FFCP PHASE1:Hg19::chr17:47073914..47073926,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:47073914..47073926,+ | |||
|description=CAGE_peak_at_chr17:47073914..47073926,+ | |description=CAGE_peak_at_chr17:47073914..47073926,+ | ||
|id=chr17:47073914..47073926,+ | |id=chr17:47073914..47073926,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.77e-08!254;CL:0002319!2.23e-08!25;CL:1000449!1.04e-07!16;CL:0002321!1.11e-07!248;CL:0000133!1.84e-07!59;CL:1000507!1.98e-07!12;CL:1000494!1.98e-07!12;CL:0000095!3.48e-07!17;CL:0000123!3.48e-07!17;CL:0000220!5.38e-07!246;CL:0000243!7.95e-07!15;CL:0000125!7.95e-07!15;CL:0000030!7.95e-07!15;CL:0000339!7.95e-07!15 | |ontology_enrichment_celltype=CL:0000066!1.77e-08!254;CL:0002319!2.23e-08!25;CL:1000449!1.04e-07!16;CL:0002321!1.11e-07!248;CL:0000133!1.84e-07!59;CL:1000507!1.98e-07!12;CL:1000494!1.98e-07!12;CL:0000095!3.48e-07!17;CL:0000123!3.48e-07!17;CL:0000220!5.38e-07!246;CL:0000243!7.95e-07!15;CL:0000125!7.95e-07!15;CL:0000030!7.95e-07!15;CL:0000339!7.95e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.02e-17;10!CL:1000494;2.02e-17;10!CL:1000449;1.87e-16;15!CL:0000669;5.30e-16;4!CL:0000650;1.11e-14;2!CL:1000500;1.11e-14;2!CL:1000618;1.11e-14;2!CL:1001318;1.11e-14;2!CL:0002262;1.11e-14;2!CL:1000398;1.11e-14;2!CL:0002173;1.11e-14;2!CL:1000497;1.84e-14;17!CL:0002518;1.84e-14;17!CL:0000182;4.04e-14;12!CL:0002681;1.37e-09;12!CL:0002584;1.37e-09;12!CL:1000746;1.53e-09;7!CL:1000612;1.53e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.58e-17,10;CL:1000494,2.58e-17,10;CL:1000449,2.21e-16,15;CL:0000669,1.37e-15,4;CL:0002262,5.92e-15,2;CL:1000398,5.92e-15,2;CL:1000497,2.14e-14,17;CL:0002518,2.14e-14,17;CL:0000650,2.73e-14,2;CL:1000500,2.73e-14,2;CL:1000618,2.73e-14,2;CL:1001318,2.73e-14,2;CL:0002173,2.73e-14,2;CL:0000182,5.15e-14,12;CL:0002681,1.84e-09,12;CL:0002584,1.84e-09,12;CL:1000746,2.17e-09,7;CL:1000612,2.17e-09,7;CL:0000066,4.77e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.43e-07;31 | |||
|ontology_enrichment_disease=DOID:3095!1.89e-10!22;DOID:2994!1.89e-10!22;DOID:0050687!1.54e-09!143;DOID:162!1.05e-07!235;DOID:14566!1.39e-07!239;DOID:171!4.95e-07!10 | |ontology_enrichment_disease=DOID:3095!1.89e-10!22;DOID:2994!1.89e-10!22;DOID:0050687!1.54e-09!143;DOID:162!1.05e-07!235;DOID:14566!1.39e-07!239;DOID:171!4.95e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060085;3.44e-08;1!DOID:3165;3.44e-08;1!DOID:0060121;3.44e-08;1!DOID:2438;3.44e-08;1!DOID:4418;3.44e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.10e-08,1;DOID:3165,3.10e-08,1;DOID:0060121,3.10e-08,1;DOID:2438,3.10e-08,1;DOID:4418,3.