FFCP PHASE1:Hg19::chr12:109569182..109569200,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=32 | |EntrezGene=32 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=85 | |HGNC=85 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5C3 | |UniProt=F5H5C3 | ||
|association_with_transcript=19bp_to_ENST00000539864_5end | |association_with_transcript=19bp_to_ENST00000539864_5end | ||
|cluster_id=chr12:109569182..109569200,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_3_at_ACACB_5end | |description=CAGE_peak_3_at_ACACB_5end | ||
|id=chr12:109569182..109569200,+ | |id=chr12:109569182..109569200,+ | ||
|ontology_enrichment_celltype=CL:0000136!8.02e-18!15 | |ontology_enrichment_celltype=CL:0000136!8.02e-18!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.85e-29;13!CL:0002521;2.77e-08;3!CL:0002615;6.62e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.98e-25,15;CL:0002521,2.77e-08,3;CL:0002615,6.86e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.54e-80!115;UBERON:0001049!2.37e-29!57;UBERON:0005068!2.37e-29!57;UBERON:0006241!2.37e-29!57;UBERON:0007135!2.37e-29!57;UBERON:0002616!4.16e-23!59;UBERON:0003075!2.69e-22!86;UBERON:0007284!2.69e-22!86;UBERON:0002346!7.48e-22!90;UBERON:0003080!5.54e-21!42;UBERON:0001017!9.07e-21!82;UBERON:0005743!3.01e-20!86;UBERON:0000955!3.31e-20!69;UBERON:0006238!3.31e-20!69;UBERON:0002780!9.77e-20!41;UBERON:0001890!9.77e-20!41;UBERON:0006240!9.77e-20!41;UBERON:0000073!4.40e-18!94;UBERON:0001016!4.40e-18!94;UBERON:0002020!5.28e-16!34;UBERON:0003528!5.28e-16!34;UBERON:0001893!1.19e-15!34;UBERON:0002791!7.78e-15!33;UBERON:0000153!2.51e-14!129;UBERON:0007811!2.51e-14!129;UBERON:0001869!9.69e-14!32;UBERON:0000033!4.23e-13!123;UBERON:0003056!7.71e-13!61;UBERON:0000924!4.35e-12!173;UBERON:0006601!4.35e-12!173;UBERON:0004121!4.53e-12!169;UBERON:0002308!1.08e-11!9;UBERON:0000125!1.08e-11!9;UBERON:0002298!1.77e-11!8;UBERON:0000475!5.91e-11!365;UBERON:0004111!1.50e-10!241;UBERON:0003076!1.66e-09!15;UBERON:0003057!1.66e-09!15;UBERON:0002619!2.09e-09!22;UBERON:0009663!2.68e-09!7;UBERON:0000025!3.59e-09!194;UBERON:0002420!3.86e-09!9;UBERON:0007245!3.86e-09!9;UBERON:0010009!3.86e-09!9;UBERON:0010011!3.86e-09!9;UBERON:0000454!3.86e-09!9;UBERON:0001950!4.54e-09!20;UBERON:0000477!1.40e-08!286;UBERON:0000956!6.52e-08!25;UBERON:0000203!6.52e-08!25;UBERON:0000481!1.37e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!7.54e-80!115;UBERON:0001049!2.37e-29!57;UBERON:0005068!2.37e-29!57;UBERON:0006241!2.37e-29!57;UBERON:0007135!2.37e-29!57;UBERON:0002616!4.16e-23!59;UBERON:0003075!2.69e-22!86;UBERON:0007284!2.69e-22!86;UBERON:0002346!7.48e-22!90;UBERON:0003080!5.54e-21!42;UBERON:0001017!9.07e-21!82;UBERON:0005743!3.01e-20!86;UBERON:0000955!3.31e-20!69;UBERON:0006238!3.31e-20!69;UBERON:0002780!9.77e-20!41;UBERON:0001890!9.77e-20!41;UBERON:0006240!9.77e-20!41;UBERON:0000073!4.40e-18!94;UBERON:0001016!4.40e-18!94;UBERON:0002020!5.28e-16!34;UBERON:0003528!5.28e-16!34;UBERON:0001893!1.19e-15!34;UBERON:0002791!7.78e-15!33;UBERON:0000153!2.51e-14!129;UBERON:0007811!2.51e-14!129;UBERON:0001869!9.69e-14!32;UBERON:0000033!4.23e-13!123;UBERON:0003056!7.71e-13!61;UBERON:0000924!4.35e-12!173;UBERON:0006601!4.35e-12!173;UBERON:0004121!4.53e-12!169;UBERON:0002308!1.08e-11!9;UBERON:0000125!1.08e-11!9;UBERON