FFCP PHASE1:Hg19::chr19:36592925..36592948,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:36592925..36592948,+ | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_at_chr19:36592925..36592948,+ | |description=CAGE_peak_at_chr19:36592925..36592948,+ | ||
|id=chr19:36592925..36592948,+ | |id=chr19:36592925..36592948,+ | ||
|ontology_enrichment_celltype=CL:0000349!1.68e-11!3;CL:0002577!1.68e-11!3;CL:0002537!1.78e-11!5;CL:0002541!1.92e-10!3;CL:0002536!4.16e-08!2;CL:0000575!9.58e-08!2;CL:1000415!4.06e-07!2;CL:0000039!6.62e-07!7;CL:0000586!6.62e-07!7 | |ontology_enrichment_celltype=CL:0000349!1.68e-11!3;CL:0002577!1.68e-11!3;CL:0002537!1.78e-11!5;CL:0002541!1.92e-10!3;CL:0002536!4.16e-08!2;CL:0000575!9.58e-08!2;CL:1000415!4.06e-07!2;CL:0000039!6.62e-07!7;CL:0000586!6.62e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.47e-73;19!CL:0002537;9.52e-38;5!CL:0002577;8.97e-37;3!CL:0002536;1.02e-24;2!CL:0002541;1.37e-16;3!CL:0000575;3.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.69e-73,19;CL:0002537,1.15e-37,5;CL:0002577,8.98e-37,3;CL:0002536,1.02e-24,2;CL:0002541,1.37e-16,3;CL:0000575,3.70e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.64e-13;1!UBERON:0008814;4.98e-07;2!UBERON:0010056;4.98e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;4.98e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.59e-39!14;UBERON:0000158!4.59e-39!14;UBERON:0000478!1.17e-24!24;UBERON:0003124!2.99e-23!7;UBERON:0000305!1.15e-17!7;UBERON:0004871!2.35e-15!8;UBERON:0001987!1.48e-14!4;UBERON:0004340!1.48e-14!4;UBERON:0004923!3.12e-11!57;UBERON:0000476!1.92e-10!3;UBERON:0000920!1.92e-10!3;UBERON:0005795!1.73e-08!22;UBERON:0000064!5.13e-07!219;UBERON:0000995!6.45e-07!21 | |ontology_enrichment_uberon=UBERON:0005631!4.59e-39!14;UBERON:0000158!4.59e-39!14;UBERON:0000478!1.17e-24!24;UBERON:0003124!2.99e-23!7;UBERON:0000305!1.15e-17!7;UBERON:0004871!2.35e-15!8;UBERON:0001987!1.48e-14!4;UBERON:0004340!1.48e-14!4;UBERON:0004923!3.12e-11!57;UBERON:0000476!1.92e-10!3;UBERON:0000920!1.92e-10!3;UBERON:0005795!1.73e-08!22;UBERON:0000064!5.13e-07!219;UBERON:0000995!6.45e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.84e-74;10!UBERON:0000158;5.84e-74;10!UBERON:0000478;7.11e-69;24!UBERON:0000305;5.83e-60;7!UBERON:0001987;9.84e-48;4!UBERON:0003124;1.37e-16;3!UBERON:0000920;1.37e-16;3!UBERON:0004923;1.55e-08;55!UBERON:0000077;2.65e-07;27!UBERON:0000474;6.56e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.22e-119,14;UBERON:0000158,8.22e-119,14;UBERON:0000478,8.51e-69,24;UBERON:0003124,3.50e-60,7;UBERON:0000305,7.15e-60,7;UBERON:0004871,2.22e-52,8;UBERON:0001987,1.11e-47,4;UBERON:0004340,1.11e-47,4;UBERON:0004923,4.03e-24,66;UBERON:0000920,1.37e-16,3;UBERON:0000995,5.13e-14,21;UBERON:0005795,2.23e-13,22;UBERON:0003975,2.23e-13,22;UBERON:0004175,9.14e-12,25;UBERON:0003134,6.44e-08,37;UBERON:0000474,6.44e-08,37;UBERON:0003100,3.93e-07,41;UBERON:0000077,8.40e-07,29 | |||
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| ||
|short_description=p@chr19:36592925..36592948,+ | |short_description=p@chr19:36592925..36592948,+ | ||
}} | }} |
Latest revision as of 07:00, 26 July 2015
Short description: | p@chr19:36592925..36592948, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36592925..36592948, + |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.69e-73 | 19 |
amnion mesenchymal stem cell | 1.15e-37 | 5 |
placental epithelial cell | 8.98e-37 | 3 |
amniotic epithelial cell | 1.02e-24 | 2 |
chorionic membrane mesenchymal stem cell | 1.37e-16 | 3 |
corneal epithelial cell | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.22e-119 | 14 |
membranous layer | 8.22e-119 | 14 |
extraembryonic structure | 8.51e-69 | 24 |
chorion | 3.50e-60 | 7 |
amnion | 7.15e-60 | 7 |
somatic layer of lateral plate mesoderm | 2.22e-52 | 8 |
placenta | 1.11e-47 | 4 |
allantois | 1.11e-47 | 4 |
organ component layer | 4.03e-24 | 66 |
egg chorion | 1.37e-16 | 3 |
uterus | 5.13e-14 | 21 |
embryonic uterus | 2.23e-13 | 22 |
internal female genitalia | 2.23e-13 | 22 |
internal genitalia | 9.14e-12 | 25 |
female reproductive organ | 6.44e-08 | 37 |
female reproductive system | 6.44e-08 | 37 |
female organism | 3.93e-07 | 41 |
mixed endoderm/mesoderm-derived structure | 8.40e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.69e-07 | 2 |