FFCP PHASE1:Hg19::chr17:26840716..26840746,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:26840716..26840746,+ | |||
|description=CAGE_peak_at_chr17:26840716..26840746,+ | |description=CAGE_peak_at_chr17:26840716..26840746,+ | ||
|id=chr17:26840716..26840746,+ | |id=chr17:26840716..26840746,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.20e-13!3;CL:0000861!1.20e-13!3 | |ontology_enrichment_celltype=CL:0002150!1.20e-13!3;CL:0000861!1.20e-13!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.49e-13;7!CL:0000586;1.49e-13;7!CL:0002178;8.96e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.49e-13,7;CL:0000586,1.49e-13,7;CL:0002178,8.96e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.84e-10;10!UBERON:0005564;8.84e-10;10 | |||
|ontology_enrichment_disease=DOID:305!4.77e-15!106;DOID:0050687!8.49e-11!143;DOID:162!1.11e-08!235;DOID:14566!2.32e-08!239;DOID:1749!4.62e-07!14 | |ontology_enrichment_disease=DOID:305!4.77e-15!106;DOID:0050687!8.49e-11!143;DOID:162!1.11e-08!235;DOID:14566!2.32e-08!239;DOID:1749!4.62e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;2.10e-23;1!DOID:3149;2.10e-23;1!DOID:3451;2.07e-12;2!DOID:4159;2.07e-12;2!DOID:0060122;2.07e-12;2!DOID:3119;2.52e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.10e-23,1;DOID:3149,2.10e-23,1;DOID:3451,2.07e-12,2;DOID:4159,2.07e-12,2;DOID:0060122,2.07e-12,2;DOID:3119,2.52e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001557!2.03e-28!19;UBERON:0001737!4.81e-28!9;UBERON:0000072!3.72e-12!46;UBERON:0000065!3.51e-10!53;UBERON:0001004!2.95e-09!72;UBERON:0001041!5.30e-08!98;UBERON:0008947!3.51e-07!38;UBERON:0003258!3.51e-07!38;UBERON:0000077!7.23e-07!130 | |ontology_enrichment_uberon=UBERON:0001557!2.03e-28!19;UBERON:0001737!4.81e-28!9;UBERON:0000072!3.72e-12!46;UBERON:0000065!3.51e-10!53;UBERON:0001004!2.95e-09!72;UBERON:0001041!5.30e-08!98;UBERON:0008947!3.51e-07!38;UBERON:0003258!3.51e-07!38;UBERON:0000077!7.23e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;5.13e-23;1!UBERON:0000014;7.18e-23;4!UBERON:0000473;5.52e-12;8!UBERON:0003135;5.64e-09;11!UBERON:0001052;7.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,4.10e-23,1;UBERON:0000014,6.42e-23,4;UBERON:0000473,5.52e-12,8;UBERON:0003135,5.64e-09,11;UBERON:0001052,7.27e-07,4 | |||
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| ||
|short_description=p@chr17:26840716..26840746,+ | |short_description=p@chr17:26840716..26840746,+ | ||
}} | }} |
Latest revision as of 14:59, 25 July 2015
Short description: | p@chr17:26840716..26840746, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:26840716..26840746, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.49e-13 | 7 |
germ cell | 1.49e-13 | 7 |
epithelial cell of stomach | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
surface | 4.10e-23 | 1 |
zone of skin | 6.42e-23 | 4 |
testis | 5.52e-12 | 8 |
male reproductive organ | 5.64e-09 | 11 |
rectum | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.10e-23 | 1 |
keratoacanthoma | 2.10e-23 | 1 |
skin carcinoma | 2.07e-12 | 2 |
skin cancer | 2.07e-12 | 2 |
integumentary system cancer | 2.07e-12 | 2 |
gastrointestinal system cancer | 2.52e-07 | 14 |