FFCP PHASE1:Hg19::chr4:70361588..70361600,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7363 | |EntrezGene=7363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12553 | |HGNC=12553 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9X8 | |UniProt=G5E9X8 | ||
|association_with_transcript=-9bp_to_ENST00000512583_5end | |association_with_transcript=-9bp_to_ENST00000512583_5end | ||
|cluster_id=chr4:70361588..70361600,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_UGT2B4_5end | |description=CAGE_peak_2_at_UGT2B4_5end | ||
|id=chr4:70361588..70361600,- | |id=chr4:70361588..70361600,- | ||
|ontology_enrichment_celltype=CL:0000181!1.48e-39!12;CL:0000417!1.48e-39!12;CL:0000668!1.48e-39!12;CL:0000414!1.48e-39!12;CL:0000412!1.48e-39!12;CL:0000182!1.48e-39!12;CL:0000223!1.58e-10!59 | |ontology_enrichment_celltype=CL:0000181!1.48e-39!12;CL:0000417!1.48e-39!12;CL:0000668!1.48e-39!12;CL:0000414!1.48e-39!12;CL:0000412!1.48e-39!12;CL:0000182!1.48e-39!12;CL:0000223!1.58e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.40e-33;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.40e-33,12;CL:0000223,2.86e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.90e-21;11!UBERON:0009497;7.43e-18;13!UBERON:0001041;3.97e-08;30!UBERON:0003104;9.77e-08;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.86e-44!19;UBERON:0006925!3.86e-44!19;UBERON:0008836!3.86e-44!19;UBERON:0005057!2.08e-40!26;UBERON:0008835!4.78e-38!22;UBERON:0003894!4.78e-38!22;UBERON:0009854!2.28e-36!23;UBERON:0007499!2.05e-33!25;UBERON:0009497!2.05e-33!25;UBERON:0000015!2.05e-33!25;UBERON:0002423!2.05e-33!25;UBERON:0006235!2.05e-33!25;UBERON:0004161!2.05e-33!25;UBERON:0009856!4.17e-32!26;UBERON:0002365!7.87e-27!31;UBERON:0002330!7.87e-27!31;UBERON:0002368!1.08e-23!35;UBERON:0005172!5.05e-23!55;UBERON:0005173!5.05e-23!55;UBERON:0002417!1.17e-20!61;UBERON:0000916!1.17e-20!61;UBERON:0003929!4.33e-19!54;UBERON:0000949!2.81e-18!45;UBERON:0002530!2.14e-17!59;UBERON:0005911!3.84e-15!82;UBERON:0005177!9.55e-14!107;UBERON:0009569!5.99e-13!113;UBERON:0001041!1.88e-12!98;UBERON:0000466!1.77e-11!126;UBERON:0000077!4.19e-11!130;UBERON:0004921!4.19e-11!129;UBERON:0004185!4.19e-11!129;UBERON:0003914!3.69e-10!118;UBERON:0001007!4.96e-09!155;UBERON:0001555!4.96e-09!155;UBERON:0007026!4.96e-09!155;UBERON:0002405!2.41e-08!115;UBERON:0005256!3.50e-08!143;UBERON:0004119!3.57e-08!169;UBERON:0000925!3.57e-08!169;UBERON:0006595!3.57e-08!169;UBERON:0002100!1.99e-07!216;UBERON:0000025!6.02e-07!194;UBERON:0000490!7.19e-07!138;UBERON:0001048!9.15e-07!168 | |ontology_enrichment_uberon=UBERON:0002107!3.86e-44!19;UBERON:0006925!3.86e-44!19;UBERON:0008836!3.86e-44!19;UBERON:0005057!2.08e-40!26;UBERON:0008835!4.78e-38!22;UBERON:0003894!4.78e-38!22;UBERON:0009854!2.28e-36!23;UBERON:0007499!2.05e-33!25;UBERON:0009497!2.05e-33!25;UBERON:0000015!2.05e-33!25;UBERON:0002423!2.05e-33!25;UBERON:0006235!2.05e-33!25;UBERON:0004161!2.05e-33!25;UBERON:0009856!4.17e-32!26;UBERON:0002365!7.87e-27!31;UBERON:0002330!7.87e-27!31;UBERON:0002368!1.08e-23!35;UBERON:0005172!5.05e-23!55;UBERON:0005173!5.05e-23!55;UBERON:0002417!1.17e-20!61;UBERON:0000916!1.17e-20!61;UBERON:0003929!4.33e-19!54;UBERON:0000949!2.81e-18!45;UBERON:0002530!2.14e-17!59;UBERON:0005911!3.84e-15!82;UBERON:0005177!9.55e-14!107;UBERON:0009569!5.99e-13!113;UBERON:0001041!1.88e-12!