153,6.60e-07,1;UBERON:0001045,6.60e-07,1;UBERON:0002372,7.39e-07,1;UBERON:0001961,7.39e-07,1;UBERON:0001744,7.39e-07,1;UBERON:0001735,7.39e-07,1;UBERON:0000945,8.40e-07,8;UBERON:0010039,8.40e-07,8 | |||
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|short_description=p2@ENST00000486954 | |short_description=p2@ENST00000486954 | ||
}} | }} |
Latest revision as of 07:24, 31 July 2015
Short description: | p2@ENST00000486954 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000486954_5end |
Coexpression cluster: | C2717_acute_B_xeroderma_b_splenic_plasma_Dendritic |
Association with transcript: | 14bp_to_ENST00000486954_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.43e-17 | 3 |
leukocyte | 1.11e-14 | 136 |
nongranular leukocyte | 1.37e-14 | 115 |
lymphocyte of B lineage | 4.14e-14 | 24 |
pro-B cell | 4.14e-14 | 24 |
hematopoietic stem cell | 1.30e-13 | 168 |
hematopoietic cell | 1.16e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 3.24e-12 | 120 |
hematopoietic oligopotent progenitor cell | 1.22e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-11 | 161 |
lymphocyte | 5.74e-09 | 53 |
common lymphoid progenitor | 5.74e-09 | 53 |
lymphoid lineage restricted progenitor cell | 2.20e-07 | 52 |
monopoietic cell | 4.48e-07 | 59 |
monocyte | 4.48e-07 | 59 |
monoblast | 4.48e-07 | 59 |
promonocyte | 4.48e-07 | 59 |
antibody secreting cell | 4.69e-07 | 1 |
plasma cell | 4.69e-07 | 1 |
plasmablast | 4.69e-07 | 1 |
macrophage dendritic cell progenitor | 8.57e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.24e-17 | 3 |
gastrointestinal system mesentery | 2.24e-17 | 3 |
stomach region | 2.24e-17 | 3 |
mesentery | 2.24e-17 | 3 |
gastrointestinal system serosa | 2.24e-17 | 3 |
mesentery of stomach | 2.24e-17 | 3 |
gut mesentery | 2.24e-17 | 3 |
dorsal mesentery | 2.24e-17 | 3 |
dorsal mesogastrium | 2.24e-17 | 3 |
peritoneal cavity | 2.24e-17 | 3 |
spleen primordium | 2.24e-17 | 3 |
immune system | 3.63e-11 | 93 |
gastrointestinal system | 2.10e-09 | 25 |
hemolymphoid system | 3.54e-09 | 108 |
hematopoietic system | 9.81e-08 | 98 |
blood island | 9.81e-08 | 98 |
hemopoietic organ | 1.02e-07 | 7 |
immune organ | 1.02e-07 | 7 |
vermiform appendix | 6.60e-07 | 1 |
caecum | 6.60e-07 | 1 |
midgut | 6.60e-07 | 1 |
tonsil | 7.39e-07 | 1 |
mucosa-associated lymphoid tissue | 7.39e-07 | 1 |
lymphoid tissue | 7.39e-07 | 1 |
tonsillar ring | 7.39e-07 | 1 |
stomach | 8.40e-07 | 8 |
food storage organ | 8.40e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.14e-09 | 51 |
immune system cancer | 6.14e-09 | 51 |
genetic disease | 2.95e-07 | 1 |
monogenic disease | 2.95e-07 | 1 |
xeroderma pigmentosum | 2.95e-07 | 1 |
acute leukemia | 3.73e-07 | 1 |
anemia | 6.24e-07 | 1 |
bone marrow cancer | 7.82e-07 | 1 |
myeloma | 7.82e-07 | 1 |