FFCP PHASE1:Hg19::chr3:25634199..25634205,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:25634199..25634205,- | |||
|coexpression_cluster_id=C122 | |||
|description=CAGE_peak_at_chr3:25634199..25634205,- | |description=CAGE_peak_at_chr3:25634199..25634205,- | ||
|id=chr3:25634199..25634205,- | |id=chr3:25634199..25634205,- | ||
|ontology_enrichment_celltype=CL:0002582!6.91e-07!3 | |ontology_enrichment_celltype=CL:0002582!6.91e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002593;2.90e-12;2!CL:0000307;9.66e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,2.90e-12,2;CL:0000068,9.66e-09,3;CL:0000069,9.66e-09,3;CL:0000307,9.66e-09,3;CL:0000377,9.66e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000377;9.66e-09;3 | |||
|ontology_enrichment_disease=DOID:162!4.70e-12!235;DOID:14566!1.76e-11!239;DOID:305!1.14e-07!106;DOID:0050687!5.03e-07!143 | |ontology_enrichment_disease=DOID:162!4.70e-12!235;DOID:14566!1.76e-11!239;DOID:305!1.14e-07!106;DOID:0050687!5.03e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.85e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.65e-12,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;4.10e-23;1!UBERON:0002456;2.90e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.28e-23,1;UBERON:0002456,2.90e-12,2 | |||
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| ||
|short_description=p@chr3:25634199..25634205,- | |short_description=p@chr3:25634199..25634205,- | ||
}} | }} |
Latest revision as of 20:14, 29 July 2015
Short description: | p@chr3:25634199..25634205, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:25634199..25634205, - |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 2.90e-12 | 2 |
duct epithelial cell | 9.66e-09 | 3 |
branched duct epithelial cell | 9.66e-09 | 3 |
tracheal epithelial cell | 9.66e-09 | 3 |
tracheoblast | 9.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.28e-23 | 1 |
internal thoracic artery | 2.90e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.65e-12 | 2 |