FFCP PHASE1:Hg19::chr16:15835437..15835521,-: Difference between revisions
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|id=chr16:15835437..15835521,-
|short_description=p3@MYH11
|description=CAGE_peak_3_at_MYH11_5end
|association_with_transcript=0bp_to_D10667_5end
|EntrezGene=4629
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4629 | |EntrezGene=4629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7569 | |HGNC=7569 | ||
|TSSclassifier=strong | |||
|UniProt=P35749,Q7Z7R0 | |UniProt=P35749,Q7Z7R0 | ||
|association_with_transcript=0bp_to_D10667_5end | |||
|cluster_id=chr16:15835437..15835521,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_3_at_MYH11_5end | |||
|id=chr16:15835437..15835521,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;6.88e-12;65!UBERON:0007297;2.27e-10;2!UBERON:0006965;4.70e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.58e-80!115;UBERON:0001049!1.11e-12!57;UBERON:0005068!1.11e-12!57;UBERON:0006241!1.11e-12!57;UBERON:0007135!1.11e-12!57;UBERON:0002616!4.76e-12!59;UBERON:0003075!4.84e-11!86;UBERON:0007284!4.84e-11!86;UBERON:0002780!1.41e-10!41;UBERON:0001890!1.41e-10!41;UBERON:0006240!1.41e-10!41;UBERON:0002020!1.52e-10!34;UBERON:0003528!1.52e-10!34;UBERON:0000955!3.02e-10!69;UBERON:0006238!3.02e-10!69;UBERON:0002346!3.12e-10!90;UBERON:0003080!3.16e-10!42;UBERON:0005743!1.03e-09!86;UBERON:0001017!1.74e-09!82;UBERON:0000481!2.39e-09!347;UBERON:0001893!4.69e-09!34;UBERON:0000073!4.96e-09!94;UBERON:0001016!4.96e-09!94;UBERON:0002308!6.63e-09!9;UBERON:0000125!6.63e-09!9;UBERON:0000062!1.36e-08!511;UBERON:0001869!1.66e-08!32;UBERON:0002791!3.37e-08!33;UBERON:0000153!4.06e-08!129;UBERON:0007811!4.06e-08!129;UBERON:0006947!6.09e-08!3;UBERON:0004054!6.09e-08!3;UBERON:0002298!1.17e-07!8;UBERON:0000033!1.69e-07!123;UBERON:0003135!3.76e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.60e-15;33!UBERON:0000160;7.28e-15;17!UBERON:0006947;9.49e-15;3!UBERON:0004054;9.49e-15;3!UBERON:0003135;1.51e-14;11!UBERON:0005409;2.40e-11;22!UBERON:0005904;3.56e-11;4!UBERON:0007023;1.90e-10;114!UBERON:0000059;4.10e-10;11!UBERON:0001829;9.81e-10;2!UBERON:0003101;2.47e-09;22!UBERON:0000079;2.47e-09;22!UBERON:0002108;9.83e-09;4!UBERON:0001155;3.53e-08;9!UBERON:0004175;2.63e-07;21!UBERON:0001555;4.26e-07;54!UBERON:0001044;4.79e-07;6!UBERON:0003293;4.79e-07;6!UBERON:0003294;4.79e-07;6!UBERON:0010047;4.79e-07;6!UBERON:0003408;4.79e-07;6!UBERON:0000167;4.79e-07;6!UBERON:0003978;8.30e-07;3!UBERON:0000946;8.30e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.68e-45,114;UBERON:0000160,7.15e-15,17;UBERON:0006947,9.28e-15,3;UBERON:0004054,9.28e-15,3;UBERON:0003135,1.46e-14,11;UBERON:0005904,3.50e-11,4;UBERON:0000059,3.91e-10,11;UBERON:0005409,6.82e-10,25;UBERON:0001829,9.82e-10,2;UBERON:0003101,2.40e-09,22;UBERON:0000079,2.40e-09,22;UBERON:0004921,5.82e-09,118;UBERON:0002108,1.02e-08,4;UBERON:0001155,3.34e-08,9;UBERON:0003133,1.49e-07,48;UBERON:0001007,1.76e-07,145;UBERON:0001555,1.76e-07,145;UBERON:0007026,1.76e-07,145;UBERON:0005156,4.11e-07,59;UBERON:0000990,4.11e-07,59;UBERON:0001044,4.95e-07,6;UBERON:0003293,4.95e-07,6;UBERON:0003294,4.95e-07,6;UBERON:0010047,4.95e-07,6;UBERON:0000167,4.95e-07,6;UBERON:0003978,7.17e-07,3;UBERON:0009751,7.17e-07,3;UBERON:0000946,7.17e-07,3;UBERON:0002523,7.17e-07,3;UBERON:0005983,7.17e-07,3;UBERON:0002165,7.17e-07,3;UBERON:0002062,7.17e-07,3;UBERON:0007280,7.17e-07,3 | |||
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| ||
|short_description=p3@MYH11 | |||
}} | }} |
Latest revision as of 20:22, 24 September 2015
Short description: | p3@MYH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYH11_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_D10667_5end |
EntrezGene: | MYH11 |
HGNC: | 7569 |
UniProt: | P35749Q7Z7R0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.68e-45 | 114 |
intestine | 7.15e-15 | 17 |
male genital duct | 9.28e-15 | 3 |
internal male genitalia | 9.28e-15 | 3 |
male reproductive organ | 1.46e-14 | 11 |
duct of male reproductive system | 3.50e-11 | 4 |
large intestine | 3.91e-10 | 11 |
gastrointestinal system | 6.82e-10 | 25 |
major salivary gland | 9.82e-10 | 2 |
male organism | 2.40e-09 | 22 |
male reproductive system | 2.40e-09 | 22 |
subdivision of digestive tract | 5.82e-09 | 118 |
small intestine | 1.02e-08 | 4 |
colon | 3.34e-08 | 9 |
reproductive organ | 1.49e-07 | 48 |
digestive system | 1.76e-07 | 145 |
digestive tract | 1.76e-07 | 145 |
primitive gut | 1.76e-07 | 145 |
reproductive structure | 4.11e-07 | 59 |
reproductive system | 4.11e-07 | 59 |
saliva-secreting gland | 4.95e-07 | 6 |
gland of oral region | 4.95e-07 | 6 |
gland of foregut | 4.95e-07 | 6 |
oral gland | 4.95e-07 | 6 |
oral cavity | 4.95e-07 | 6 |
valve | 7.17e-07 | 3 |
cardiac mesenchyme | 7.17e-07 | 3 |
cardial valve | 7.17e-07 | 3 |
tunica intima | 7.17e-07 | 3 |
heart layer | 7.17e-07 | 3 |
endocardium | 7.17e-07 | 3 |
endocardial cushion | 7.17e-07 | 3 |
presumptive endocardium | 7.17e-07 | 3 |