FFCP PHASE1:Hg19::chr9:106856558..106856634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10592 | |EntrezGene=10592 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14011 | |HGNC=14011 | ||
|TSSclassifier=strong | |||
|UniProt=O95347,Q5T821 | |UniProt=O95347,Q5T821 | ||
|association_with_transcript=0bp_to_ENST00000374793,ENST00000440179,uc010mtg.1,uc010mth.1_5end | |association_with_transcript=0bp_to_ENST00000374793,ENST00000440179,uc010mtg.1,uc010mth.1_5end | ||
|cluster_id=chr9:106856558..106856634,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_SMC2_5end | |description=CAGE_peak_1_at_SMC2_5end | ||
|id=chr9:106856558..106856634,+ | |id=chr9:106856558..106856634,+ | ||
|ontology_enrichment_celltype=CL:0002319!5.64e-07!25 | |ontology_enrichment_celltype=CL:0002319!5.64e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;7.15e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.27e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.52e-53!235;DOID:14566!5.67e-52!239;DOID:0050686!2.81e-26!137;DOID:0050687!6.08e-25!143;DOID:2531!1.04e-20!51;DOID:0060083!1.04e-20!51;DOID:305!9.36e-19!106;DOID:1240!4.09e-16!39;DOID:8692!5.44e-12!31 | |ontology_enrichment_disease=DOID:162!1.52e-53!235;DOID:14566!5.67e-52!239;DOID:0050686!2.81e-26!137;DOID:0050687!6.08e-25!143;DOID:2531!1.04e-20!51;DOID:0060083!1.04e-20!51;DOID:305!9.36e-19!106;DOID:1240!4.09e-16!39;DOID:8692!5.44e-12!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;9.59e-13;39!DOID:2531;1.02e-12;51!DOID:0060083;1.02e-12;51!DOID:8692;1.19e-11;31!DOID:0050686;3.42e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.45e-53,235;DOID:14566,4.96e-52,239;DOID:0050686,2.75e-26,137;DOID:0050687,5.95e-25,143;DOID:2531,1.02e-20,51;DOID:0060083,1.02e-20,51;DOID:305,9.22e-19,106;DOID:1240,4.04e-16,39;DOID:8692,5.39e-12,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@SMC2 | |short_description=p1@SMC2 | ||
}} | }} |
Latest revision as of 22:45, 19 September 2015
Short description: | p1@SMC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMC2_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000374793, ENST00000440179, uc010mtg.1, uc010mth.1_5end |
EntrezGene: | SMC2 |
HGNC: | 14011 |
UniProt: | O95347Q5T821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.27e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.45e-53 | 235 |
disease of cellular proliferation | 4.96e-52 | 239 |
organ system cancer | 2.75e-26 | 137 |
cell type cancer | 5.95e-25 | 143 |
hematologic cancer | 1.02e-20 | 51 |
immune system cancer | 1.02e-20 | 51 |
carcinoma | 9.22e-19 | 106 |
leukemia | 4.04e-16 | 39 |
myeloid leukemia | 5.39e-12 | 31 |