FFCP PHASE1:Hg19::chr8:145642053..145642060,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:145642053..145642060,+ | |||
|description=CAGE_peak_at_chr8:145642053..145642060,+ | |description=CAGE_peak_at_chr8:145642053..145642060,+ | ||
|id=chr8:145642053..145642060,+ | |id=chr8:145642053..145642060,+ | ||
|ontology_enrichment_celltype=CL:0000039!6.88e-12!7;CL:0000586!6.88e-12!7;CL:0000066!8.57e-07!254 | |ontology_enrichment_celltype=CL:0000039!6.88e-12!7;CL:0000586!6.88e-12!7;CL:0000066!8.57e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.20e-11;12!CL:0002537;3.51e-10;5!CL:0000349;9.44e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.31e-11,12;CL:0002537,4.25e-10,5;CL:0000349,9.84e-10,19 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.91e-12;11!UBERON:0009497;2.44e-10;13!UBERON:0001041;5.46e-08;30 | |||
|ontology_enrichment_disease=DOID:305!5.44e-09!106 | |ontology_enrichment_disease=DOID:305!5.44e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.13e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.19e-11,2;DOID:305,2.78e-08,106;DOID:1799,9.79e-07,1;DOID:10165,9.79e-07,1;DOID:1798,9.79e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.15e-14!169;UBERON:0000925!1.15e-14!169;UBERON:0006595!1.15e-14!169;UBERON:0005631!2.30e-13!14;UBERON:0000158!2.30e-13!14;UBERON:0001007!5.11e-12!155;UBERON:0001555!5.11e-12!155;UBERON:0007026!5.11e-12!155;UBERON:0005409!2.70e-11!35;UBERON:0004921!2.95e-11!129;UBERON:0004185!2.95e-11!129;UBERON:0000160!3.58e-11!27;UBERON:0005911!1.39e-09!82;UBERON:0000305!3.39e-09!7;UBERON:0000059!1.94e-08!11;UBERON:0000077!2.65e-08!130;UBERON:0004871!5.46e-08!8;UBERON:0009856!5.89e-08!26;UBERON:0003929!1.30e-07!54;UBERON:0000466!4.29e-07!126;UBERON:0000478!4.99e-07!24;UBERON:0007499!9.30e-07!25 | |ontology_enrichment_uberon=UBERON:0004119!1.15e-14!169;UBERON:0000925!1.15e-14!169;UBERON:0006595!1.15e-14!169;UBERON:0005631!2.30e-13!14;UBERON:0000158!2.30e-13!14;UBERON:0001007!5.11e-12!155;UBERON:0001555!5.11e-12!155;UBERON:0007026!5.11e-12!155;UBERON:0005409!2.70e-11!35;UBERON:0004921!2.95e-11!129;UBERON:0004185!2.95e-11!129;UBERON:0000160!3.58e-11!27;UBERON:0005911!1.39e-09!82;UBERON:0000305!3.39e-09!7;UBERON:0000059!1.94e-08!11;UBERON:0000077!2.65e-08!130;UBERON:0004871!5.46e-08!8;UBERON:0009856!5.89e-08!26;UBERON:0003929!1.30e-07!54;UBERON:0000466!4.29e-07!126;UBERON:0000478!4.99e-07!24;UBERON:0007499!9.30e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.25e-22;22!UBERON:0000160;5.79e-19;17!UBERON:0005631;2.86e-13;10!UBERON:0000158;2.86e-13;10!UBERON:0004921;3.08e-13;33!UBERON:0000059;1.28e-12;11!UBERON:0000305;2.08e-12;7!UBERON:0002108;5.75e-11;4!UBERON:0002107;9.99e-10;19!UBERON:0006925;9.99e-10;19!UBERON:0002423;1.02e-09;25!UBERON:0000478;1.34e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.34e-20,25;UBERON:0000160,5.02e-19,17;UBERON:0005631,2.07e-13,14;UBERON:0000158,2.07e-13,14;UBERON:0000059,1.15e-12,11;UBERON:0000305,2.35e-12,7;UBERON:0004921,4.53e-11,118;UBERON:0002108,5.48e-11,4;UBERON:0004871,7.90e-11,8;UBERON:0002107,9.99e-10,19;UBERON:0006925,9.99e-10,19;UBERON:0008836,9.99e-10,19;UBERON:0009497,1.03e-09,25;UBERON:0000015,1.03e-09,25;UBERON:0002423,1.03e-09,25;UBERON:0006235,1.03e-09,25;UBERON:0004161,1.03e-09,25;UBERON:0007499,1.14e-09,25;UBERON:0001007,1.88e-09,145;UBERON:0001555,1.88e-09,145;UBERON:0007026,1.88e-09,145;UBERON:0004119,2.55e-09,160;UBERON:0000925,2.55e-09,160;UBERON:0006595,2.55e-09,160;UBERON:0009856,2.90e-09,26;UBERON:0008835,2.54e-08,22;UBERON:0003894,2.54e-08,22;UBERON:0009854,6.18e-08,23;UBERON:0000478,1.38e-07,24 | |||
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| ||
|short_description=p@chr8:145642053..145642060,+ | |short_description=p@chr8:145642053..145642060,+ | ||
}} | }} |
Latest revision as of 16:12, 31 July 2015
Short description: | p@chr8:145642053..145642060, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:145642053..145642060, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.31e-11 | 12 |
amnion mesenchymal stem cell | 4.25e-10 | 5 |
extraembryonic cell | 9.84e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.34e-20 | 25 |
intestine | 5.02e-19 | 17 |
extraembryonic membrane | 2.07e-13 | 14 |
membranous layer | 2.07e-13 | 14 |
large intestine | 1.15e-12 | 11 |
amnion | 2.35e-12 | 7 |
subdivision of digestive tract | 4.53e-11 | 118 |
small intestine | 5.48e-11 | 4 |
somatic layer of lateral plate mesoderm | 7.90e-11 | 8 |
liver | 9.99e-10 | 19 |
digestive gland | 9.99e-10 | 19 |
liver bud | 9.99e-10 | 19 |
epithelium of foregut-midgut junction | 1.03e-09 | 25 |
anatomical boundary | 1.03e-09 | 25 |
hepatobiliary system | 1.03e-09 | 25 |
foregut-midgut junction | 1.03e-09 | 25 |
septum transversum | 1.03e-09 | 25 |
epithelial sac | 1.14e-09 | 25 |
digestive system | 1.88e-09 | 145 |
digestive tract | 1.88e-09 | 145 |
primitive gut | 1.88e-09 | 145 |
endoderm-derived structure | 2.55e-09 | 160 |
endoderm | 2.55e-09 | 160 |
presumptive endoderm | 2.55e-09 | 160 |
sac | 2.90e-09 | 26 |
hepatic diverticulum | 2.54e-08 | 22 |
liver primordium | 2.54e-08 | 22 |
digestive tract diverticulum | 6.18e-08 | 23 |
extraembryonic structure | 1.38e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.19e-11 | 2 |
carcinoma | 2.78e-08 | 106 |
islet cell tumor | 9.79e-07 | 1 |
endocrine pancreas cancer | 9.79e-07 | 1 |
pancreatic endocrine carcinoma | 9.79e-07 | 1 |