FFCP PHASE1:Hg19::chr1:206317523..206317535,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1510 | |EntrezGene=1510 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2530 | |HGNC=2530 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_ENST00000360218_5end | |association_with_transcript=50bp_to_ENST00000360218_5end | ||
|cluster_id=chr1:206317523..206317535,+ | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_3_at_CTSE_5end | |description=CAGE_peak_3_at_CTSE_5end | ||
|id=chr1:206317523..206317535,+ | |id=chr1:206317523..206317535,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.34e-09!5;CL:0002178!1.25e-07!3 | |ontology_enrichment_celltype=CL:0002322!1.34e-09!5;CL:0002178!1.25e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.32e-13;1 | |||
|ontology_enrichment_disease=DOID:3493!1.79e-11!2 | |ontology_enrichment_disease=DOID:3493!1.79e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.74e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.74e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.24e-12!35;UBERON:0004921!5.10e-11!129;UBERON:0004185!5.10e-11!129;UBERON:0001007!9.41e-11!155;UBERON:0001555!9.41e-11!155;UBERON:0007026!9.41e-11!155;UBERON:0000945!2.59e-10!8;UBERON:0010039!2.59e-10!8;UBERON:0004119!1.79e-09!169;UBERON:0000925!1.79e-09!169;UBERON:0006595!1.79e-09!169;UBERON:0007023!8.82e-08!115;UBERON:0000077!2.12e-07!130 | |ontology_enrichment_uberon=UBERON:0005409!2.24e-12!35;UBERON:0004921!5.10e-11!129;UBERON:0004185!5.10e-11!129;UBERON:0001007!9.41e-11!155;UBERON:0001555!9.41e-11!155;UBERON:0007026!9.41e-11!155;UBERON:0000945!2.59e-10!8;UBERON:0010039!2.59e-10!8;UBERON:0004119!1.79e-09!169;UBERON:0000925!1.79e-09!169;UBERON:0006595!1.79e-09!169;UBERON:0007023!8.82e-08!115;UBERON:0000077!2.12e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.24e-21;4!UBERON:0002171;3.99e-13;1!UBERON:0006518;3.99e-13;1!UBERON:0008949;3.99e-13;1!UBERON:0000101;3.99e-13;1!UBERON:0002167;3.99e-13;1!UBERON:0005409;7.75e-13;22!UBERON:0000160;9.70e-11;17!UBERON:0004921;1.29e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.28e-21,4;UBERON:0002171,4.23e-13,1;UBERON:0006518,4.23e-13,1;UBERON:0008949,4.23e-13,1;UBERON:0000101,4.23e-13,1;UBERON:0002167,4.23e-13,1;UBERON:0005409,2.44e-11,25;UBERON:0000160,9.95e-11,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,1.01489521846434,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7918228694074,0,0,0,0,0.067401132980677,0,0,0,0,0,0,10.8891644443797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75157278431345,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,6.19366992892629,0,3.31391244277756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,7.31507549893617,0,0,0,0,0,0,0,0,0,0,5.17066859323229,1.09279780251979,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,113.932476566457,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.381882949668989,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,1.01489521846434,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7918228694074,0,0,0,0,0.067401132980677,0,0,0,0,0,0,10.8891644443797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75157278431345,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,6.19366992892629,0,3.31391244277756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,7.31507549893617,0,0,0,0,0,0,0,0,0,0,5.17066859323229,1.09279780251979,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,113.932476566457,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.381882949668989,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@CTSE | |short_description=p3@CTSE | ||
}} | }} |
Latest revision as of 04:33, 20 September 2015
Short description: | p3@CTSE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CTSE_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 50bp_to_ENST00000360218_5end |
EntrezGene: | CTSE |
HGNC: | 2530 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.28e-21 | 4 |
lower lobe of right lung | 4.23e-13 | 1 |
right lung lobe | 4.23e-13 | 1 |
lower lobe of lung | 4.23e-13 | 1 |
lobe of lung | 4.23e-13 | 1 |
right lung | 4.23e-13 | 1 |
gastrointestinal system | 2.44e-11 | 25 |
intestine | 9.95e-11 | 17 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.74e-07 | 2 |