FFCP PHASE1:Hg19::chr10:91043477..91043497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000354541_5end | |association_with_transcript=-24bp_to_ENST00000354541_5end | ||
|cluster_id=chr10:91043477..91043497,+ | |||
|coexpression_cluster_id=C3056 | |||
|description=CAGE_peak_1_at_ENST00000354541_5end | |description=CAGE_peak_1_at_ENST00000354541_5end | ||
|id=chr10:91043477..91043497,+ | |id=chr10:91043477..91043497,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.18e-16;10!CL:1000494;2.18e-16;10!CL:0000064;1.35e-15;3!CL:0000067;1.35e-15;3!CL:0005012;1.35e-15;3!CL:0002304;1.35e-15;3!CL:1000497;1.37e-12;17!CL:0002518;1.37e-12;17!CL:0000306;2.29e-11;4!CL:0002222;2.29e-11;4!CL:0002224;2.29e-11;4!CL:1000449;9.95e-11;15!CL:0000075;2.93e-10;27!CL:0002681;1.18e-09;12!CL:0002584;1.18e-09;12!CL:0002149;1.01e-07;6!CL:0002255;1.01e-07;6!CL:0000239;2.39e-07;3!CL:1000615;2.39e-07;3!CL:0002306;2.39e-07;3!CL:0002586;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.31e-16,10;CL:1000494,3.31e-16,10;CL:0000064,1.29e-15,3;CL:0000067,1.29e-15,3;CL:0005012,1.29e-15,3;CL:0002304,1.29e-15,3;CL:0000066,2.03e-13,253;CL:1000497,1.48e-12,17;CL:0002518,1.48e-12,17;CL:0000306,2.95e-11,4;CL:0002222,2.95e-11,4;CL:0002224,2.95e-11,4;CL:1000449,1.30e-10,15;CL:0000075,3.31e-10,27;CL:0002681,1.62e-09,12;CL:0002584,1.62e-09,12;CL:0002149,8.83e-08,6;CL:0002255,8.83e-08,6;CL:0002586,2.25e-07,3;CL:0000239,2.63e-07,3;CL:1000615,2.63e-07,3;CL:0002306,2.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.21e-07;3 | |||
|ontology_enrichment_disease=DOID:305!5.19e-07!106 | |ontology_enrichment_disease=DOID:305!5.19e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.89e-10;2!DOID:3001;1.01e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.06e-10,2;DOID:3001,8.83e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0007625!6.21e-12!11;UBERON:0002113!1.31e-09!27;UBERON:0003918!1.31e-09!27;UBERON:0005095!1.31e-09!27;UBERON:0007687!1.31e-09!27;UBERON:0000489!9.86e-09!32;UBERON:0000970!2.72e-08!20;UBERON:0006554!3.28e-08!44;UBERON:0001008!7.53e-08!45;UBERON:0000475!8.26e-08!365;UBERON:0000020!8.45e-08!23;UBERON:0002104!1.15e-07!21;UBERON:0000019!1.38e-07!19;UBERON:0000047!1.38e-07!19;UBERON:0004088!1.38e-07!19;UBERON:0003072!1.38e-07!19;UBERON:0003071!1.38e-07!19;UBERON:0004128!1.38e-07!19;UBERON:0000062!1.38e-07!511;UBERON:0003075!1.85e-07!86;UBERON:0007284!1.85e-07!86;UBERON:0004175!2.51e-07!25;UBERON:0000058!2.82e-07!26;UBERON:0001032!2.92e-07!24;UBERON:0004456!2.92e-07!24;UBERON:0002346!3.50e-07!90;UBERON:0000064!4.42e-07!219;UBERON:0000119!8.50e-07!312 | |ontology_enrichment_uberon=UBERON:0007625!6.21e-12!11;UBERON:0002113!1.31e-09!27;UBERON:0003918!1.31e-09!27;UBERON:0005095!1.31e-09!27;UBERON:0007687!1.31e-09!27;UBERON:0000489!9.86e-09!32;UBERON:0000970!2.72e-08!20;UBERON:0006554!3.28e-08!44;UBERON:0001008!7.53e-08!45;UBERON:0000475!8.26e-08!365;UBERON:0000020!8.45e-08!23;UBERON:0002104!1.15e-07!21;UBERON:0000019!1.38e-07!19;UBERON:0000047!1.38e-07!19;UBERON:0004088!1.38e-07!19;UBERON:0003072!1.38e-07!19;UBERON:0003071!1.38e-07!19;UBERON:0004128!1.38e-07!19;UBERON:0000062!1.38e-07!511;UBERON:0003075!1.85e-07!86;UBERON:0007284!1.85e-07!86;UBERON:0004175!2.51e-07!25;UBERON:0000058!2.82e-07!26;UBERON:0001032!2.92e-07!24;UBERON:0004456!2.92e-07!24;UBERON:0002346!3.50e-07!90;UBERON:0000064!4.42e-07!219;UBERON:0000119!8.50e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.10e-34;11!UBERON:0000488;2.38e-20;4!UBERON:0000019;3.09e-19;19!UBERON:0000047;3.09e-19;19!UBERON:0004088;3.09e-19;19!UBERON:0010230;3.09e-19;19!UBERON:0000970;3.41e-18;20!UBERON:0002104;3.00e-17;21!UBERON:0001456;3.00e-17;21!UBERON:0004211;2.18e-16;10!UBERON:0009773;2.18e-16