FFCP PHASE1:Hg19::chr1:82165119..82165148,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23266 | |EntrezGene=23266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18582 | |HGNC=18582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-306bp_to_ENST00000359929,uc001dit.3_5end | |association_with_transcript=-306bp_to_ENST00000359929,uc001dit.3_5end | ||
|cluster_id=chr1:82165119..82165148,+ | |||
|coexpression_cluster_id=C224 | |||
|description=CAGE_peak_5_at_LPHN2_5end | |description=CAGE_peak_5_at_LPHN2_5end | ||
|id=chr1:82165119..82165148,+ | |id=chr1:82165119..82165148,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002149;4.04e-09;6!CL:0002255;4.04e-09;6!CL:0000313;2.22e-07;1!CL:0000511;3.08e-07;1!CL:0002625;3.08e-07;1!CL:0000216;3.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,3.42e-09,6;CL:0002255,3.42e-09,6;CL:0000313,2.22e-07,1;CL:0000511,2.99e-07,1;CL:0002625,2.99e-07,1;CL:0000216,2.99e-07,1;CL:0000066,7.82e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.82e-07;1!UBERON:0009143;5.06e-07;1 | |||
|ontology_enrichment_disease=DOID:193!9.82e-12!29;DOID:120!1.65e-11!27;DOID:305!9.79e-08!106;DOID:1749!3.41e-07!14;DOID:2394!6.06e-07!14 | |ontology_enrichment_disease=DOID:193!9.82e-12!29;DOID:120!1.65e-11!27;DOID:305!9.79e-08!106;DOID:1749!3.41e-07!14;DOID:2394!6.06e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:120;1.27e-09;27!DOID:3001;4.04e-09;6!DOID:193;6.79e-09;29!DOID:299;1.20e-07;25!DOID:2152;2.22e-07;1!DOID:178;2.36e-07;1!DOID:326;2.36e-07;1!DOID:3978;2.36e-07;1!DOID:3394;2.36e-07;1!DOID:5844;2.36e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.45e-10,143;DOID:120,1.14e-09,27;DOID:3001,3.42e-09,6;DOID:193,6.14e-09,29;DOID:305,1.03e-08,106;DOID:299,1.06e-07,25;DOID:2152,2.22e-07,1;DOID:178,2.36e-07,1;DOID:326,2.36e-07,1;DOID:3978,2.36e-07,1;DOID:3394,2.36e-07,1;DOID:5844,2.36e-07,1;DOID:162,7.29e-07,235;DOID:3111,8.98e-07,1;DOID:3603,8.98e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.40e-07!59;UBERON:0000990!1.40e-07!59;UBERON:0003134!2.23e-07!37;UBERON:0000474!2.23e-07!37;UBERON:0003102!2.24e-07!95;UBERON:0000161!2.74e-07!35;UBERON:0003133!7.66e-07!48 | |ontology_enrichment_uberon=UBERON:0005156!1.40e-07!59;UBERON:0000990!1.40e-07!59;UBERON:0003134!2.23e-07!37;UBERON:0000474!2.23e-07!37;UBERON:0003102!2.24e-07!95;UBERON:0000161!2.74e-07!35;UBERON:0003133!7.66e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0004909;6.06e-13;2!UBERON:0004911;2.22e-07;1!UBERON:0001136;3.08e-07;1!UBERON:0001343;3.08e-07;1!UBERON:0004910;3.08e-07;1!UBERON:0004813;3.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004909,5.89e-13,2;UBERON:0004911,2.22e-07,1;UBERON:0001136,2.99e-07,1;UBERON:0001343,2.99e-07,1;UBERON:0004910,2.99e-07,1;UBERON:0005154,2.99e-07,1;UBERON:0005295,2.99e-07,1;UBERON:0004813,2.99e-07,1;UBERON:0005297,2.99e-07,1;UBERON:0005294,2.99e-07,1;UBERON:0010141,2.99e-07,1;UBERON:0005891,2.99e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.85870796139317,0,0.251085279189606,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,1.85372853138506,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0,0.710019185033229,0.201504196455281,0,0,0.272746120590835,0.573609190778008,0.243947412259191,0,0.348581828608555,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,1.73895607462615,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.61384789315225,0.280660094433074,0.640695746278505,0,0.160853921143607,0,0.154209693802656,0,0,0,0.232420756919918,0.120859449591622,0,1.47329582297434,0.114814448164607,0,0,0,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,6.42735719376638,0,0.308097234229289,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0.606547444719948,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,1.90995587790152,0,0.614321404198464,0,0.140669416410513,0,0,0,0,0,0,0,0,0.933118762985422,1.61763032065188,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,2.83665218121524,0,0,0,0,0,0,0,0,0.219385397153973,0,0.697118721393016,0.384751292518985,0,2.07507513949254,0.269272933229316,2.60753692612819,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.843992258112108,31.8303975910338,0,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,3.32819215231533,6.24815058006471,0.391969589657511,2.35059857767087,0,0,0,0,0,2.23074737923365,0,3.61569185248852,0,0,0,0.977756913674015,12.2642994984847,0,0,0,0,0,0,0,0.942776138467182,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,14.3768880359274,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.275078873194468,0,0.2249738915515,0,0.121499113316049,0.335434687599266,1.18208560948797,0.209818352