FFCP PHASE1:Hg19::chr17:1013251..1013277,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:1013251..1013277,- | |||
|description=CAGE_peak_at_chr17:1013251..1013277,- | |description=CAGE_peak_at_chr17:1013251..1013277,- | ||
|id=chr17:1013251..1013277,- | |id=chr17:1013251..1013277,- | ||
|ontology_enrichment_celltype=CL:0000708!8.57e-09!3;CL:0000064!2.41e-08!3;CL:0005012!2.41e-08!3;CL:0000067!2.41e-08!3;CL:0002304!2.41e-08!3 | |ontology_enrichment_celltype=CL:0000708!8.57e-09!3;CL:0000064!2.41e-08!3;CL:0005012!2.41e-08!3;CL:0000067!2.41e-08!3;CL:0002304!2.41e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000708;6.09e-36;3!CL:0002549;5.35e-24;2!CL:0000342;6.82e-13;1!CL:0002565;6.82e-13;1!CL:0000306;1.10e-12;4!CL:0002222;1.10e-12;4!CL:0002224;1.10e-12;4!CL:0000327;1.14e-07;15!CL:0002575;2.28e-07;2!CL:0000499;5.35e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,7.74e-36,3;CL:0002549,5.35e-24,2;CL:0000306,8.17e-13,4;CL:0002222,8.17e-13,4;CL:0002224,8.17e-13,4;CL:0000342,9.73e-13,1;CL:0002565,9.73e-13,1;CL:0000327,1.19e-07,15;CL:0002575,2.28e-07,2;CL:0000499,5.43e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.95e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;6.82e-13;1!DOID:3347;6.82e-13;1!DOID:3350;4.42e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.23e-13,1;DOID:3347,5.38e-13,1;DOID:3350,3.48e-07,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003210;6.09e-36;3!UBERON:0006876;2.93e-26;11!UBERON:0005629;5.35e-24;2!UBERON:0005358;5.35e-24;2!UBERON:0001886;5.35e-24;2!UBERON:0004086;5.35e-24;2!UBERON:0005282;5.35e-24;2!UBERON:0005281;5.35e-24;2!UBERON:0005284;1.48e-21;5!UBERON:0007625;3.63e-17;11!UBERON:0001801;1.50e-13;14!UBERON:0002506;6.82e-13;1!UBERON:0001769;6.82e-13;1!UBERON:0010077;1.10e-12;4!UBERON:0005389;1.10e-12;4!UBERON:0000484;1.10e-12;4!UBERON:0000965;1.10e-12;4!UBERON:0001803;1.10e-12;4!UBERON:0000488;1.65e-12;4!UBERON:0000019;4.74e-10;19!UBERON:0000047;4.74e-10;19!UBERON:0004088;4.74e-10;19!UBERON:0010230;4.74e-10;19!UBERON:0000970;1.47e-09;20!UBERON:0002104;4.10e-09;21!UBERON:0001456;4.10e-09;21!UBERON:0002203;1.22e-08;6!UBERON:0001768;1.22e-08;6!UBERON:0002200;1.22e-08;6!UBERON:0000020;2.44e-08;23!UBERON:0001032;5.34e-08;24!UBERON:0004456;5.34e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,7.74e-36,3;UBERON:0006876,4.03e-26,11;UBERON:0005629,5.35e-24,2;UBERON:0005358,5.35e-24,2;UBERON:0001886,5.35e-24,2;UBERON:0004086,5.35e-24,2;UBERON:0005282,5.35e-24,2;UBERON:0005281,5.35e-24,2;UBERON:0005284,1.59e-21,5;UBERON:0007625,3.64e-17,11;UBERON:0001801,1.50e-13,14;UBERON:0010077,8.17e-13,4;UBERON:0005389,8.17e-13,4;UBERON:0000484,8.17e-13,4;UBERON:0002546,8.17e-13,4;UBERON:0000965,8.17e-13,4;UBERON:0001803,8.17e-13,4;UBERON:0003073,8.17e-13,4;UBERON:0005426,8.17e-13,4;UBERON:0002506,9.73e-13,1;UBERON:0001769,9.73e-13,1;UBERON:0000488,2.21e-12,4;UBERON:0000019,1.47e-09,20;UBERON:0000047,1.47e-09,20;UBERON:0010312,1.47e-09,20;UBERON:0004088,1.47e-09,20;UBERON:0010230,1.47e-09,20;UBERON:0003072,1.47e-09,20;UBERON:0004128,1.47e-09,20;UBERON:0003071,1.47e-09,20;UBERON:0000970,4.10e-09,21;UBERON:0002104,4.10e-09,21;UBERON:0001456,1.04e-08,22;UBERON:0002203,1.47e-08,6;UBERON:0001768,1.47e-08,6;UBERON:0002200,1.47e-08,6;UBERON:0000020,5.34e-08,24;UBERON:0001032,5.34e-08,24;UBERON:0004456,5.34e-08,24;UBERON:0000076,7.66e-07,8 | |||
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| ||
|short_description=p@chr17:1013251..1013277,- | |short_description=p@chr17:1013251..1013277,- | ||
}} | }} |
Latest revision as of 13:39, 25 July 2015
Short description: | p@chr17:1013251..1013277, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1013251..1013277, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 7.74e-36 | 3 |
fibroblast of choroid plexus | 5.35e-24 | 2 |
crystallin accumulating cell | 8.17e-13 | 4 |
vertebrate lens cell | 8.17e-13 | 4 |
lens epithelial cell | 8.17e-13 | 4 |
pigment cell (sensu Vertebrata) | 9.73e-13 | 1 |
iris pigment epithelial cell | 9.73e-13 | 1 |
extracellular matrix secreting cell | 1.19e-07 | 15 |
central nervous system pericyte | 2.28e-07 | 2 |
stromal cell | 5.43e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.23e-13 | 1 |
osteosarcoma | 5.38e-13 | 1 |
mesenchymal cell neoplasm | 3.48e-07 | 2 |