FFCP PHASE1:Hg19::chr1:211752522..211752547,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7779 | |EntrezGene=7779 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11012 | |HGNC=11012 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6M5 | |UniProt=Q9Y6M5 | ||
|association_with_transcript=-423bp_to_NM_021194,uc001hio.1_5end | |association_with_transcript=-423bp_to_NM_021194,uc001hio.1_5end | ||
|cluster_id=chr1:211752522..211752547,- | |||
|description=CAGE_peak_3_at_SLC30A1_5end | |description=CAGE_peak_3_at_SLC30A1_5end | ||
|id=chr1:211752522..211752547,- | |id=chr1:211752522..211752547,- | ||
|ontology_enrichment_celltype=CL:0000839!6.26e-13!70;CL:0002194!5.97e-12!63;CL:0000576!5.97e-12!63;CL:0000040!5.97e-12!63;CL:0000559!5.97e-12!63;CL:0000766!1.03e-11!76;CL:0002009!1.69e-11!65;CL:0000557!7.66e-11!71;CL:0000860!7.12e-10!45;CL:0002057!2.37e-08!42 | |ontology_enrichment_celltype=CL:0000839!6.26e-13!70;CL:0002194!5.97e-12!63;CL:0000576!5.97e-12!63;CL:0000040!5.97e-12!63;CL:0000559!5.97e-12!63;CL:0000766!1.03e-11!76;CL:0002009!1.69e-11!65;CL:0000557!7.66e-11!71;CL:0000860!7.12e-10!45;CL:0002057!2.37e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.10e-10;33!CL:0002057;7.10e-10;33!CL:0000473;1.74e-09;39!CL:0000234;1.74e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,2.18e-11,66;CL:0002194,2.17e-10,59;CL:0000576,2.17e-10,59;CL:0000040,2.17e-10,59;CL:0000559,2.17e-10,59;CL:0000766,3.19e-10,72;CL:0002009,4.99e-10,61;CL:0000473,1.37e-09,48;CL:0000234,1.37e-09,48;CL:0000557,1.58e-09,67;CL:0000860,2.25e-08,42;CL:0002057,2.25e-08,42 | |||
|ontology_enrichment_development_v019=CL:0002057;9.29e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.50e-13!659;UBERON:0000062!4.79e-13!511;UBERON:0000480!1.85e-12!626;UBERON:0000467!3.28e-12!625;UBERON:0000922!1.95e-11!612;UBERON:0002050!2.32e-11!605;UBERON:0005423!2.32e-11!605;UBERON:0000923!3.74e-11!604;UBERON:0005291!3.74e-11!604;UBERON:0006598!3.74e-11!604;UBERON:0002532!3.74e-11!604;UBERON:0002405!1.11e-10!115;UBERON:0004119!6.57e-10!169;UBERON:0000925!6.57e-10!169;UBERON:0006595!6.57e-10!169;UBERON:0001007!2.19e-08!155;UBERON:0001555!2.19e-08!155;UBERON:0007026!2.19e-08!155;UBERON:0002371!5.87e-08!80;UBERON:0004921!8.55e-08!129;UBERON:0004185!8.55e-08!129;UBERON:0007023!1.60e-07!115;UBERON:0002390!5.45e-07!102;UBERON:0003061!5.45e-07!102;UBERON:0000926!6.44e-07!448;UBERON:0004120!6.44e-07!448;UBERON:0006603!6.44e-07!448;UBERON:0001474!7.18e-07!86;UBERON:0002193!8.86e-07!112 | |ontology_enrichment_uberon=UBERON:0000468!1.50e-13!659;UBERON:0000062!4.79e-13!511;UBERON:0000480!1.85e-12!626;UBERON:0000467!3.28e-12!625;UBERON:0000922!1.95e-11!612;UBERON:0002050!2.32e-11!605;UBERON:0005423!2.32e-11!605;UBERON:0000923!3.74e-11!604;UBERON:0005291!3.74e-11!604;UBERON:0006598!3.74e-11!604;UBERON:0002532!3.74e-11!604;UBERON:0002405!1.11e-10!115;UBERON:0004119!6.57e-10!169;UBERON:0000925!6.57e-10!169;UBERON:0006595!6.57e-10!169;UBERON:0001007!2.19e-08!155;UBERON:0001555!2.19e-08!155;UBERON:0007026!2.19e-08!155;UBERON:0002371!5.87e-08!80;UBERON:0004921!8.55e-08!129;UBERON:0004185!8.55e-08!129;UBERON:0007023!1.60e-07!115;UBERON:0002390!5.45e-07!102;UBERON:0003061!5.45e-07!102;UBERON:0000926!6.44e-07!448;UBERON:0004120!6.44e-07!448;UBERON:0006603!6.44e-07!448;UBERON:0001474!7.18e-07!86;UBERON:0002193!8.86e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,3.32e-10,592;UBERON:0004119,9.26e-10,160;UBERON:0000925,9.26e-10,160;UBERON:0006595,9.26e-10,160;UBERON:0000923,9.64e-10,560;UBERON:0010316,9.64e-10,560;UBERON:0005291,9.64e-10,560;UBERON:0006598,9.64e-10,560;UBERON:0010317,9.64e-10,560;UBERON:0002532,9.64e-10,560;UBERON:0002050,2.71e-09,564;UBERON:0005423,4.17e-09,581;UBERON:0001007,2.49e-08,145;UBERON:0001555,2.49e-08,145;UBERON:0007026,2.49e-08,145;UBERON:0004921,1.78e-07,118;UBERON:0007023,2.86e-07,114;UBERON:0002405,5.93e-07,93;UBERON:0002371,6.18e-07,76 | |||
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| ||
|short_description=p3@SLC30A1 | |short_description=p3@SLC30A1 | ||
}} | }} |
Latest revision as of 23:02, 24 September 2015
Short description: | p3@SLC30A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC30A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -423bp_to_NM_021194, uc001hio.1_5end |
EntrezGene: | SLC30A1 |
HGNC: | 11012 |
UniProt: | Q9Y6M5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 2.18e-11 | 66 |
monopoietic cell | 2.17e-10 | 59 |
monocyte | 2.17e-10 | 59 |
monoblast | 2.17e-10 | 59 |
promonocyte | 2.17e-10 | 59 |
myeloid leukocyte | 3.19e-10 | 72 |
macrophage dendritic cell progenitor | 4.99e-10 | 61 |
defensive cell | 1.37e-09 | 48 |
phagocyte | 1.37e-09 | 48 |
granulocyte monocyte progenitor cell | 1.58e-09 | 67 |
classical monocyte | 2.25e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.25e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
embryo | 3.32e-10 | 592 |
endoderm-derived structure | 9.26e-10 | 160 |
endoderm | 9.26e-10 | 160 |
presumptive endoderm | 9.26e-10 | 160 |
germ layer | 9.64e-10 | 560 |
germ layer / neural crest | 9.64e-10 | 560 |
embryonic tissue | 9.64e-10 | 560 |
presumptive structure | 9.64e-10 | 560 |
germ layer / neural crest derived structure | 9.64e-10 | 560 |
epiblast (generic) | 9.64e-10 | 560 |
embryonic structure | 2.71e-09 | 564 |
developing anatomical structure | 4.17e-09 | 581 |
digestive system | 2.49e-08 | 145 |
digestive tract | 2.49e-08 | 145 |
primitive gut | 2.49e-08 | 145 |
subdivision of digestive tract | 1.78e-07 | 118 |
adult organism | 2.86e-07 | 114 |
immune system | 5.93e-07 | 93 |
bone marrow | 6.18e-07 | 76 |