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005172!6.35e-08!55;UBERON:0005173!6.35e-08!55;UBERON:0004211!1.04e-07!16;UBERON:0001285!1.04e-07!16;UBERON:0007684!1.04e-07!16;UBERON:0003220!1.04e-07!16;UBERON:0004208!1.04e-07!16;UBERON:0009773!1.98e-07!12;UBERON:0001231!1.98e-07!12;UBERON:0004810!1.98e-07!12;UBERON:0006555!4.43e-07!17;UBERON:0005103!4.43e-07!17;UBERON:0000083!4.43e-07!17;UBERON:0009201!4.43e-07!17;UBERON:0004819!4.43e-07!17;UBERON:0006553!4.43e-07!17;UBERON:0003074!4.43e-07!17;UBERON:0003060!4.43e-07!17 | |ontology_enrichment_uberon=UBERON:0005172!6.35e-08!55;UBERON:0005173!6.35e-08!55;UBERON:0004211!1.04e-07!16;UBERON:0001285!1.04e-07!16;UBERON:0007684!1.04e-07!16;UBERON:0003220!1.04e-07!16;UBERON:0004208!1.04e-07!16;UBERON:0009773!1.98e-07!12;UBERON:0001231!1.98e-07!12;UBERON:0004810!1.98e-07!12;UBERON:0006555!4.43e-07!17;UBERON:0005103!4.43e-07!17;UBERON:0000083!4.43e-07!17;UBERON:0009201!4.43e-07!17;UBERON:0004819!4.43e-07!17;UBERON:0006553!4.43e-07!17;UBERON:0003074!4.43e-07!17;UBERON:0003060!4.43e-07!17 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.15e-17;24!UBERON:0011143;1.15e-17;24!UBERON:0004211;2.02e-17;10!UBERON:0009773;2.02e-17;10!UBERON:0001231;2.02e-17;10!UBERON:0004810;2.02e-17;10!UBERON:0006555;1.87e-16;15!UBERON:0004819;1.87e-16;15!UBERON:0001285;1.87e-16;15!UBERON:0007684;1.87e-16;15!UBERON:0000353;2.96e-16;15!UBERON:0001281;1.11e-14;2!UBERON:0003497;1.11e-14;2!UBERON:0003909;1.11e-14;2!UBERON:0003567;1.11e-14;2!UBERON:0003835;1.11e-14;2!UBERON:0003838;1.11e-14;2!UBERON:0003586;1.11e-14;2!UBERON:0005169;1.11e-14;2!UBERON:0002321;1.11e-14;2!UBERON:0005215;1.11e-14;2!UBERON:0002303;1.11e-14;2!UBERON:0002319;1.11e-14;2!UBERON:0000489;1.99e-14;29!UBERON:0005172;4.33e-14;52!UBERON:0005173;4.33e-14;52!UBERON:0006554;6.58e-14;30!UBERON:0001008;6.58e-14;30!UBERON:0002417;1.87e-12;58!UBERON:0000916;1.87e-12;58!UBERON:0001280;4.30e-10;3!UBERON:0004647;4.30e-10;3!UBERON:0001225;1.37e-09;12!UBERON:0008987;1.37e-09;12!UBERON:0000074;1.53e-09;7!UBERON:0001229;1.53e-09;7!UBERON:0002107;7.50e-09;19!UBERON:0006925;7.50e-09;19!UBERON:0003891;8.81e-08;4!UBERON:0001851;1.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.36e-19,54;UBERON:0005173,3.36e-19,54;UBERON:0004810,2.58e-17,10;UBERON:0002417,4.91e-17,60;UBERON:0000916,4.91e-17,60;UBERON:0004211,2.21e-16,15;UBERON:0009773,2.21e-16,15;UBERON:0001231,2.21e-16,15;UBERON:0001285,2.21e-16,15;UBERON:0007684,2.21e-16,15;UBERON:0004208,2.21e-16,15;UBERON:0000353,3.32e-16,15;UBERON:0002113,3.32e-16,26;UBERON:0003918,3.32e-16,26;UBERON:0011143,3.32e-16,26;UBERON:0005095,3.32e-16,26;UBERON:0007687,3.32e-16,26;UBERON:0006555,2.51e-15,16;UBERON:0004819,2.51e-15,16;UBERON:0001281,5.92e-15,2;UBERON:0003497,5.92e-15,2;UBERON:0003909,5.92e-15,2;UBERON:0003835,5.92