FFCP PHASE1:Hg19::chr5:1201675..1201683,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340024 | |EntrezGene=340024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27960 | |HGNC=27960 | ||
|TSSclassifier=strong | |||
|UniProt=Q695T7,E9PD72 | |UniProt=Q695T7,E9PD72 | ||
|association_with_transcript=-26bp_to_ENST00000304460,ENST00000515652,NM_001003841,uc003jbw.3_5end | |association_with_transcript=-26bp_to_ENST00000304460,ENST00000515652,NM_001003841,uc003jbw.3_5end | ||
|cluster_id=chr5:1201675..1201683,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_5_at_SLC6A19_5end | |description=CAGE_peak_5_at_SLC6A19_5end | ||
|id=chr5:1201675..1201683,+ | |id=chr5:1201675..1201683,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.62e-17!7;CL:0000586!1.62e-17!7;CL:0000764!1.73e-16!2;CL:0000765!1.73e-16!2;CL:0000050!1.73e-16!2;CL:0000038!1.73e-16!2;CL:0000558!1.73e-16!2;CL:0000547!1.73e-16!2;CL:0000549!1.73e-16!2;CL:0000550!1.73e-16!2;CL:0000552!1.73e-16!2 | |ontology_enrichment_celltype=CL:0000039!1.62e-17!7;CL:0000586!1.62e-17!7;CL:0000764!1.73e-16!2;CL:0000765!1.73e-16!2;CL:0000050!1.73e-16!2;CL:0000038!1.73e-16!2;CL:0000558!1.73e-16!2;CL:0000547!1.73e-16!2;CL:0000549!1.73e-16!2;CL:0000550!1.73e-16!2;CL:0000552!1.73e-16!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.97e-34;1 | |||
|ontology_enrichment_disease=DOID:1799!6.22e-09!1;DOID:10165!6.22e-09!1;DOID:1798!6.22e-09!1;DOID:8552!7.85e-09!1 | |ontology_enrichment_disease=DOID:1799!6.22e-09!1;DOID:10165!6.22e-09!1;DOID:1798!6.22e-09!1;DOID:8552!7.85e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.25e-10!35;UBERON:0000160!9.31e-10!27;UBERON:0002108!1.14e-08!14 | |ontology_enrichment_uberon=UBERON:0005409!6.25e-10!35;UBERON:0000160!9.31e-10!27;UBERON:0002108!1.14e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.35e-59;4!UBERON:0000160;7.91e-30;17!UBERON:0005409;1.64e-23;22!UBERON:0004921;1.08e-13;33!UBERON:0002110;2.74e-12;3!UBERON:0002114;2.74e-12;2!UBERON:0001555;1.04e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.35e-59,4;UBERON:0000160,7.91e-30,17;UBERON:0005409,6.97e-21,25;UBERON:0002110,2.59e-12,3;UBERON:0006242,2.59e-12,3;UBERON:0002114,3.24e-12,2 | |||
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|short_description=p5@SLC6A19 | |short_description=p5@SLC6A19 | ||
}} | }} |
Latest revision as of 22:50, 19 September 2015
Short description: | p5@SLC6A19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC6A19_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -26bp_to_ENST00000304460, ENST00000515652, NM_001003841, uc003jbw.3_5end |
EntrezGene: | SLC6A19 |
HGNC: | 27960 |
UniProt: | Q695T7E9PD72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.35e-59 | 4 |
intestine | 7.91e-30 | 17 |
gastrointestinal system | 6.97e-21 | 25 |
gallbladder | 2.59e-12 | 3 |
gall bladder primordium | 2.59e-12 | 3 |
duodenum | 3.24e-12 | 2 |