;10!UBERON:0001231;2.18e-16;10!UBERON:0004810;2.18e-16;10!UBERON:0001801;2.62e-16;14!UBERON:0000020;1.32e-15;23!UBERON:0001778;1.35e-15;3!UBERON:0001775;1.35e-15;3!UBERON:0001032;6.88e-15;24!UBERON:0004456;6.88e-15;24!UBERON:0002203;1.33e-13;6!UBERON:0001768;1.33e-13;6!UBERON:0002200;1.33e-13;6!UBERON:0010077;2.29e-11;4!UBERON:0005389;2.29e-11;4!UBERON:0000484;2.29e-11;4!UBERON:0000965;2.29e-11;4!UBERON:0001803;2.29e-11;4!UBERON:0002113;3.41e-11;24!UBERON:0011143;3.41e-11;24!UBERON:0006554;5.50e-11;30!UBERON:0001008;5.50e-11;30!UBERON:0006555;9.95e-11;15!UBERON:0004819;9.95e-11;15!UBERON:0001285;9.95e-11;15!UBERON:0007684;9.95e-11;15!UBERON:0010371;1.33e-10;31!UBERON:0001225;1.18e-09;12!UBERON:0008987;1.18e-09;12!UBERON:0000489;4.73e-09;29!UBERON:0001851;1.15e-07;15!UBERON:0000353;1.15e-07;15!UBERON:0006876;1.96e-07;11!UBERON:0006853;2.39e-07;3!UBERON:0007685;2.39e-07;3!UBERON:0004134;2.39e-07;3!UBERON:0001781;2.55e-07;3!UBERON:0001782;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.30e-34,11;UBERON:0000488,2.28e-20,4;UBERON:0000019,3.58e-18,20;UBERON:0000047,3.58e-18,20;UBERON:0010312,3.58e-18,20;UBERON:0004088,3.58e-18,20;UBERON:0010230,3.58e-18,20;UBERON:0003072,3.58e-18,20;UBERON:0004128,3.58e-18,20;UBERON:0003071,3.58e-18,20;UBERON:0000970,3.14e-17,21;UBERON:0002104,3.14e-17,21;UBERON:0001456,2.26e-16,22;UBERON:0001801,3.03e-16,14;UBERON:0004810,3.31e-16,10;UBERON:0001778,1.29e-15,3;UBERON:0001775,1.29e-15,3;UBERON:0000020,7.15e-15,24;UBERON:0001032,7.15e-15,24;UBERON:0004456,7.15e-15,24;UBERON:0002203,1.29e-13,6;UBERON:0001768,1.29e-13,6;UBERON:0002200,1.29e-13,6;UBERON:0002113,6.72e-13,26;UBERON:0003918,6.72e-13,26;UBERON:0011143,6.72e-13,26;UBERON:0005095,6.72e-13,26;UBERON:0007687,6.72e-13,26;UBERON:0010077,2.95e-11,4;UBERON:0005389,2.95e-11,4;UBERON:0000484,2.95e-11,4;UBERON:0002546,2.95e-11,4;UBERON:0000965,2.95e-11,4;UBERON:0001803,2.95e-11,4;UBERON:0003073,2.95e-11,4;UBERON:0005426,2.95e-11,4;UBERON:0005085,3.79e-11,31;UBERON:0004211,1.30e-10,15;UBERON:0009773,1.30e-10,15;UBERON:0001231,1.30e-10,15;UBERON:0001285,1.30e-10,15;UBERON:0007684,1.30e-10,15;UBERON:0004208,1.30e-10,15;UBERON:0000489,1.43e-10,31;UBERON:0006555,6.53e-10,16;UBERON:0004819,6.53e-10,16;UBERON:0006554,9.03e-10,47;UBERON:0001008,1.60e-09,48;UBERON:0001225,1.62e-09,12;UBERON:0008987,1.62e-09,12;UBERON:0001851,1.47e-07,15;UBERON:0000353,1.47e-07,15;UBERON:0006876,1.93e-07,11;UBERON:0001782,2.25e-07,3;UBERON:0005424,2.25e-07,3;UBERON:0006853,2.63e-07,3;UBERON:0007685,2.63e-07,3;UBERON:0004134,2.63e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0.144846518960824,0,0,3.78139268656271,3.99112915432615,2.45937399940753,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.529636723252875,0.860509862246441,0,0,0,0.74000264525148,0,0,0.817309515567294,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.340296549480063,0.179389635688862,0,0,0.900273288253207,0.206105058476878,0.257640540045629,0.18611685633159,0.843881661206331,0.194874010322397,0.504867548488229,0.184099797284599,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,6.00487336044839,0.109750285408626,0,0,0,0,0,2.88662684050547,1.04337364477569,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.22001485746285,0,0,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.535286966391485,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0.992431231275107,0,0,0.640695746278505,1.02341449813341,0.321707842287215,0,0,0.177561725313127,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,2.25599806453706,1.38627606787947,0,1.46139224653261,0.527758144464379,0,0,0.647747748306418,0,0.541892875087706,1.00337954770971,1.27438136522519,4.15538004464362,0.447749509444357,0,0,