FFCP PHASE1:Hg19::chr16:87425381..87425393,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:87425381..87425393,+
|short_description=p8@MAP1LC3B
|description=CAGE_peak_8_at_MAP1LC3B_5end
|association_with_transcript=-12bp_to_ENST00000268607_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81631 | |EntrezGene=81631 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13352 | |HGNC=13352 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZQ8 | |UniProt=Q9GZQ8 | ||
|association_with_transcript=-12bp_to_ENST00000268607_5end | |||
|cluster_id=chr16:87425381..87425393,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_8_at_MAP1LC3B_5end | |||
|id=chr16:87425381..87425393,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.83e-33!45;CL:0002057!1.80e-31!42;CL:0002009!1.17e-25!65;CL:0002194!1.08e-24!63;CL:0000576!1.08e-24!63;CL:0000040!1.08e-24!63;CL:0000559!1.08e-24!63;CL:0000766!3.65e-24!76;CL:0000557!9.43e-23!71;CL:0000839!2.21e-21!70;CL:0000763!8.40e-17!112;CL:0000049!8.40e-17!112;CL:0000738!2.23e-13!140;CL:0002087!6.95e-13!119;CL:0002031!4.00e-11!124;CL:0000988!8.26e-11!182;CL:0000037!1.68e-10!172;CL:0000566!1.68e-10!172;CL:0002032!8.72e-10!165;CL:0000837!8.72e-10!165;CL:0002393!4.52e-09!9;CL:0002397!4.52e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0002393;5.76e-13;6!CL:0002397;5.76e-13;6!CL:0000346;2.63e-07;3!CL:1000428;2.63e-07;3!CL:0002567;2.63e-07;3!CL:0002592;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,6.36e-09,9;CL:0002397,6.36e-09,9;CL:0002592,2.19e-07,3;CL:0000346,2.32e-07,3;CL:1000428,2.32e-07,3;CL:0002567,2.97e-07,3;CL:0000860,3.71e-07,42;CL:0002057,3.71e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.52e-08;10!UBERON:0005564;2.52e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.23e-19!80;UBERON:0002390!3.71e-19!102;UBERON:0003061!3.71e-19!102;UBERON:0001474!2.81e-17!86;UBERON:0002193!1.44e-16!112;UBERON:0004765!1.82e-13!101;UBERON:0001434!1.82e-13!101;UBERON:0002405!1.03e-11!115;UBERON:0003081!2.34e-09!216;UBERON:0002204!6.54e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.52e-10;8!UBERON:0003135;1.20e-07;11!UBERON:0003498;2.63e-07;3!UBERON:0005985;2.63e-07;3!UBERON:0000412;2.63e-07;3!UBERON:0001621;2.63e-07;3!UBERON:0001992;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.52e-10,8;UBERON:0003135,1.20e-07,11;UBERON:0001621,2.19e-07,3;UBERON:0000412,2.32e-07,3;UBERON:0001992,2.32e-07,3 | |||
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| ||
|short_description=p8@MAP1LC3B | |||
}} | }} |
Latest revision as of 07:39, 18 September 2015
Short description: | p8@MAP1LC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MAP1LC3B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -12bp_to_ENST00000268607_5end |
EntrezGene: | MAP1LC3B |
HGNC: | 13352 |
UniProt: | Q9GZQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 6.36e-09 | 9 |
CD14-positive, CD16-positive monocyte | 6.36e-09 | 9 |
smooth muscle cell of the coronary artery | 2.19e-07 | 3 |
hair follicle dermal papilla cell | 2.32e-07 | 3 |
stem cell of epidermis | 2.32e-07 | 3 |
light melanocyte | 2.97e-07 | 3 |
classical monocyte | 3.71e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.71e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
testis | 3.52e-10 | 8 |
male reproductive organ | 1.20e-07 | 11 |
coronary artery | 2.19e-07 | 3 |
dermal papilla | 2.32e-07 | 3 |
papillary layer of dermis | 2.32e-07 | 3 |