FFCP PHASE1:Hg19::chr4:40194662..40194674,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399 | |EntrezGene=399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |HGNC=686 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000511967_5end | |association_with_transcript=0bp_to_ENST00000511967_5end | ||
|cluster_id=chr4:40194662..40194674,+ | |||
|coexpression_cluster_id=C1183 | |||
|description=CAGE_peak_15_at_RHOH_5end | |description=CAGE_peak_15_at_RHOH_5end | ||
|id=chr4:40194662..40194674,+ | |id=chr4:40194662..40194674,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.25e-84!24;CL:0000826!2.25e-84!24;CL:0000542!1.11e-40!53;CL:0000051!1.11e-40!53;CL:0000838!5.09e-37!52;CL:0000236!4.00e-36!14;CL:0000817!1.95e-19!3;CL:0002087!7.98e-16!119;CL:0000785!1.75e-13!2;CL:0000955!1.75e-13!2;CL:0000818!1.75e-13!2;CL:0000954!1.75e-13!2;CL:0000816!1.75e-13!2;CL:0002031!2.86e-13!124;CL:0000738!6.79e-13!140;CL:0002032!2.24e-10!165;CL:0000837!2.24e-10!165;CL:0000037!8.42e-10!172;CL:0000566!8.42e-10!172;CL:0000988!4.66e-09!182;CL:0000946!1.35e-07!1;CL:0000786!1.35e-07!1;CL:0000980!1.35e-07!1;CL:0000819!1.44e-07!1 | |ontology_enrichment_celltype=CL:0000945!2.25e-84!24;CL:0000826!2.25e-84!24;CL:0000542!1.11e-40!53;CL:0000051!1.11e-40!53;CL:0000838!5.09e-37!52;CL:0000236!4.00e-36!14;CL:0000817!1.95e-19!3;CL:0002087!7.98e-16!119;CL:0000785!1.75e-13!2;CL:0000955!1.75e-13!2;CL:0000818!1.75e-13!2;CL:0000954!1.75e-13!2;CL:0000816!1.75e-13!2;CL:0002031!2.86e-13!124;CL:0000738!6.79e-13!140;CL:0002032!2.24e-10!165;CL:0000837!2.24e-10!165;CL:0000037!8.42e-10!172;CL:0000566!8.42e-10!172;CL:0000988!4.66e-09!182;CL:0000946!1.35e-07!1;CL:0000786!1.35e-07!1;CL:0000980!1.35e-07!1;CL:0000819!1.44e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.21e-54;24!CL:0000542;1.19e-19;53!CL:0000236;5.56e-12;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.25e-54,24;CL:0000826,1.25e-54,24;CL:0000542,3.07e-30,53;CL:0000051,3.07e-30,53;CL:0000838,5.82e-25,52;CL:0002087,1.98e-13,115;CL:0000236,3.02e-11,14;CL:0000738,3.03e-11,136;CL:0002031,2.38e-10,120;CL:0002032,2.25e-09,161;CL:0000837,2.25e-09,161;CL:0000037,5.99e-09,168;CL:0000988,1.89e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.19e-19;53!UBERON:0001045;4.08e-18;1 | |||
|ontology_enrichment_disease=DOID:0060058!5.91e-23!10;DOID:630!3.10e-08!1;DOID:0050177!3.10e-08!1;DOID:0050427!3.10e-08!1;DOID:12603!4.35e-08!1;DOID:0060073!1.44e-07!1;DOID:8675!1.44e-07!1;DOID:3371!1.64e-07!1;DOID:4549!1.64e-07!1;DOID:5861!1.64e-07!1;DOID:6496!1.64e-07!1;DOID:2355!1.75e-07!1;DOID:2531!4.95e-07!51;DOID:0060083!4.95e-07!51 | |ontology_enrichment_disease=DOID:0060058!5.91e-23!10;DOID:630!3.10e-08!1;DOID:0050177!3.10e-08!1;DOID:0050427!3.10e-08!1;DOID:12603!4.35e-08!1;DOID:0060073!1.44e-07!1;DOID:8675!1.44e-07!1;DOID:3371!1.64e-07!1;DOID:4549!1.64e-07!1;DOID:5861!1.64e-07!1;DOID:6496!1.64e-07!1;DOID:2355!1.75e-07!1;DOID:2531!4.95e-07!51;DOID:0060083!4.95e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:630;4.08e-18;1!DOID:0050177;4.08e-18;1!DOID:0050427;4.08e-18;1!DOID:12603;1.03e-17;1!DOID:0060058;1.14e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.75e-18,1;DOID:0050177,3.75e-18,1;DOID:0050427,3.75e-18,1;DOID:12603,8.72e-18,1;DOID:0060058,1.23e-15,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!8.52e-10!3;UBERON:0004854!8.52