FFCP PHASE1:Hg19::chr10:102268607..102268622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25956 | |EntrezGene=25956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23197 | |HGNC=23197 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-57bp_to_ENST00000484848,uc001krg.1_5end | |association_with_transcript=-57bp_to_ENST00000484848,uc001krg.1_5end | ||
|cluster_id=chr10:102268607..102268622,- | |||
|coexpression_cluster_id=C1100 | |||
|description=CAGE_peak_4_at_SEC31B_5end | |description=CAGE_peak_4_at_SEC31B_5end | ||
|id=chr10:102268607..102268622,- | |id=chr10:102268607..102268622,- | ||
|ontology_enrichment_celltype=CL:0000084!1.20e-38!25;CL:0000827!1.20e-38!25;CL:0000838!8.46e-17!52;CL:0000542!2.03e-16!53;CL:0000051!2.03e-16!53;CL:0000791!2.96e-15!18;CL:0000789!2.96e-15!18;CL:0002420!2.96e-15!18;CL:0002419!2.96e-15!18;CL:0000790!2.96e-15!18;CL:0000625!1.84e-14!11;CL:0000080!1.35e-12!6 | |ontology_enrichment_celltype=CL:0000084!1.20e-38!25;CL:0000827!1.20e-38!25;CL:0000838!8.46e-17!52;CL:0000542!2.03e-16!53;CL:0000051!2.03e-16!53;CL:0000791!2.96e-15!18;CL:0000789!2.96e-15!18;CL:0002420!2.96e-15!18;CL:0002419!2.96e-15!18;CL:0000790!2.96e-15!18;CL:0000625!1.84e-14!11;CL:0000080!1.35e-12!6 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.08e-14;1!CL:0000911;3.08e-14;1!CL:0000814;3.08e-14;1!CL:0000084;1.58e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.08e-14,1;CL:0000914,3.08e-14,1;CL:0000911,3.08e-14,1;CL:0000814,3.08e-14,1;CL:0002042,3.08e-14,1;CL:0002039,3.08e-14,1;CL:0002040,3.08e-14,1;CL:0002041,3.08e-14,1;CL:0000084,1.70e-12,25;CL:0000827,1.70e-12,25;CL:0000893,9.25e-08,2;CL:0002489,9.25e-08,2;CL:0000809,9.25e-08,2;CL:0000808,9.25e-08,2;CL:0000894,9.25e-08,2;CL:0000806,9.25e-08,2;CL:0000807,9.25e-08,2;CL:0000805,9.25e-08,2;CL:0002425,9.25e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002425;9.25e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!8.12e-08!10 | |ontology_enrichment_disease=DOID:0060058!8.12e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;6.87e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.00e-12,10;DOID:2531,1.57e-08,51;DOID:0060083,1.57e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.88e-11!4;UBERON:0005058!1.88e-11!4;UBERON:0009113!1.88e-11!4;UBERON:0003295!1.88e-11!4;UBERON:0005562!1.88e-11!4;UBERON:0004177!6.19e-11!7;UBERON:0003351!9.01e-08!6;UBERON:0001042!1.22e-07!10;UBERON:0009145!1.22e-07!10;UBERON:0000178!1.86e-07!15;UBERON:0000179!1.86e-07!15;UBERON:0000463!1.86e-07!15;UBERON:0006562!6.00e-07!11 | |ontology_enrichment_uberon=UBERON:0002370!1.88e-11!4;UBERON:0005058!1.88e-11!4;UBERON:0009113!1.88e-11!4;UBERON:0003295!1.88e-11!4;UBERON:0005562!1.88e-11!4;UBERON:0004177!6.19e-11!7;UBERON:0003351!9.01e-08!6;UBERON:0001042!1.22e-07!10;UBERON:0009145!1.22e-07!10;UBERON:0000178!1.86e-07!15;UBERON:0000179!1.86e-07!15;UBERON:0000463!1.86e-07!15;UBERON:0006562!6.00e-07!11 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@SEC31B | |short_description=p4@SEC31B | ||
}} | }} |
Latest revision as of 21:47, 15 September 2015
Short description: | p4@SEC31B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEC31B_5end |
Coexpression cluster: | C1100_CD4_NK_anaplastic_acute_Hodgkin_adult_cord |
Association with transcript: | -57bp_to_ENST00000484848, uc001krg.1_5end |
EntrezGene: | SEC31B |
HGNC: | 23197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.08e-14 | 1 |
immature NK T cell | 3.08e-14 | 1 |
effector T cell | 3.08e-14 | 1 |
mature NK T cell | 3.08e-14 | 1 |
immature NK T cell stage IV | 3.08e-14 | 1 |
immature NK T cell stage I | 3.08e-14 | 1 |
immature NK T cell stage II | 3.08e-14 | 1 |
immature NK T cell stage III | 3.08e-14 | 1 |
T cell | 1.70e-12 | 25 |
pro-T cell | 1.70e-12 | 25 |
thymocyte | 9.25e-08 | 2 |
double negative thymocyte | 9.25e-08 | 2 |
double-positive, alpha-beta thymocyte | 9.25e-08 | 2 |
DN4 thymocyte | 9.25e-08 | 2 |
DN1 thymic pro-T cell | 9.25e-08 | 2 |
DN2 thymocyte | 9.25e-08 | 2 |
DN3 thymocyte | 9.25e-08 | 2 |
immature single positive thymocyte | 9.25e-08 | 2 |
early T lineage precursor | 9.25e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.00e-12 | 10 |
hematologic cancer | 1.57e-08 | 51 |
immune system cancer | 1.57e-08 | 51 |