FFCP PHASE1:Hg19::chr15:99539699..99539703,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:99539699..99539703,+ | |||
|coexpression_cluster_id=C169 | |||
|description=CAGE_peak_at_chr15:99539699..99539703,+ | |description=CAGE_peak_at_chr15:99539699..99539703,+ | ||
|id=chr15:99539699..99539703,+ | |id=chr15:99539699..99539703,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.34e-66;1!CL:0000786;3.34e-66;1!CL:0002569;2.59e-12;6!CL:0000945;3.86e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,2.39e-66,1;CL:0000786,2.39e-66,1;CL:0000980,2.39e-66,1;CL:0000785,5.04e-34,2;CL:0000955,5.04e-34,2;CL:0000818,5.04e-34,2;CL:0000954,5.04e-34,2;CL:0000816,5.04e-34,2;CL:0000817,3.27e-23,3;CL:0002569,2.74e-12,6;CL:0000945,3.75e-12,24;CL:0000826,3.75e-12,24 | |||
|ontology_enrichment_development_v019=CL:0000954;5.96e-34;2 | |||
|ontology_enrichment_disease=DOID:162!7.40e-08!235;DOID:14566!1.73e-07!239 | |ontology_enrichment_disease=DOID:162!7.40e-08!235;DOID:14566!1.73e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:2355;1.23e-66;1!DOID:74;3.61e-34;2!DOID:1287;7.35e-18;4!DOID:0060058;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.23e-66,1;DOID:74,3.61e-34,2;DOID:1287,7.35e-18,4;DOID:0060058,5.73e-08,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003422;2.59e-12;6!UBERON:0003104;9.43e-11;7!UBERON:0009142;9.43e-11;7!UBERON:0002331;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,2.74e-12,6;UBERON:0002331,6.56e-08,10;UBERON:0000358,6.56e-08,10;UBERON:0000307,6.56e-08,10;UBERON:0000091,6.56e-08,10;UBERON:0000087,6.56e-08,10;UBERON:0007010,6.56e-08,10;UBERON:0007806,6.56e-08,10;UBERON:0008780,6.56e-08,10;UBERON:0005728,6.56e-08,10 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0.410577285266046,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60451990113119,0,0,0,0.412618309791701,0,0,0.77380195455795,0,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0.617602894321944,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95897778844825,0,0,0,0.472775363535873,0.111231401892069,0,0,0,0,0,0,0,0,0.116241425368125,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | ||
|short_description=p@chr15:99539699..99539703,+ | |short_description=p@chr15:99539699..99539703,+ | ||
}} | }} |
Latest revision as of 05:59, 25 July 2015
Short description: | p@chr15:99539699..99539703, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:99539699..99539703, + |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 2.39e-66 | 1 |
plasma cell | 2.39e-66 | 1 |
plasmablast | 2.39e-66 | 1 |
mature B cell | 5.04e-34 | 2 |
pre-B-II cell | 5.04e-34 | 2 |
transitional stage B cell | 5.04e-34 | 2 |
small pre-B-II cell | 5.04e-34 | 2 |
immature B cell | 5.04e-34 | 2 |
precursor B cell | 3.27e-23 | 3 |
mesenchymal stem cell of umbilical cord | 2.74e-12 | 6 |
lymphocyte of B lineage | 3.75e-12 | 24 |
pro-B cell | 3.75e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 2.74e-12 | 6 |
umbilical cord | 6.56e-08 | 10 |
blastocyst | 6.56e-08 | 10 |
blastula | 6.56e-08 | 10 |
bilaminar disc | 6.56e-08 | 10 |
inner cell mass | 6.56e-08 | 10 |
cleaving embryo | 6.56e-08 | 10 |
connecting stalk | 6.56e-08 | 10 |
inner cell mass derived epiblast | 6.56e-08 | 10 |
extraembryonic mesoderm | 6.56e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.23e-66 | 1 |
hematopoietic system disease | 3.61e-34 | 2 |
cardiovascular system disease | 7.35e-18 | 4 |
lymphoma | 5.73e-08 | 10 |