e-10!3;UBERON:0009034!8.52e-10!3;UBERON:0002095!8.52e-10!3;UBERON:0004782!8.52e-10!3;UBERON:0003281!8.52e-10!3;UBERON:0009664!8.52e-10!3;UBERON:0002296!8.52e-10!3;UBERON:0005602!8.52e-10!3;UBERON:0001179!8.52e-10!3;UBERON:0006293!8.52e-10!3;UBERON:0001154!3.32e-08!1;UBERON:0001153!3.32e-08!1;UBERON:0002372!6.52e-08!1;UBERON:0001961!6.52e-08!1;UBERON:0001744!6.52e-08!1;UBERON:0001735!6.52e-08!1;UBERON:0002171!9.10e-08!1;UBERON:0006518!9.10e-08!1;UBERON:0008949!9.10e-08!1;UBERON:0000101!9.10e-08!1;UBERON:0002167!9.10e-08!1 | |ontology_enrichment_uberon=UBERON:0002106!8.52e-10!3;UBERON:0004854!8.52e-10!3;UBERON:0009034!8.52e-10!3;UBERON:0002095!8.52e-10!3;UBERON:0004782!8.52e-10!3;UBERON:0003281!8.52e-10!3;UBERON:0009664!8.52e-10!3;UBERON:0002296!8.52e-10!3;UBERON:0005602!8.52e-10!3;UBERON:0001179!8.52e-10!3;UBERON:0006293!8.52e-10!3;UBERON:0001154!3.32e-08!1;UBERON:0001153!3.32e-08!1;UBERON:0002372!6.52e-08!1;UBERON:0001961!6.52e-08!1;UBERON:0001744!6.52e-08!1;UBERON:0001735!6.52e-08!1;UBERON:0002171!9.10e-08!1;UBERON:0006518!9.10e-08!1;UBERON:0008949!9.10e-08!1;UBERON:0000101!9.10e-08!1;UBERON:0002167!9.10e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.08e-18;1!UBERON:0001153;4.08e-18;1!UBERON:0009854;4.08e-18;1!UBERON:0002106;5.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.44e-18,1;UBERON:0001153,4.44e-18,1;UBERON:0001045,4.44e-18,1;UBERON:0002106,5.80e-07,3;UBERON:0004854,5.80e-07,3;UBERON:0009034,5.80e-07,3;UBERON:0002095,5.80e-07,3;UBERON:0004782,5.80e-07,3;UBERON:0003281,5.80e-07,3;UBERON:0009664,5.80e-07,3;UBERON:0002296,5.80e-07,3;UBERON:0005602,5.80e-07,3;UBERON:0001179,5.80e-07,3;UBERON:0006293,5.80e-07,3 | |||
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|short_description=p15@RHOH | |short_description=p15@RHOH | ||
}} | }} |
Latest revision as of 18:04, 17 September 2015
Short description: | p15@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RHOH_5end |
Coexpression cluster: | C1183_splenic_CD19_Burkitt_acute_xeroderma_B_appendix |
Association with transcript: | 0bp_to_ENST00000511967_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.25e-54 | 24 |
pro-B cell | 1.25e-54 | 24 |
lymphocyte | 3.07e-30 | 53 |
common lymphoid progenitor | 3.07e-30 | 53 |
lymphoid lineage restricted progenitor cell | 5.82e-25 | 52 |
nongranular leukocyte | 1.98e-13 | 115 |
B cell | 3.02e-11 | 14 |
leukocyte | 3.03e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 2.38e-10 | 120 |
hematopoietic oligopotent progenitor cell | 2.25e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-09 | 161 |
hematopoietic stem cell | 5.99e-09 | 168 |
hematopoietic cell | 1.89e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.44e-18 | 1 |
caecum | 4.44e-18 | 1 |
midgut | 4.44e-18 | 1 |
spleen | 5.80e-07 | 3 |
gastrointestinal system mesentery | 5.80e-07 | 3 |
stomach region | 5.80e-07 | 3 |
mesentery | 5.80e-07 | 3 |
gastrointestinal system serosa | 5.80e-07 | 3 |
mesentery of stomach | 5.80e-07 | 3 |
gut mesentery | 5.80e-07 | 3 |
dorsal mesentery | 5.80e-07 | 3 |
dorsal mesogastrium | 5.80e-07 | 3 |
peritoneal cavity | 5.80e-07 | 3 |
spleen primordium | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.75e-18 | 1 |
monogenic disease | 3.75e-18 | 1 |
xeroderma pigmentosum | 3.75e-18 | 1 |
acute leukemia | 8.72e-18 | 1 |
lymphoma | 1.23e-15 | 10 |