FFCP PHASE1:Hg19::chr17:55365619..55365632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:55365619..55365632,+ | |||
|coexpression_cluster_id=C397 | |||
|description=CAGE_peak_at_chr17:55365619..55365632,+ | |description=CAGE_peak_at_chr17:55365619..55365632,+ | ||
|id=chr17:55365619..55365632,+ | |id=chr17:55365619..55365632,+ | ||
|ontology_enrichment_celltype=CL:0002541!4.70e-09!3;CL:0002605!3.93e-08!3;CL:0000515!7.46e-07!4 | |ontology_enrichment_celltype=CL:0002541!4.70e-09!3;CL:0002605!3.93e-08!3;CL:0000515!7.46e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.64e-20;3!CL:0000515;4.64e-20;3!CL:0000056;2.65e-15;4!CL:0000680;3.80e-09;7!CL:0002262;2.15e-08;2!CL:1000398;2.15e-08;2!CL:0000349;2.40e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.43e-20,3;CL:0000515,1.79e-15,4;CL:0002262,1.73e-08,2;CL:1000398,1.73e-08,2;CL:0000349,2.37e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000515;2.65e-15;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!2.80e-11!8;UBERON:0003075!1.39e-10!86;UBERON:0007284!1.39e-10!86;UBERON:0001049!2.95e-10!57;UBERON:0005068!2.95e-10!57;UBERON:0006241!2.95e-10!57;UBERON:0007135!2.95e-10!57;UBERON:0002346!7.58e-10!90;UBERON:0003124!4.21e-09!7;UBERON:0000476!4.70e-09!3;UBERON:0000920!4.70e-09!3;UBERON:0002616!1.29e-08!59;UBERON:0000988!1.35e-08!3;UBERON:0001896!2.07e-08!3;UBERON:0005290!2.07e-08!3;UBERON:0010096!2.07e-08!3;UBERON:0005631!3.00e-08!14;UBERON:0000158!3.00e-08!14;UBERON:0000483!5.49e-08!309;UBERON:0000025!5.70e-08!194;UBERON:0000119!8.50e-08!312;UBERON:0000475!1.03e-07!365;UBERON:0003076!1.93e-07!15;UBERON:0003057!1.93e-07!15;UBERON:0004733!3.08e-07!12;UBERON:0002028!3.08e-07!12;UBERON:0007277!3.08e-07!12;UBERON:0002020!4.16e-07!34;UBERON:0003528!4.16e-07!34;UBERON:0007023!5.77e-07!115 | |ontology_enrichment_uberon=UBERON:0002298!2.80e-11!8;UBERON:0003075!1.39e-10!86;UBERON:0007284!1.39e-10!86;UBERON:0001049!2.95e-10!57;UBERON:0005068!2.95e-10!57;UBERON:0006241!2.95e-10!57;UBERON:0007135!2.95e-10!57;UBERON:0002346!7.58e-10!90;UBERON:0003124!4.21e-09!7;UBERON:0000476!4.70e-09!3;UBERON:0000920!4.70e-09!3;UBERON:0002616!1.29e-08!59;UBERON:0000988!1.35e-08!3;UBERON:0001896!2.07e-08!3;UBERON:0005290!2.07e-08!3;UBERON:0010096!2.07e-08!3;UBERON:0005631!3.00e-08!14;UBERON:0000158!3.00e-08!14;UBERON:0000483!5.49e-08!309;UBERON:0000025!5.70e-08!194;UBERON:0000119!8.50e-08!312;UBERON:0000475!1.03e-07!365;UBERON:0003076!1.93e-07!15;UBERON:0003057!1.93e-07!15;UBERON:0004733!3.08e-07!12;UBERON:0002028!3.08e-07!12;UBERON:0007277!3.08e-07!12;UBERON:0002020!4.16e-07!34;UBERON:0003528!4.16e-07!34;UBERON:0007023!5.77e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.64e-20;3!UBERON:0000920;4.64e-20;3!UBERON:0005631;1.86e-13;10!UBERON:0000158;1.86e-13;10!UBERON:0002298;2.19e-10;6!UBERON:0003513;4.95e-09;7!UBERON:0001905;2.15e-08;2!UBERON:0002148;2.15e-08;2!UBERON:0001281;2.15e-08;2!UBERON:0003497;2.15e-08;2!UBERON:0003909;2.15e-08;2!UBERON:0002757;2.15e-08;2!UBERON:0010134;2.15e-08;2!UBERON:0006331;2.15e-08;2!UBERON:0009662;2.15e-08;2!UBERON:0003835;2.15e-08;2!UBERON:0005408;2.15e-08;2!UBERON:0001899;2.15e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.43e-20,3;UBERON:0002298,2.90e-10,6;UBERON:0005631,8.70e-10,14;UBERON:0000158,8.70e-10,14;UBERON:0003124,3.73e-09,7;UBERON:0003513,4.76e-09,7;UBERON:0001281