:0002298!1.77e-11!8;UBERON:0000475!5.91e-11!365;UBERON:0004111!1.50e-10!241;UBERON:0003076!1.66e-09!15;UBERON:0003057!1.66e-09!15;UBERON:0002619!2.09e-09!22;UBERON:0009663!2.68e-09!7;UBERON:0000025!3.59e-09!194;UBERON:0002420!3.86e-09!9;UBERON:0007245!3.86e-09!9;UBERON:0010009!3.86e-09!9;UBERON:0010011!3.86e-09!9;UBERON:0000454!3.86e-09!9;UBERON:0001950!4.54e-09!20;UBERON:0000477!1.40e-08!286;UBERON:0000956!6.52e-08!25;UBERON:0000203!6.52e-08!25;UBERON:0000481!1.37e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.59e-11;114!UBERON:0002298;1.49e-08;6!UBERON:0002190;2.77e-08;3!UBERON:0000125;1.11e-07;9!UBERON:0002308;1.11e-07;9!UBERON:0001894;1.33e-07;7!UBERON:0001896;7.18e-07;3!UBERON:0006947;7.18e-07;3!UBERON:0005290;7.18e-07;3!UBERON:0004054;7.18e-07;3!UBERON:0002780;7.24e-07;41!UBERON:0001890;7.24e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.33e-45,114;UBERON:0001049,2.15e-11,56;UBERON:0005068,2.15e-11,56;UBERON:0006241,2.15e-11,56;UBERON:0007135,2.15e-11,56;UBERON:0000073,6.10e-11,53;UBERON:0002616,6.10e-11,53;UBERON:0002298,1.86e-08,6;UBERON:0002780,2.53e-08,41;UBERON:0001890,2.53e-08,41;UBERON:0003080,2.53e-08,41;UBERON:0006240,2.53e-08,41;UBERON:0002190,2.77e-08,3;UBERON:0000955,3.36e-08,68;UBERON:0006238,3.36e-08,68;UBERON:0003075,5.42e-08,82;UBERON:0007284,5.42e-08,82;UBERON:0000125,1.35e-07,9;UBERON:0002308,1.35e-07,9;UBERON:0001894,1.37e-07,7;UBERON:0006222,1.37e-07,7;UBERON:0002346,2.26e-07,86;UBERON:0001017,5.66e-07,81;UBERON:0010314,7.63e-07,132;UBERON:0006947,7.66e-07,3;UBERON:0004054,7.66e-07,3;UBERON:0001896,7.82e-07,3;UBERON:0005290,7.82e-07,3;UBERON:0010096,7.82e-07,3 | |||
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| ||
|short_description=p3@ACACB | |short_description=p3@ACACB | ||
}} | }} |
Latest revision as of 06:25, 16 September 2015
Short description: | p3@ACACB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACACB_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 19bp_to_ENST00000539864_5end |
EntrezGene: | ACACB |
HGNC: | 85 |
UniProt: | F5H5C3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.98e-25 | 15 |
subcutaneous fat cell | 2.77e-08 | 3 |
adipocyte of omentum tissue | 6.86e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.33e-45 | 114 |
neural tube | 2.15e-11 | 56 |
neural rod | 2.15e-11 | 56 |
future spinal cord | 2.15e-11 | 56 |
neural keel | 2.15e-11 | 56 |
regional part of nervous system | 6.10e-11 | 53 |
regional part of brain | 6.10e-11 | 53 |
brainstem | 1.86e-08 | 6 |
regional part of forebrain | 2.53e-08 | 41 |
forebrain | 2.53e-08 | 41 |
anterior neural tube | 2.53e-08 | 41 |
future forebrain | 2.53e-08 | 41 |
subcutaneous adipose tissue | 2.77e-08 | 3 |
brain | 3.36e-08 | 68 |
future brain | 3.36e-08 | 68 |
neural plate | 5.42e-08 | 82 |
presumptive neural plate | 5.42e-08 | 82 |
neural nucleus | 1.35e-07 | 9 |
nucleus of brain | 1.35e-07 | 9 |
diencephalon | 1.37e-07 | 7 |
future diencephalon | 1.37e-07 | 7 |
neurectoderm | 2.26e-07 | 86 |
central nervous system | 5.66e-07 | 81 |
structure with developmental contribution from neural crest | 7.63e-07 | 132 |
male genital duct | 7.66e-07 | 3 |
internal male genitalia | 7.66e-07 | 3 |
medulla oblongata | 7.82e-07 | 3 |
myelencephalon | 7.82e-07 | 3 |
future myelencephalon | 7.82e-07 | 3 |