FFCP PHASE1:Hg19::chrX:99891689..99891764,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7105 | |EntrezGene=7105 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11858 | |HGNC=11858 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010nna.1_5end | |association_with_transcript=0bp_to_uc010nna.1_5end | ||
|cluster_id=chrX:99891689..99891764,- | |||
|description=CAGE_peak_1_at_TSPAN6_5end | |description=CAGE_peak_1_at_TSPAN6_5end | ||
|id=chrX:99891689..99891764,- | |id=chrX:99891689..99891764,- | ||
|ontology_enrichment_celltype=CL:0000066!1.15e-14!254;CL:0002321!2.86e-13!248;CL:0000220!1.60e-12!246;CL:0000055!7.45e-10!180;CL:0000325!1.83e-07!39;CL:0000393!3.25e-07!60;CL:0000211!3.25e-07!60 | |ontology_enrichment_celltype=CL:0000066!1.15e-14!254;CL:0002321!2.86e-13!248;CL:0000220!1.60e-12!246;CL:0000055!7.45e-10!180;CL:0000325!1.83e-07!39;CL:0000393!3.25e-07!60;CL:0000211!3.25e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.16e-14,253;CL:0002321,3.02e-13,250;CL:0000393,2.97e-07,61;CL:0000211,2.97e-07,61;CL:0000223,6.92e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.10e-14!143;DOID:305!4.27e-14!106;DOID:193!2.40e-08!29;DOID:120!1.56e-07!27 | |ontology_enrichment_disease=DOID:0050687!3.10e-14!143;DOID:305!4.27e-14!106;DOID:193!2.40e-08!29;DOID:120!1.56e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:193;2.36e-08;29!DOID:120;1.54e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.52e-14,143;DOID:305,3.46e-14,106;DOID:193,2.20e-08,29;DOID:120,1.45e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000481!5.67e-18!347;UBERON:0000468!2.07e-17!659;UBERON:0000922!1.24e-13!612;UBERON:0000475!1.68e-13!365;UBERON:0003104!2.56e-13!238;UBERON:0009142!2.56e-13!238;UBERON:0001048!1.51e-12!168;UBERON:0001007!1.94e-12!155;UBERON:0001555!1.94e-12!155;UBERON:0007026!1.94e-12!155;UBERON:0004119!2.72e-12!169;UBERON:0000925!2.72e-12!169;UBERON:0006595!2.72e-12!169;UBERON:0002050!4.77e-11!605;UBERON:0005423!4.77e-11!605;UBERON:0004921!5.33e-11!129;UBERON:0004185!5.33e-11!129;UBERON:0000467!8.97e-11!625;UBERON:0000923!9.46e-11!604;UBERON:0005291!9.46e-11!604;UBERON:0006598!9.46e-11!604;UBERON:0002532!9.46e-11!604;UBERON:0002100!9.68e-11!216;UBERON:0000480!1.70e-10!626;UBERON:0000490!1.04e-09!138;UBERON:0000466!4.71e-09!126;UBERON:0000077!4.75e-09!130;UBERON:0005156!4.82e-08!59;UBERON:0000990!4.82e-08!59;UBERON:0000119!7.36e-08!312;UBERON:0000483!8.99e-08!309;UBERON:0005256!1.71e-07!143;UBERON:0003133!1.76e-07!48;UBERON:0005911!1.78e-07!82;UBERON:0000063!1.86e-07!97;UBERON:0000477!2.61e-07!286;UBERON:0001041!3.52e-07!98;UBERON:0003929!8.82e-07!54;UBERON:0003134!9.73e-07!37;UBERON:0000474!9.73e-07!37 | |ontology_enrichment_uberon=UBERON:0000481!5.67e-18!347;UBERON:0000468!2.07e-17!659;UBERON:0000922!1.24e-13!612;UBERON:0000475!1.68e-13!365;UBERON:0003104!2.56e-13!238;UBERON:0009142!2.56e-13!238;UBERON:0001048!1.51e-12!168;UBERON:0001007!1.94e-12!155;UBERON:0001555!1.94e-12!155;UBERON:0007026!1.94e-12!155;UBERON:0004119!2.72e-12!169;UBERON:0000925!2.72e-12!169;UBERON:0006595!2.72e-12!169;UBERON:0002050!4.77e-11!605;UBERON:0005423!4.77e-11!605;UBERON:0004921!5.33e-11!129;UBERON:0004185!5.33e-11!129;UBERON