e-15,2;UBERON:0003567,2.73e-14,2;UBERON:0003838,2.73e-14,2;UBERON:0003586,2.73e-14,2;UBERON:0005169,2.73e-14,2;UBERON:0002321,2.73e-14,2;UBERON:0005215,2.73e-14,2;UBERON:0002303,2.73e-14,2;UBERON:0002319,2.73e-14,2;UBERON:0000489,2.07e-13,31;UBERON:0005177,9.03e-11,101;UBERON:0001280,2.84e-10,3;UBERON:0004647,2.84e-10,3;UBERON:0005171,2.84e-10,3;UBERON:0001225,1.84e-09,12;UBERON:0008987,1.84e-09,12;UBERON:0009569,1.88e-09,112;UBERON:0010532,2.17e-09,7;UBERON:0000074,2.17e-09,7;UBERON:0001229,2.17e-09,7;UBERON:0001230,2.17e-09,7;UBERON:0003220,2.17e-09,7;UBERON:0005749,2.17e-09,7;UBERON:0004199,2.17e-09,7;UBERON:0004209,2.17e-09,7;UBERON:0004198,2.17e-09,7;UBERON:0000058,6.28e-09,19;UBERON:0002107,8.69e-09,19;UBERON:0006925,8.69e-09,19;UBERON:0008836,8.69e-09,19;UBERON:0006554,1.85e-08,47;UBERON:0005103,2.83e-08,8;UBERON:0000083,2.83e-08,8;UBERON:0009201,2.83e-08,8;UBERON:0006553,2.83e-08,8;UBERON:0003074,2.83e-08,8;UBERON:0003060,2.83e-08,8;UBERON:0001008,2.94e-08,48;UBERON:0001851,1.37e-07,15;UBERON:0003891,1.37e-07,4;UBERON:0008835,1.46e-07,22;UBERON:0003894,1.46e-07,22;UBERON:0003914,1.51e-07,117;UBERON:0000080,2.09e-07,9;UBERON:0002120,2.09e-07,9;UBERON:0004875,2.09e-07,9;UBERON:0005721,2.09e-07,9;UBERON:0005754,2.09e-07,9;UBERON:0007297,2.09e-07,9;UBERON:0009854,3.19e-07,23;UBERON:0003103,6.28e-07,68 | |||
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| ||
|short_description=p@chr17:47073914..47073926,+ | |short_description=p@chr17:47073914..47073926,+ | ||
}} | }} |
Latest revision as of 18:17, 25 July 2015
Short description: | p@chr17:47073914..47073926, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:47073914..47073926, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.58e-17 | 10 |
nephron tubule epithelial cell | 2.58e-17 | 10 |
epithelial cell of nephron | 2.21e-16 | 15 |
pericyte cell | 1.37e-15 | 4 |
endothelial cell of sinusoid | 5.92e-15 | 2 |
endothelial cell of hepatic sinusoid | 5.92e-15 | 2 |
kidney cell | 2.14e-14 | 17 |
kidney epithelial cell | 2.14e-14 | 17 |
mesangial cell | 2.73e-14 | 2 |
kidney interstitial cell | 2.73e-14 | 2 |
juxtaglomerular complex cell | 2.73e-14 | 2 |
renal interstitial pericyte | 2.73e-14 | 2 |
extraglomerular mesangial cell | 2.73e-14 | 2 |
hepatocyte | 5.15e-14 | 12 |
kidney cortical cell | 1.84e-09 | 12 |
renal cortical epithelial cell | 1.84e-09 | 12 |
glomerular cell | 2.17e-09 | 7 |
kidney corpuscule cell | 2.17e-09 | 7 |
epithelial cell | 4.77e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.10e-08 | 1 |
skin benign neoplasm | 3.10e-08 | 1 |
integumentary system benign neoplasm | 3.10e-08 | 1 |
dermis tumor | 3.10e-08 | 1 |
cutaneous fibrous histiocytoma | 3.10e-08 | 1 |