FFCP PHASE1:Hg19::chr1:236046612..236046625,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt=F5H074 | |UniProt=F5H074 | ||
|association_with_transcript=246bp_to_ENST00000536965_5end | |association_with_transcript=246bp_to_ENST00000536965_5end | ||
|cluster_id=chr1:236046612..236046625,- | |||
|description=CAGE_peak_14_at_LYST_5end | |description=CAGE_peak_14_at_LYST_5end | ||
|id=chr1:236046612..236046625,- | |id=chr1:236046612..236046625,- | ||
|ontology_enrichment_celltype=CL:0000453!4.41e-10!5;CL:0000148!5.32e-10!10;CL:0000541!5.32e-10!10;CL:0000710!9.46e-08!20;CL:0000147!6.64e-07!14 | |ontology_enrichment_celltype=CL:0000453!4.41e-10!5;CL:0000148!5.32e-10!10;CL:0000541!5.32e-10!10;CL:0000710!9.46e-08!20;CL:0000147!6.64e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.26e-35;5!CL:0000148;2.26e-27;10!CL:0000990;5.78e-20;8!CL:0000147;1.45e-19;14!CL:0000451;2.16e-16;10!CL:0002567;8.43e-16;3!CL:0000710;1.08e-13;20!CL:0000228;2.75e-12;1!CL:0002566;2.75e-12;1!CL:0002372;2.75e-12;1!CL:0000075;4.01e-10;27!CL:0002077;3.36e-08;34!CL:0001014;5.73e-07;2!CL:0001016;5.73e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.63e-36,5;CL:0000148,3.51e-27,10;CL:0000541,3.51e-27,10;CL:0000990,3.72e-20,8;CL:0000147,1.98e-19,14;CL:0000451,1.51e-16,10;CL:0002567,1.22e-15,3;CL:0000710,1.35e-13,20;CL:0000228,2.46e-12,1;CL:0002372,2.46e-12,1;CL:0002566,3.45e-12,1;CL:0000075,4.69e-10,27;CL:0000333,8.84e-09,41;CL:0002077,5.80e-08,34;CL:0001014,5.41e-07,2;CL:0001016,5.41e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!4.22e-07!2 | |ontology_enrichment_disease=DOID:1909!4.22e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;3.49e-23;2!DOID:6193;8.84e-13;1!DOID:3350;5.11e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.49e-23,2;DOID:6193,8.85e-13,1;DOID:3350,5.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.02e-15!86;UBERON:0001017!2.53e-15!82;UBERON:0000073!1.36e-13!94;UBERON:0001016!1.36e-13!94;UBERON:0000955!3.20e-13!69;UBERON:0006238!3.20e-13!69;UBERON:0001049!2.78e-11!57;UBERON:0005068!2.78e-11!57;UBERON:0006241!2.78e-11!57;UBERON:0007135!2.78e-11!57;UBERON:0004121!3.16e-11!169;UBERON:0000924!9.10e-11!173;UBERON:0006601!9.10e-11!173;UBERON:0007023!3.98e-10!115;UBERON:0003075!8.21e-10!86;UBERON:0007284!8.21e-10!86;UBERON:0002616!1.97e-09!59;UBERON:0002346!3.86e-09!90;UBERON:0000033!5.31e-09!123;UBERON:0000153!2.73e-08!129;UBERON:0007811!2.73e-08!129;UBERON:0001950!9.15e-08!20;UBERON:0002780!2.65e-07!41;UBERON:0001890!2.65e-07!41;UBERON:0006240!2.65e-07!41;UBERON:0001905!2.72e-07!2;UBERON:0002757!2.72e-07!2;UBERON:0010134!2.72e-07!2;UBERON:0002784!2.72e-07!2;UBERON:0005408!2.72e-07!2;UBERON:0001899!2.72e-07!2;UBERON:0003080!4.52e-07!42;UBERON:0002619!5.88e-07!22;UBERON:0000200!9.39e-07!6 | |ontology_enrichment_uberon=UBERON:0005743!1.02e-15!86;UBERON:0001017!2.53e-15!82;UBERON:0000073!1.36e-13!94;UBERON:0001016!1.36e-13!94;UBERON:0000955!3.20e-13!69;UBERON:0006238!3.20e-13!69;UBERON:0001049!2.78e-11!57;UBERON:0005068!2.78e-11!57;UBERON:0006241!2.78e-11!57;UBERON:0007135!2.78e-11!57;UBERON:0004121!3.16e-11!169;UBERON:0000924!9.10e-11!173;UBERON:0006601!9.10e-11!173;UBERON:0007023!3.98e-10!115;UBERON:0003075!8.21e-10!86;UBERON:0007284!8.21e-10!86;UBERON:0002616!1.97e-09!59;UBERON:0002346!3.86e-09!90;UBERON:0000033!5.31e-09!123;UBERON:0000153!2.73e-08!129;UBERON:0007811!2.73e-08!129;UBERON:0001950!9.15e-08!20;UBERON:0002780!2.65e-07!41;UBERON:0001890!2.65e-07!41;UBERON:0006240!2.65e-07!41;UBERON:0001905!2.72e-07!2;UBERON:0002757!2.72e-07!2;UBERON:0010134!2.72e-07!2;UBERON:0002784!2.72e-07!2;UBERON:0005408!2.72e-07!2;UBERON:0001899!2.72e-07!2;UBERON:0003080!4.52e-07!42;UBERON:0002619!5.88e-07!22;UBERON:0000200!9.39e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.37e-24;2!UBERON:0002757;6.37e-24;2!UBERON:0010134;6.37e-24;2!UBERON:0005408;6.37e-24;2!UBERON:0001899;6.37e-24;2!UBERON:0003296;1.86e-12;4!UBERON:0010133;1.86e-12;4!UBERON:0002784;1.86e-12;4!UBERON:0001894;1.72e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.38e-24,2;UBERON:0002757,6.38e-24,2;UBERON:0010134,6.38e-24,2;UBERON:0005408,6.38e-24,2;UBERON:0001899,6.38e-24,2;UBERON:0003296,1.86e-12,4;UBERON:0010133,1.86e-12,4;UBERON:0002784,1.86e-12,4;UBERON:0001894,1.72e-07,7;UBERON:0006222,1.72e-07,7 | |||
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| ||
|short_description=p14@LYST | |short_description=p14@LYST | ||
}} | }} |
Latest revision as of 13:20, 16 September 2015
Short description: | p14@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LYST_5end |
Coexpression cluster: | NA |
Association with transcript: | 246bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.63e-36 | 5 |
melanocyte | 3.51e-27 | 10 |
melanoblast | 3.51e-27 | 10 |
conventional dendritic cell | 3.72e-20 | 8 |
pigment cell | 1.98e-19 | 14 |
dendritic cell | 1.51e-16 | 10 |
light melanocyte | 1.22e-15 | 3 |
neurecto-epithelial cell | 1.35e-13 | 20 |
multinucleate cell | 2.46e-12 | 1 |
myotube | 2.46e-12 | 1 |
dark melanocyte | 3.45e-12 | 1 |
columnar/cuboidal epithelial cell | 4.69e-10 | 27 |
migratory neural crest cell | 8.84e-09 | 41 |
ecto-epithelial cell | 5.80e-08 | 34 |
CD1a-positive Langerhans cell | 5.41e-07 | 2 |
immature CD1a-positive Langerhans cell | 5.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.38e-24 | 2 |
regional part of epithalamus | 6.38e-24 | 2 |
secretory circumventricular organ | 6.38e-24 | 2 |
circumventricular organ | 6.38e-24 | 2 |
epithalamus | 6.38e-24 | 2 |
gland of diencephalon | 1.86e-12 | 4 |
neuroendocrine gland | 1.86e-12 | 4 |
regional part of diencephalon | 1.86e-12 | 4 |
diencephalon | 1.72e-07 | 7 |
future diencephalon | 1.72e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.49e-23 | 2 |
epithelioid sarcoma | 8.85e-13 | 1 |
mesenchymal cell neoplasm | 5.11e-07 | 2 |