:0000467!8.97e-11!625;UBERON:0000923!9.46e-11!604;UBERON:0005291!9.46e-11!604;UBERON:0006598!9.46e-11!604;UBERON:0002532!9.46e-11!604;UBERON:0002100!9.68e-11!216;UBERON:0000480!1.70e-10!626;UBERON:0000490!1.04e-09!138;UBERON:0000466!4.71e-09!126;UBERON:0000077!4.75e-09!130;UBERON:0005156!4.82e-08!59;UBERON:0000990!4.82e-08!59;UBERON:0000119!7.36e-08!312;UBERON:0000483!8.99e-08!309;UBERON:0005256!1.71e-07!143;UBERON:0003133!1.76e-07!48;UBERON:0005911!1.78e-07!82;UBERON:0000063!1.86e-07!97;UBERON:0000477!2.61e-07!286;UBERON:0001041!3.52e-07!98;UBERON:0003929!8.82e-07!54;UBERON:0003134!9.73e-07!37;UBERON:0000474!9.73e-07!37 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.11e-12,145;UBERON:0001555,1.11e-12,145;UBERON:0007026,1.11e-12,145;UBERON:0004119,1.65e-12,160;UBERON:0000925,1.65e-12,160;UBERON:0006595,1.65e-12,160;UBERON:0001048,9.59e-12,160;UBERON:0004921,4.69e-11,118;UBERON:0011216,1.69e-10,223;UBERON:0002100,4.08e-10,199;UBERON:0000922,4.82e-10,592;UBERON:0003104,8.18e-10,160;UBERON:0009142,8.18e-10,160;UBERON:0000490,2.21e-09,148;UBERON:0005156,4.44e-08,59;UBERON:0000990,4.44e-08,59;UBERON:0005423,4.51e-08,581;UBERON:0000119,4.84e-08,309;UBERON:0000483,5.92e-08,306;UBERON:0003133,1.63e-07,48;UBERON:0005911,1.84e-07,82;UBERON:0001041,3.45e-07,87;UBERON:0005256,7.75e-07,122;UBERON:0003134,9.11e-07,37;UBERON:0000474,9.11e-07,37;UBERON:0003929,9.95e-07,54 | |||
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|short_description=p1@TSPAN6 | |short_description=p1@TSPAN6 | ||
}} | }} |
Latest revision as of 15:56, 16 September 2015
Short description: | p1@TSPAN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSPAN6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010nna.1_5end |
EntrezGene: | TSPAN6 |
HGNC: | 11858 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.16e-14 | 253 |
embryonic cell | 3.02e-13 | 250 |
electrically responsive cell | 2.97e-07 | 61 |
electrically active cell | 2.97e-07 | 61 |
endodermal cell | 6.92e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
digestive system | 1.11e-12 | 145 |
digestive tract | 1.11e-12 | 145 |
primitive gut | 1.11e-12 | 145 |
endoderm-derived structure | 1.65e-12 | 160 |
endoderm | 1.65e-12 | 160 |
presumptive endoderm | 1.65e-12 | 160 |
primordium | 9.59e-12 | 160 |
subdivision of digestive tract | 4.69e-11 | 118 |
organ system subdivision | 1.69e-10 | 223 |
trunk | 4.08e-10 | 199 |
embryo | 4.82e-10 | 592 |
mesenchyme | 8.18e-10 | 160 |
entire embryonic mesenchyme | 8.18e-10 | 160 |
unilaminar epithelium | 2.21e-09 | 148 |
reproductive structure | 4.44e-08 | 59 |
reproductive system | 4.44e-08 | 59 |
developing anatomical structure | 4.51e-08 | 581 |
cell layer | 4.84e-08 | 309 |
epithelium | 5.92e-08 | 306 |
reproductive organ | 1.63e-07 | 48 |
endo-epithelium | 1.84e-07 | 82 |
foregut | 3.45e-07 | 87 |
trunk mesenchyme | 7.75e-07 | 122 |
female reproductive organ | 9.11e-07 | 37 |
female reproductive system | 9.11e-07 | 37 |
gut epithelium | 9.95e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.52e-14 | 143 |
carcinoma | 3.46e-14 | 106 |
reproductive organ cancer | 2.20e-08 | 29 |
female reproductive organ cancer | 1.45e-07 | 27 |