98;UBERON:0000466!1.77e-11!126;UBERON:0000077!4.19e-11!130;UBERON:0004921!4.19e-11!129;UBERON:0004185!4.19e-11!129;UBERON:0003914!3.69e-10!118;UBERON:0001007!4.96e-09!155;UBERON:0001555!4.96e-09!155;UBERON:0007026!4.96e-09!155;UBERON:0002405!2.41e-08!115;UBERON:0005256!3.50e-08!143;UBERON:0004119!3.57e-08!169;UBERON:0000925!3.57e-08!169;UBERON:0006595!3.57e-08!169;UBERON:0002100!1.99e-07!216;UBERON:0000025!6.02e-07!194;UBERON:0000490!7.19e-07!138;UBERON:0001048!9.15e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.87e-47;19!UBERON:0006925;7.87e-47;19!UBERON:0002423;1.10e-35;25!UBERON:0002365;6.65e-29;31!UBERON:0002330;6.65e-29;31!UBERON:0002368;1.23e-24;33!UBERON:0000949;2.26e-14;43!UBERON:0005172;6.63e-13;52!UBERON:0005173;6.63e-13;52!UBERON:0002530;7.65e-09;57!UBERON:0002417;9.25e-08;58!UBERON:0000916;9.25e-08;58!UBERON:0001007;2.83e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.56e-47,19;UBERON:0006925,7.56e-47,19;UBERON:0008836,7.56e-47,19;UBERON:0008835,1.63e-40,22;UBERON:0003894,1.63e-40,22;UBERON:0009854,9.04e-39,23;UBERON:0007499,1.07e-35,25;UBERON:0009497,1.07e-35,25;UBERON:0000015,1.07e-35,25;UBERON:0002423,1.07e-35,25;UBERON:0006235,1.07e-35,25;UBERON:0004161,1.07e-35,25;UBERON:0009856,2.44e-34,26;UBERON:0002365,7.46e-29,31;UBERON:0002330,7.46e-29,31;UBERON:0002368,1.37e-25,35;UBERON:0000949,5.84e-20,45;UBERON:0003929,1.15e-16,54;UBERON:0005172,1.15e-16,54;UBERON:0005173,1.15e-16,54;UBERON:0002530,2.86e-15,59;UBERON:0002417,5.11e-15,60;UBERON:0000916,5.11e-15,60;UBERON:0005911,5.08e-11,82;UBERON:0001041,2.16e-10,87;UBERON:0005177,5.87e-09,101;UBERON:0009569,4.44e-08,112;UBERON:0003914,9.83e-08,117;UBERON:0004921,1.33e-07,118;UBERON:0005256,2.04e-07,122 | |||
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|short_description=p2@UGT2B4 | |short_description=p2@UGT2B4 | ||
}} | }} |
Latest revision as of 08:27, 18 September 2015
Short description: | p2@UGT2B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UGT2B4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -9bp_to_ENST00000512583_5end |
EntrezGene: | UGT2B4 |
HGNC: | 12553 |
UniProt: | G5E9X8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.40e-33 | 12 |
endodermal cell | 2.86e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 7.56e-47 | 19 |
digestive gland | 7.56e-47 | 19 |
liver bud | 7.56e-47 | 19 |
hepatic diverticulum | 1.63e-40 | 22 |
liver primordium | 1.63e-40 | 22 |
digestive tract diverticulum | 9.04e-39 | 23 |
epithelial sac | 1.07e-35 | 25 |
epithelium of foregut-midgut junction | 1.07e-35 | 25 |
anatomical boundary | 1.07e-35 | 25 |
hepatobiliary system | 1.07e-35 | 25 |
foregut-midgut junction | 1.07e-35 | 25 |
septum transversum | 1.07e-35 | 25 |
sac | 2.44e-34 | 26 |
exocrine gland | 7.46e-29 | 31 |
exocrine system | 7.46e-29 | 31 |
endocrine gland | 1.37e-25 | 35 |
endocrine system | 5.84e-20 | 45 |
gut epithelium | 1.15e-16 | 54 |
abdomen element | 1.15e-16 | 54 |
abdominal segment element | 1.15e-16 | 54 |
gland | 2.86e-15 | 59 |
abdominal segment of trunk | 5.11e-15 | 60 |
abdomen | 5.11e-15 | 60 |
endo-epithelium | 5.08e-11 | 82 |
foregut | 2.16e-10 | 87 |
trunk region element | 5.87e-09 | 101 |
subdivision of trunk | 4.44e-08 | 112 |
epithelial tube | 9.83e-08 | 117 |
subdivision of digestive tract | 1.33e-07 | 118 |
trunk mesenchyme | 2.04e-07 | 122 |