FFCP PHASE1:Hg19::chr7:76139833..76139844,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80761 | |EntrezGene=80761 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21444 | |HGNC=21444 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BT76 | |UniProt=Q9BT76 | ||
|association_with_transcript=0bp_to_ENST00000257632_5end | |association_with_transcript=0bp_to_ENST00000257632_5end | ||
|cluster_id=chr7:76139833..76139844,+ | |||
|coexpression_cluster_id=C1193 | |||
|description=CAGE_peak_5_at_UPK3B_5end | |description=CAGE_peak_5_at_UPK3B_5end | ||
|id=chr7:76139833..76139844,+ | |id=chr7:76139833..76139844,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.17e-15!254;CL:0000077!1.04e-09!19;CL:0000076!1.79e-08!62 | |ontology_enrichment_celltype=CL:0000066!1.17e-15!254;CL:0000077!1.04e-09!19;CL:0000076!1.79e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.18e-16;19!CL:0002586;1.61e-13;3!CL:0000149;3.03e-10;4!CL:0000244;1.97e-09;4!CL:0000731;1.97e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.24e-16,19;CL:0002586,1.55e-13,3;CL:0000149,2.94e-10,4;CL:0000066,1.22e-09,253;CL:0000244,1.84e-09,4;CL:0000731,1.84e-09,4;CL:0000076,3.70e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.26e-11!106;DOID:0050687!1.26e-08!143;DOID:299!3.93e-08!25 | |ontology_enrichment_disease=DOID:305!4.26e-11!106;DOID:0050687!1.26e-08!143;DOID:299!3.93e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:114;1.10e-08;2!DOID:299;4.42e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.21e-08,2;DOID:299,4.00e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.01e-10!169;UBERON:0000925!9.01e-10!169;UBERON:0006595!9.01e-10!169;UBERON:0005177!1.05e-09!107;UBERON:0001007!1.43e-07!155;UBERON:0001555!1.43e-07!155;UBERON:0007026!1.43e-07!155;UBERON:0002075!1.64e-07!18;UBERON:0000464!2.01e-07!104;UBERON:0004921!2.86e-07!129;UBERON:0004185!2.86e-07!129;UBERON:0000966!3.20e-07!5;UBERON:0005388!3.20e-07!5;UBERON:0001802!3.20e-07!5;UBERON:0005409!4.17e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!9.01e-10!169;UBERON:0000925!9.01e-10!169;UBERON:0006595!9.01e-10!169;UBERON:0005177!1.05e-09!107;UBERON:0001007!1.43e-07!155;UBERON:0001555!1.43e-07!155;UBERON:0007026!1.43e-07!155;UBERON:0002075!1.64e-07!18;UBERON:0000464!2.01e-07!104;UBERON:0004921!2.86e-07!129;UBERON:0004185!2.86e-07!129;UBERON:0000966!3.20e-07!5;UBERON:0005388!3.20e-07!5;UBERON:0001802!3.20e-07!5;UBERON:0005409!4.17e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.61e-13;3!UBERON:0001782;1.61e-13;3!UBERON:0000966;2.85e-08;5!UBERON:0005388;2.85e-08;5!UBERON:0001802;2.85e-08;5!UBERON:0000365;1.25e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.55e-13,3;UBERON:0005424,1.55e-13,3;UBERON:0001781,2.94e-10,4;UBERON:0000365,1.18e-07,5;UBERON:0000966,5.84e-07,6;UBERON:0005388,5.84e-07,6;UBERON:0001802,5.84e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0.619264493264304,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,1.76821751921912,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29443676311203,0,0,0,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0,0,0,0,5.3504621473082,2.94017422771084,0,0,0,0,0.368965315629341,0,0.329250856225877,1.1240175325762,0.301586917234893,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4546963282643,3.48613383440118,30.3917893193453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,1.50506932156456,0,0,0,0,0,12.0531558804703,20.3369080333818,5.53143270929315,0.103041011647722,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0.670302275535787,1.08890984861323,0,2.58303223602738,0,3.54744122829341,1.37834040124176,0,0,0,0,0,0,0,0,0.427296284509893,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0.23874448473769,11.5816225524729,8.6004996587785,0,0,0,0,0.211125408127993,0.996239941255349,0.276283915531148,0,0.102268682502155,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,3.07303986298317,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,15.507116775119,0,0,0,0.442287822516696,0,0,0,0,0,6.42062117839031,0,0,1.36965233252463,0.242780379534093,0,0,0,0.063186579628488,0,0,0.664653872707185,0.330991955875499,0.941798755221676,0,0.569219092059585,0,2.77695581336209,1.95984794828755,0.0870592065804026,0.34945333648406,0.171986032471617,0,0.146178634172371,0.164230914106418,0.484945082442097,0,0,0,0,0,0.391102765469606,0.64127056201227,0.213452994739353,1.9980960958213,2.3054466744657,0,0,0,0,0.235694034616795,1.49494626680975,2.510468311496,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,2.39614800598789,1.28767814440971,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,11.9506212697732,0,0,0,0,0,0,0,0,0,0,0,1.02652102730598,0.704815022316672,2.99004755189545,0.78602152549833,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.310525913752519,0,0,0,0.751288044986092,1.14241563650639,0,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,7.07657251537255,6.26386300716508,0,0,0,0,32.4241519519021,21.709120908292,0,39.1615497689957,5.23721566024525,0.512483037175893,0.345430341731199,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,1.02315497042921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0.183428598521679,0,0,0,0,1.27857558193737,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.945550727071746,0.111231401892069,0.078493092850514,0,0,0.913158720509496,3.45484145949794,0,0.0714765441766563,0.158013611732727,0.23248285073625,0,0,0,0,0,0,0,0,0,3.89481676524885,0,0,13.0870855203417,0.196300467230486,8.90000852370567,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0.588925401344836,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0.26940821205835,0,0,0.244209805832924,0.426909383510862,0,0.269475606319761,2.34640942403454,0,0,0,1.40891655513718,0 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| ||
|short_description=p5@UPK3B | |short_description=p5@UPK3B | ||
}} | }} |
Latest revision as of 14:05, 19 September 2015
Short description: | p5@UPK3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UPK3B_5end |
Coexpression cluster: | C1193_mesothelioma_Mesothelial_Retinal_clear_amniotic_serous_Urothelial |
Association with transcript: | 0bp_to_ENST00000257632_5end |
EntrezGene: | UPK3B |
HGNC: | 21444 |
UniProt: | Q9BT76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.24e-16 | 19 |
retinal pigment epithelial cell | 1.55e-13 | 3 |
visual pigment cell | 2.94e-10 | 4 |
epithelial cell | 1.22e-09 | 253 |
transitional epithelial cell | 1.84e-09 | 4 |
urothelial cell | 1.84e-09 | 4 |
squamous epithelial cell | 3.70e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.55e-13 | 3 |
presumptive retinal pigmented epithelium | 1.55e-13 | 3 |
layer of retina | 2.94e-10 | 4 |
urothelium | 1.18e-07 | 5 |
retina | 5.84e-07 | 6 |
photoreceptor array | 5.84e-07 | 6 |
posterior segment of eyeball | 5.84e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.21e-08 | 2 |
adenocarcinoma | 4.00e-07 | 25 |