FFCP PHASE1:Hg19::chr4:40192723..40192736,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399 | |EntrezGene=399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |HGNC=686 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_ENST00000505618_5end | |association_with_transcript=50bp_to_ENST00000505618_5end | ||
|cluster_id=chr4:40192723..40192736,+ | |||
|coexpression_cluster_id=C580 | |||
|description=CAGE_peak_10_at_RHOH_5end | |description=CAGE_peak_10_at_RHOH_5end | ||
|id=chr4:40192723..40192736,+ | |id=chr4:40192723..40192736,+ | ||
|ontology_enrichment_celltype=CL:0000084!1.29e-29!25;CL:0000827!1.29e-29!25;CL:0000542!1.78e-28!53;CL:0000051!1.78e-28!53;CL:0000791!1.05e-27!18;CL:0000789!1.05e-27!18;CL:0002420!1.05e-27!18;CL:0002419!1.05e-27!18;CL:0000790!1.05e-27!18;CL:0000838!1.60e-26!52;CL:0000625!8.95e-23!11;CL:0002087!3.00e-12!119;CL:0000738!1.81e-10!140;CL:0002031!1.86e-09!124;CL:0000624!1.07e-08!6;CL:0000815!7.86e-08!2;CL:0000792!7.86e-08!2;CL:0002677!7.86e-08!2;CL:0000037!2.52e-07!172;CL:0000566!2.52e-07!172 | |ontology_enrichment_celltype=CL:0000084!1.29e-29!25;CL:0000827!1.29e-29!25;CL:0000542!1.78e-28!53;CL:0000051!1.78e-28!53;CL:0000791!1.05e-27!18;CL:0000789!1.05e-27!18;CL:0002420!1.05e-27!18;CL:0002419!1.05e-27!18;CL:0000790!1.05e-27!18;CL:0000838!1.60e-26!52;CL:0000625!8.95e-23!11;CL:0002087!3.00e-12!119;CL:0000738!1.81e-10!140;CL:0002031!1.86e-09!124;CL:0000624!1.07e-08!6;CL:0000815!7.86e-08!2;CL:0000792!7.86e-08!2;CL:0002677!7.86e-08!2;CL:0000037!2.52e-07!172;CL:0000566!2.52e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.21e-11;25!CL:0000815;9.27e-07;2!CL:0000792;9.27e-07;2!CL:0002677;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.34e-11,25;CL:0000827,4.34e-11,25;CL:0000838,2.58e-07,52;CL:0000542,3.61e-07,53;CL:0000051,3.61e-07,53;CL:0000815,7.61e-07,2;CL:0000792,7.61e-07,2;CL:0002677,7.61e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.27e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.74e-11!7;UBERON:0002106!3.94e-09!3;UBERON:0004854!3.94e-09!3;UBERON:0009034!3.94e-09!3;UBERON:0002095!3.94e-09!3;UBERON:0004782!3.94e-09!3;UBERON:0003281!3.94e-09!3;UBERON:0009664!3.94e-09!3;UBERON:0002296!3.94e-09!3;UBERON:0005602!3.94e-09!3;UBERON:0001179!3.94e-09!3;UBERON:0006293!3.94e-09!3 | |ontology_enrichment_uberon=UBERON:0004177!4.74e-11!7;UBERON:0002106!3.94e-09!3;UBERON:0004854!3.94e-09!3;UBERON:0009034!3.94e-09!3;UBERON:0002095!3.94e-09!3;UBERON:0004782!3.94e-09!3;UBERON:0003281!3.94e-09!3;UBERON:0009664!3.94e-09!3;UBERON:0002296!3.94e-09!3;UBERON:0005602!3.94e-09!3;UBERON:0001179!3.94e-09!3;UBERON:0006293!3.94e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.14e-24;2!UBERON:0005058;7.14e-24;2!UBERON:0009113;7.14e-24;2!UBERON:0004177;3.97e-10;5!UBERON:0005057;3.97e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.97e-12,4;UBERON:0005058,1.97e-12,4;UBERON:0009113,1.97e-12,4;UBERON:0003295,1.97e-12,4;UBERON:0005562,1.97e-12,4;UBERON:0003351,1.39e-08,6;UBERON:0004177,1.78e-07,7;UBERON:0005057,1.78e-07,7 | |||
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| ||
|short_description=p10@RHOH | |short_description=p10@RHOH | ||
}} | }} |
Latest revision as of 18:00, 17 September 2015
Short description: | p10@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RHOH_5end |
Coexpression cluster: | C580_chronic_thymus_Hodgkin_acute_iPS_vein_Burkitt |
Association with transcript: | 50bp_to_ENST00000505618_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.34e-11 | 25 |
pro-T cell | 4.34e-11 | 25 |
lymphoid lineage restricted progenitor cell | 2.58e-07 | 52 |
lymphocyte | 3.61e-07 | 53 |
common lymphoid progenitor | 3.61e-07 | 53 |
regulatory T cell | 7.61e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.61e-07 | 2 |
naive regulatory T cell | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.97e-12 | 4 |
hemolymphoid system gland | 1.97e-12 | 4 |
thymic region | 1.97e-12 | 4 |
pharyngeal gland | 1.97e-12 | 4 |
thymus primordium | 1.97e-12 | 4 |
pharyngeal epithelium | 1.39e-08 | 6 |
hemopoietic organ | 1.78e-07 | 7 |
immune organ | 1.78e-07 | 7 |