FFCP PHASE1:Hg19::chr9:137582780..137582797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1289 | |EntrezGene=1289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2209 | |HGNC=2209 | ||
|TSSclassifier=strong | |||
|UniProt=Q59EE7 | |UniProt=Q59EE7 | ||
|association_with_transcript=0bp_to_AB209864_5end | |association_with_transcript=0bp_to_AB209864_5end | ||
|cluster_id=chr9:137582780..137582797,+ | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_11_at_COL5A1_5end | |description=CAGE_peak_11_at_COL5A1_5end | ||
|id=chr9:137582780..137582797,+ | |id=chr9:137582780..137582797,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.44e-21!180;CL:0000057!1.44e-13!75;CL:0000222!1.97e-09!119;CL:0000680!1.66e-08!57;CL:0000056!1.66e-08!57;CL:0000355!1.66e-08!57;CL:0000183!2.18e-08!59;CL:0000187!3.46e-08!54;CL:0002494!4.95e-07!16 | |ontology_enrichment_celltype=CL:0000055!3.44e-21!180;CL:0000057!1.44e-13!75;CL:0000222!1.97e-09!119;CL:0000680!1.66e-08!57;CL:0000056!1.66e-08!57;CL:0000355!1.66e-08!57;CL:0000183!2.18e-08!59;CL:0000187!3.46e-08!54;CL:0002494!4.95e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.59e-15;19!CL:0000134;1.68e-11;55!CL:0000048;1.62e-09;58!CL:0002569;2.67e-09;6!CL:0000723;3.41e-09;61!CL:0000034;1.29e-07;69!CL:0002570;6.00e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.06e-15,19;CL:0000057,1.05e-11,76;CL:0002569,3.10e-09,6;CL:0000048,3.77e-08,427;CL:0000723,1.00e-07,433;CL:0000034,3.49e-07,441;CL:0002320,3.82e-07,361;CL:0002570,6.26e-07,8;CL:0000134,6.85e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.59e-11!84;UBERON:0002385!1.16e-08!63;UBERON:0001015!1.16e-08!63;UBERON:0000383!1.16e-08!63;UBERON:0004535!1.40e-08!110;UBERON:0000478!1.83e-08!24;UBERON:0001134!2.29e-08!61;UBERON:0002036!2.29e-08!61;UBERON:0003082!2.29e-08!61;UBERON:0003914!4.95e-08!118;UBERON:0002049!5.23e-08!79;UBERON:0007798!5.23e-08!79;UBERON:0001009!7.14e-08!113;UBERON:0000914!1.20e-07!83;UBERON:0002329!1.20e-07!83;UBERON:0003077!1.20e-07!83;UBERON:0003059!1.20e-07!83;UBERON:0007282!1.20e-07!83;UBERON:0009618!1.20e-07!83;UBERON:0007285!1.20e-07!83;UBERON:0005631!1.21e-07!14;UBERON:0000158!1.21e-07!14;UBERON:0004290!2.73e-07!70;UBERON:0000948!9.21e-07!24;UBERON:0005498!9.21e-07!24;UBERON:0004140!9.21e-07!24;UBERON:0009881!9.21e-07!24;UBERON:0004141!9.21e-07!24;UBERON:0003084!9.21e-07!24;UBERON:0007005!9.21e-07!24;UBERON:0004139!9.21e-07!24;UBERON:0004291!9.21e-07!24 | |ontology_enrichment_uberon=UBERON:0004872!1.59e-11!84;UBERON:0002385!1.16e-08!63;UBERON:0001015!1.16e-08!63;UBERON:0000383!1.16e-08!63;UBERON:0004535!1.40e-08!110;UBERON:0000478!1.83e-08!24;UBERON:0001134!2.29e-08!61;UBERON:0002036!2.29e-08!61;UBERON:0003082!2.29e-08!61;UBERON:0003914!4.95e-08!118;UBERON:0002049!5.23e-08!79;UBERON:0007798!5.23e-08!79;UBERON:0001009!7.14e-08!113;UBERON:0000914!1.20e-07!83;UBERON:0002329!1.20e-07!83;UBERON:0003077!1.20e-07!83;UBERON:0003059!1.20e-07!83;UBERON:0007282!1.20e-07!83;UBERON:0009618!1.20e-07!83;UBERON:0007285!1.20e-07!83;UBERON:0005631!1.21e-07!14;UBERON:0000158!1.21e-07!14;UBERON:0004290!2.73e-07!70;UBERON:0000948!9.21e-07!24;UBERON:0005498!9.21e-07!24;UBERON:0004140!9.21e-07!24;UBERON:0009881!9.21e-07!24;UBERON:0004141!9.21e-07!24;UBERON:0003084!9.21e-07!24;UBERON:0007005!9.21e-07!24;UBERON:0004139!9.21e-07!24;UBERON:0004291!9.21e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.32e-11;24!UBERON:0003104;1.42e-10;7!UBERON:0009142;1.42e-10;7!UBERON:0003422;2.67e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,2.84e-11,24;UBERON:0003422,3.10e-09,6;UBERON:0005631,1.11e-07,14;UBERON:0000158,1.11e-07,14;UBERON:0002384,3.00e-07,371 | |||
|phase1_expression=1.2717486548939,2.99740733447376,0.986680828671798,3.00219895059391,2.68176656656373,4.36169262050184,5.06599756336621,0,0,0,1.39560233594486,1.31064823278103,1.84636884759917,0,0.662794751455832,1.34465029290355,2.41077811209591,0.730310090387373,0.487932798790507,0.123121058076788,1.63200552995402,0.626909442956176,0,0.547497700291537,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.767175371061182,0.722878304769133,1.00267582127178,2.462390822334,0,8.75942766544745,0.0945348171640679,1.55210578223795,0.87834785693126,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,1.69592382577203,0,1.6507082516404,0.417989933073621,0,0,0.33472061276467,0,0,0.24406205754817,0,4.0507097394088,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,0,0,0,3.97577561356255,0.886413581652058,0.264818361626438