FFCP PHASE1:Hg19::chr2:42182246..42182262,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:42182246..42182262,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr2:42182246..42182262,- | |description=CAGE_peak_at_chr2:42182246..42182262,- | ||
|id=chr2:42182246..42182262,- | |id=chr2:42182246..42182262,- | ||
|ontology_enrichment_celltype=CL:0002150!1.56e-18!3;CL:0000861!1.56e-18!3;CL:0000167!1.55e-07!1;CL:0000164!1.55e-07!1;CL:0000502!1.55e-07!1;CL:0000172!1.55e-07!1;CL:0000173!1.55e-07!1;CL:0002351!1.55e-07!1 | |ontology_enrichment_celltype=CL:0002150!1.56e-18!3;CL:0000861!1.56e-18!3;CL:0000167!1.55e-07!1;CL:0000164!1.55e-07!1;CL:0000502!1.55e-07!1;CL:0000172!1.55e-07!1;CL:0000173!1.55e-07!1;CL:0002351!1.55e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000167;9.99e-30;1!CL:0000164;9.99e-30;1!CL:0000502;9.99e-30;1!CL:0000172;9.99e-30;1!CL:0000173;9.99e-30;1!CL:1000415;1.91e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.99e-30,1;CL:0000164,9.99e-30,1;CL:0000502,9.99e-30,1;CL:0000172,9.99e-30,1;CL:0000173,9.99e-30,1;CL:0002351,9.99e-30,1;CL:1000415,1.78e-15,2 | |||
|ontology_enrichment_development_v019=CL:0002351;9.99e-30;1!UBERON:0003056;1.14e-10;3 | |||
|ontology_enrichment_disease=DOID:4430!1.55e-07!1 | |ontology_enrichment_disease=DOID:4430!1.55e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;9.99e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.99e-30,1;DOID:0050687,2.39e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001896!1.75e-08!3;UBERON:0005290!1.75e-08!3;UBERON:0010096!1.75e-08!3;UBERON:0001831!2.52e-07!1;UBERON:0001567!2.52e-07!1;UBERON:0008801!2.52e-07!1;UBERON:0002038!2.67e-07!1;UBERON:0009661!2.67e-07!1;UBERON:0002135!3.60e-07!1;UBERON:0002336!3.82e-07!1;UBERON:0001018!3.82e-07!1;UBERON:0002473!3.82e-07!1;UBERON:0005340!3.82e-07!1;UBERON:0002316!3.82e-07!1;UBERON:0003544!3.82e-07!1;UBERON:0001020!3.82e-07!1;UBERON:0005970!3.82e-07!1;UBERON:0002437!3.82e-07!1;UBERON:0002298!5.28e-07!8;UBERON:0003112!5.45e-07!1;UBERON:0000032!5.45e-07!1;UBERON:0005253!5.45e-07!1;UBERON:0003128!5.45e-07!1;UBERON:0002241!5.45e-07!1;UBERON:0001703!5.45e-07!1;UBERON:0004761!5.45e-07!1;UBERON:0009617!5.45e-07!1 | |ontology_enrichment_uberon=UBERON:0001896!1.75e-08!3;UBERON:0005290!1.75e-08!3;UBERON:0010096!1.75e-08!3;UBERON:0001831!2.52e-07!1;UBERON:0001567!2.52e-07!1;UBERON:0008801!2.52e-07!1;UBERON:0002038!2.67e-07!1;UBERON:0009661!2.67e-07!1;UBERON:0002135!3.60e-07!1;UBERON:0002336!3.82e-07!1;UBERON:0001018!3.82e-07!1;UBERON:0002473!3.82e-07!1;UBERON:0005340!3.82e-07!1;UBERON:0002316!3.82e-07!1;UBERON:0003544!3.82e-07!1;UBERON:0001020!3.82e-07!1;UBERON:0005970!3.82e-07!1;UBERON:0002437!3.82e-07!1;UBERON:0002298!5.28e-07!8;UBERON:0003112!5.45e-07!1;UBERON:0000032!5.45e-07!1;UBERON:0005253!5.45e-07!1;UBERON:0003128!5.45e-07!1;UBERON:0002241!5.45e-07!1;UBERON:0001703!5.45e-07!1;UBERON:0004761!5.45e-07!1;UBERON:0009617!5.45e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;9.43e-11;3!UBERON:0000966;6.58e-07;5!UBERON:0005388;6.58e-07;5!UBERON:0001802;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,8.99e-11,3;UBERON:0006242,8.99e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.4931208058861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25497827182285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.65780385377567,0.574808199372465,0,0,0,0,0,0,4.88878456837007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92986669276972,0,7.09072694745564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39265542612958,0,0,0,0,0,0,0,0,15.7903286558089,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.4931208058861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25497827182285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.65780385377567,0.574808199372465,0,0,0,0,0,0,4.88878456837007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92986669276972,0,7.09072694745564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39265542612958,0,0,0,0,0,0,0,0,15.7903286558089,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:42182246..42182262,- | |short_description=p@chr2:42182246..42182262,- | ||
}} | }} |
Latest revision as of 10:09, 29 July 2015
Short description: | p@chr2:42182246..42182262, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:42182246..42182262, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.99e-30 | 1 |
enteroendocrine cell | 9.99e-30 | 1 |
type D enteroendocrine cell | 9.99e-30 | 1 |
somatostatin secreting cell | 9.99e-30 | 1 |
pancreatic D cell | 9.99e-30 | 1 |
progenitor cell of endocrine pancreas | 9.99e-30 | 1 |
epithelial cell of gall bladder | 1.78e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 8.99e-11 | 3 |
gall bladder primordium | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.99e-30 | 1 |
cell type cancer | 2.39e-07 | 143 |