3.07740150139667,1.64007322849853,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.495854746082934,0,0.127612712494584,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.43246690842614,0.296964680832639,0,0,0.281338832821026,1.00177834520615,0,13.5120261201916,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0,0.120596438625408,1.52581736317083,1.65868889896837,0.591095237907095,0,0.32681539055697,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,2.53197677433632,1.79556088975062,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82672910881823,0.789168805698781,1.20990716048664,0,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,1.70765727617876,0,0.347119476670262,0.0979923974143777,10.2729863764875,0.52418000472609,0.51595809741485,0.0967563312890851,0.146178634172371,0,0.193978032976839,0,0.677942222341597,0,0,0.189932387867636,0,0.400794101257669,0.213452994739353,0,0,0,0,0.14405479798815,0.124252535565433,0,0.543616824294456,0.523014231561666,0.101998217636322,0.866851769704557,0,0.136905378891993,0,0.859530882839914,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0.182248669974074,0,1.18208560948797,0.314727528809989,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,2.39460383124975,0,0.170388021785422,0.113312091520126,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.443716206147409,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.453692771289717,0,0,0.318593534327405,0,0.310525913752519,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0.537052785212442,0.464033759878494,0,0,0.686791410365586,0.336749488765919,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,1.97355644620836,5.30067437837643,0.964570191354574,1.35153952522458,0,1.38172136692479,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0.139879507719444,0,0,0.539124056983409,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.550285795565037,0.924205329202706,0,0,0,0.150420656698515,0.40341013740704,0,0,0.655087670040387,0.295712172434091,0.135075169236789,0,0,0,0,0,0,0.351742488719241,0,0,0.336283722218824,0,0,0.0887023701626388,0,0.171488009437418,0.135939465953663,0.131545547125698,0,1.5572396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| ||
|short_description=p1@ENST00000354541 | |short_description=p1@ENST00000354541 | ||
}} | }} |
Latest revision as of 16:35, 23 July 2015
Short description: | p1@ENST00000354541 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000354541_5end |
Coexpression cluster: | C3056_epidermoid_Renal_anaplastic_clear_Iris_ductal_Retinal |
Association with transcript: | -24bp_to_ENST00000354541_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.31e-16 | 10 |
nephron tubule epithelial cell | 3.31e-16 | 10 |
ciliated cell | 1.29e-15 | 3 |
ciliated epithelial cell | 1.29e-15 | 3 |
multi-ciliated epithelial cell | 1.29e-15 | 3 |
non-pigmented ciliary epithelial cell | 1.29e-15 | 3 |
epithelial cell | 2.03e-13 | 253 |
kidney cell | 1.48e-12 | 17 |
kidney epithelial cell | 1.48e-12 | 17 |
crystallin accumulating cell | 2.95e-11 | 4 |
vertebrate lens cell | 2.95e-11 | 4 |
lens epithelial cell | 2.95e-11 | 4 |
epithelial cell of nephron | 1.30e-10 | 15 |
columnar/cuboidal epithelial cell | 3.31e-10 | 27 |
kidney cortical cell | 1.62e-09 | 12 |
renal cortical epithelial cell | 1.62e-09 | 12 |
epithelial cell of uterus | 8.83e-08 | 6 |
stromal cell of endometrium | 8.83e-08 | 6 |
retinal pigment epithelial cell | 2.25e-07 | 3 |
brush border epithelial cell | 2.63e-07 | 3 |
kidney cortex tubule cell | 2.63e-07 | 3 |
epithelial cell of proximal tubule | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.06e-10 | 2 |
female reproductive endometrioid cancer | 8.83e-08 | 6 |