,1.73e-08,2;UBERON:0003497,1.73e-08,2;UBERON:0003909,1.73e-08,2;UBERON:0003835,1.73e-08,2;UBERON:0001905,2.87e-08,2;UBERON:0002757,2.87e-08,2;UBERON:0010134,2.87e-08,2;UBERON:0005408,2.87e-08,2;UBERON:0001899,2.87e-08,2;UBERON:0002148,3.08e-08,2;UBERON:0006331,3.08e-08,2;UBERON:0009662,3.08e-08,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88215698667853,0.410952645100767,3.22309733831812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0,0,0,0,0,0,0.178064071293475,0,0,0,0,1.39453664789186,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0.876901770507525,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0.641183153813036,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0,0.326587360109409,0,0,0,0,0,0,1.0342636508924,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,1.14681839138014,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0,0,0,0,0.310525913752519,0.414706207840855,0.53168342911599,0,0,0.761610424337591,0.406870733204662,0,0,0,1.59238355479446,18.0012494098419,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,1.07140367175657,0,0,0.91064876540519,0.0887023701626388,0,0,0.40781839786099,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88215698667853,0.410952645100767,3.22309733831812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0,0,0,0,0,0,0.178064071293475,0,0,0,0,1.39453664789186,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0.876901770507525,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0.641183153813036,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0,0.326587360109409,0,0,0,0,0,0,1.0342636508924,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,1.14681839138014,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0,0,0,0,0.310525913752519,0.414706207840855,0.53168342911599,0,0,0.761610424337591,0.406870733204662,0,0,0,1.59238355479446,18.0012494098419,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,1.07140367175657,0,0,0.91064876540519,0.0887023701626388,0,0,0.40781839786099,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:55365619..55365632,+ | |short_description=p@chr17:55365619..55365632,+ | ||
}} | }} |
Latest revision as of 19:10, 25 July 2015
Short description: | p@chr17:55365619..55365632, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:55365619..55365632, + |
Coexpression cluster: | C397_mesenchymal_Myoblast_rhabdomyosarcoma_Hepatic_Melanocyte_astrocytoma_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.43e-20 | 3 |
skeletal muscle myoblast | 1.79e-15 | 4 |
endothelial cell of sinusoid | 1.73e-08 | 2 |
endothelial cell of hepatic sinusoid | 1.73e-08 | 2 |
extraembryonic cell | 2.37e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.43e-20 | 3 |
brainstem | 2.90e-10 | 6 |
extraembryonic membrane | 8.70e-10 | 14 |
membranous layer | 8.70e-10 | 14 |
chorion | 3.73e-09 | 7 |
trunk blood vessel | 4.76e-09 | 7 |
hepatic sinusoid | 1.73e-08 | 2 |
abdomen blood vessel | 1.73e-08 | 2 |
sinusoid | 1.73e-08 | 2 |
abdominal segment blood vessel | 1.73e-08 | 2 |
pineal body | 2.87e-08 | 2 |
regional part of epithalamus | 2.87e-08 | 2 |
secretory circumventricular organ | 2.87e-08 | 2 |
circumventricular organ | 2.87e-08 | 2 |
epithalamus | 2.87e-08 | 2 |
locus ceruleus | 3.08e-08 | 2 |
brainstem nucleus | 3.08e-08 | 2 |
hindbrain nucleus | 3.08e-08 | 2 |