,6.3104056564739,0.709336764396714,2.80338800071154,1.06748995729705,4.44001587150888,0.311211035399766,0.67355336034844,0.653847612453835,1.66493170409425,2.30470369792,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.413303124703062,0,1.97813543422845,0,2.15585442544872,0,0.375355559615893,0,0.877955241761676,2.14541457059314,0.600952235626387,0.567160915800105,2.69084453533293,1.49490172172997,1.27159140695737,1.50045548042201,0.618315175430633,0.772921620136887,0.18611685633159,1.18143432568886,1.26668106709558,3.02920529092937,1.01254888506529,1.61646056818812,3.90510551768276,1.41052937518696,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,1.44375896333917,0.473227200159376,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0.738155454624648,1.40241773803446,0.4115740113314,10.2906097969879,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,1.17408694235822,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0.43596006883328,0.22001485746285,1.55126058909333,3.57656445851882,2.535908257668,0.531876233169741,0,0,0,0,2.28764789853036,6.51145926469732,2.46972101034231,0,1.06617584622764,4.75171123760058,0.301439377059586,0,0.499864955910285,0,0,0,1.19812427745791,3.44585807502342,0,1.59259437334337,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,4.99130067673937,10.5273103390325,1.89242898040722,1.7571212248907,1.20378439891088,2.27407504055985,1.03473071292505,0.664225598535437,1.47495334833363,0.173767228936166,0.195801157462741,2.05886054286514,0,0,0.106727557803444,1.5156378572313,4.99306318531491,5.44302527993425,0.992431231275107,1.99500565274481,5.61320188866147,1.92208723883551,0.511707249066704,3.21707842287215,0,1.3878872442239,1.24293207719189,0.164254312027618,1.03850885836724,1.04589340613963,0,0,0,0.68888668898764,0.546273504020151,1.44236856455367,0,0,0,0,0.105551628892876,0,0,0,3.08454505380579,0,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0,0,0.732555718546747,0.660075999364704,0,0,0,0,0.308097234229289,0.921022048356777,0.551346289938122,0.429680979473094,1.0151168573996,0.340906509664404,0.267096106940212,0,0.384380134730212,0.127612712494584,0,1.39453664789186,6.61105928344344,0,0,0,0,0,0.143124886741991,0.372158369359667,1.2655176988749,0.953150969619124,0,0.855877976067841,0.318203247925937,0,0.359744915166629,2.47083326762449,0.824686816419805,0,1.58510321173008,0.421258456238981,0,0.243713489631284,2.11300293513511,0.409499734223957,1.41405431953713,0,0,1.99031692572366,0,0.578775534266688,0.655894752046633,0.202910376962704,0.6196469961995,0.281695602532241,0.573645408816206,1.3754865741837,1.07001315444375,0.709522128141196,0.844430541190656,1.31717957183961,0.379473173765715,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,3.58116727106535,0.593929361665277,1.84296421259539,0,0,0,0,0,0.796991953004279,0,0,0,0,1.86623752597084,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.692552326534174,0.91153644677601,0,0,0,3.82801391678303,0.915975934018623,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,2.4441205797345,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0.90392296312213,0,0,0,0,0,0.213452994739353,5.39485945871752,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0.577901179803038,0,0,0,0.429765441419957,0,0.558564802544508,0,0.717873024576814,0,0,0,0.470284307407084,2.52209918479682,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0.191915197319445,1.42939065274673,0,0,1.0859992035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| ||
|short_description=p11@COL5A1 | |short_description=p11@COL5A1 | ||
}} | }} |
Latest revision as of 08:59, 16 September 2015
Short description: | p11@COL5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_COL5A1_5end |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | 0bp_to_AB209864_5end |
EntrezGene: | COL5A1 |
HGNC: | 2209 |
UniProt: | Q59EE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.06e-15 | 19 |
fibroblast | 1.05e-11 | 76 |
mesenchymal stem cell of umbilical cord | 3.10e-09 | 6 |
multi fate stem cell | 3.77e-08 | 427 |
somatic stem cell | 1.00e-07 | 433 |
stem cell | 3.49e-07 | 441 |
connective tissue cell | 3.82e-07 | 361 |
mesenchymal stem cell of adipose | 6.26e-07 | 8 |
mesenchymal cell | 6.85e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 2.84e-11 | 24 |
mesenchyme of umbilical cord | 3.10e-09 | 6 |
extraembryonic membrane | 1.11e-07 | 14 |
membranous layer | 1.11e-07 | 14 |
connective tissue | 3.00e-07 | 371 |