FFCP PHASE1:Hg19::chr7:7311029..7311044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000447039_5end | |association_with_transcript=0bp_to_ENST00000447039_5end | ||
|cluster_id=chr7:7311029..7311044,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_1_at_ENST00000447039_5end | |description=CAGE_peak_1_at_ENST00000447039_5end | ||
|id=chr7:7311029..7311044,+ | |id=chr7:7311029..7311044,+ | ||
|ontology_enrichment_celltype=CL:0002541!8.31e-14!3;CL:0002537!7.21e-09!5;CL:0002623!8.27e-07!3 | |ontology_enrichment_celltype=CL:0002541!8.31e-14!3;CL:0002537!7.21e-09!5;CL:0002623!8.27e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.39e-17;3!CL:0000062;5.53e-13;9!CL:0002537;3.04e-11;5!CL:0000349;6.37e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.79e-17,3;CL:0002537,3.04e-11,5;CL:0000349,6.89e-11,19;CL:0000062,9.13e-11,11;CL:0000375,9.13e-11,11;CL:0000335,9.13e-11,11 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.25e-14;1!CL:0000335;9.93e-11;11!UBERON:0008814;2.05e-07;2!UBERON:0010056;2.05e-07;2 | |||
|ontology_enrichment_disease=DOID:3493!5.42e-10!2 | |ontology_enrichment_disease=DOID:3493!5.42e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:12603;5.85e-14;1!DOID:3493;1.20e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,5.85e-14,1;DOID:3493,1.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.06e-14!14;UBERON:0000158!1.06e-14!14;UBERON:0000476!8.31e-14!3;UBERON:0000920!8.31e-14!3;UBERON:0001896!8.68e-14!3;UBERON:0005290!8.68e-14!3;UBERON:0010096!8.68e-14!3;UBERON:0003124!3.95e-10!7;UBERON:0002298!7.46e-09!8;UBERON:0000478!3.67e-08!24;UBERON:0001723!6.18e-07!3;UBERON:0001033!6.18e-07!3;UBERON:0010056!6.18e-07!3;UBERON:0007023!6.72e-07!115 | |ontology_enrichment_uberon=UBERON:0005631!1.06e-14!14;UBERON:0000158!1.06e-14!14;UBERON:0000476!8.31e-14!3;UBERON:0000920!8.31e-14!3;UBERON:0001896!8.68e-14!3;UBERON:0005290!8.68e-14!3;UBERON:0010096!8.68e-14!3;UBERON:0003124!3.95e-10!7;UBERON:0002298!7.46e-09!8;UBERON:0000478!3.67e-08!24;UBERON:0001723!6.18e-07!3;UBERON:0001033!6.18e-07!3;UBERON:0010056!6.18e-07!3;UBERON:0007023!6.72e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.71e-20;10!UBERON:0000158;1.71e-20;10!UBERON:0003124;1.39e-17;3!UBERON:0000920;1.39e-17;3!UBERON:0001896;2.11e-17;3!UBERON:0005290;2.11e-17;3!UBERON:0007029;1.51e-13;1!UBERON:0002298;3.56e-09;6!UBERON:0000478;1.09e-08;24!UBERON:0000305;2.78e-08;7!UBERON:0000341;2.05e-07;2!UBERON:0001474;9.29e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.79e-17,3;UBERON:0001896,2.30e-17,3;UBERON:0005290,2.30e-17,3;UBERON:0010096,2.30e-17,3;UBERON:0005631,1.10e-14,14;UBERON:0000158,1.10e-14,14;UBERON:0007029,1.61e-13,1;UBERON:0002298,3.71e-09,6;UBERON:0000478,1.15e-08,24;UBERON:0000305,2.78e-08,7;UBERON:0003124,5.10e-08,7;UBERON:0000341,1.75e-07,2;UBERON:0004871,2.37e-07,8 | |||
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| ||
|short_description=p1@ENST00000447039 | |short_description=p1@ENST00000447039 | ||
}} | }} |
Latest revision as of 11:28, 31 July 2015
Short description: | p1@ENST00000447039 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000447039_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000447039_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.79e-17 | 3 |
amnion mesenchymal stem cell | 3.04e-11 | 5 |
extraembryonic cell | 6.89e-11 | 19 |
osteoblast | 9.13e-11 | 11 |
osteoprogenitor cell | 9.13e-11 | 11 |
mesenchyme condensation cell | 9.13e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.79e-17 | 3 |
medulla oblongata | 2.30e-17 | 3 |
myelencephalon | 2.30e-17 | 3 |
future myelencephalon | 2.30e-17 | 3 |
extraembryonic membrane | 1.10e-14 | 14 |
membranous layer | 1.10e-14 | 14 |
surface | 1.61e-13 | 1 |
brainstem | 3.71e-09 | 6 |
extraembryonic structure | 1.15e-08 | 24 |
amnion | 2.78e-08 | 7 |
chorion | 5.10e-08 | 7 |
throat | 1.75e-07 | 2 |
somatic layer of lateral plate mesoderm | 2.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.85e-14 | 1 |
signet ring cell adenocarcinoma | 1.20e-07 | 2 |