539992,0.105600336519406,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0.228840068396924,0,0.310874401165561,0,0,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0.150257608997218,2.66563648518157,0.406870733204662,0,0.322231671127465,0.464033759878494,0.796191777397232,0,0,0,0,0,0.214441591374926,0,3.85400073370863,0,0,0,0,0.438568099157414,11.838172778374,0,0,0,0,0,0,0,0,0,0,0.983091635014877,1.47918486351039,0,0,0,0,0,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0,0,0.785720083444267,0,0.591424344868181,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0.685952037749674,0,0.197318320688547,0,0.222462803784138,0.156986185701028,0,2.24217730651031,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.17071847709395,1.38251932362818,0,0.118332000730565,0.255640214277473,0,0.9164274741762,0,0,27.7401470858525,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.535661815816973,1.05868461514708,3.5306201343234,0.730336388246517,0,0,0,0,0,0,0.371995018166751,0,0,0,0.546327859818478,0,0.61193297845189,0,0.275684698604535,0,0,0,0,0,1.49263787330687,0.23806443146374,0,0.124149428591716,0,0,0,0.870866991587845,0.684466602170562,1.01028079521881,0.358611026963382,0,0.0814032686109745,1.06727345877715,0,0,7.03922827210363,0.122241444182866,0,0,0,0 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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.85870796139317,0,0.251085279189606,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,1.85372853138506,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0,0.710019185033229,0.201504196455281,0,0,0.272746120590835,0.573609190778008,0.243947412259191,0,0.348581828608555,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,1.73895607462615,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.61384789315225,0.280660094433074,0.640695746278505,0,0.160853921143607,0,0.154209693802656,0,0,0,0.232420756919918,0.120859449591622,0,1.47329582297434,0.114814448164607,0,0,0,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,6.42735719376638,0,0.308097234229289,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0.606547444719948,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,1.90995587790152,0,0.614321404198464,0,0.140669416410513,0,0,0,0,0,0,0,0,0.933118762985422,1.61763032065188,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,2.83665218121524,0,0,0,0,0,0,0,0,0.219385397153973,0,0.697118721393016,0.384751292518985,0,2.07507513949254,0.269272933229316,2.60753692612819,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.843992258112108,31.8303975910338,0,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,3.32819215231533,6.24815058006471,0.391969589657511,2.35059857767087,0,0,0,0,0,2.23074737923365,0,3.61569185248852,0,0,0,0.977756913674015,12.2642994984847,0,0,0,0,0,0,0,0.942776138467182,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,14.3768880359274,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.275078873194468,0,0.2249738915515,0,0.121499113316049,0.335434687599266,1.18208560948797,0.209818352539992,0.105600336519406,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0.228840068396924,0,0.310874401165561,0,0,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0.150257608997218,2.66563648518157,0.406870733204662,0,0.322231671127465,0.464033759878494,0.796191777397232,0,0,0,0,0,0.214441591374926,0,3.85400073370863,0,0,0,0,0.438568099157414,11.838172778374,0,0,0,0,0,0,0,0,0,0,0.983091635014877,1.47918486351039,0,0,0,0,0,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0,0,0.785720083444267,0,0.591424344868181,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0.685952037749674,0,0.197318320688547,0,0.222462803784138,0.156986185701028,0,2.24217730651031,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.17071847709395,1.38251932362818,0,0.118332000730565,0.255640214277473,0,0.9164274741762,0,0,27.7401470858525,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.535661815816973,1.05868461514708,3.5306201343234,0.730336388246517,0,0,0,0,0,0,0.371995018166751,0,0,0,0.546327859818478,0,0.61193297845189,0,0.275684698604535,0,0,0,0,0,1.49263787330687,0.23806443146374,0,0.124149428591716,0,0,0,0.870866991587845,0.684466602170562,1.01028079521881,0.358611026963382,0,0.0814032686109745,1.06727345877715,0,0,7.03922827210363,0.122241444182866,0,0,0,0 | ||
|short_description=p5@LPHN2 | |short_description=p5@LPHN2 | ||
}} | }} |
Latest revision as of 09:59, 19 September 2015
Short description: | p5@LPHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LPHN2_5end |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | -306bp_to_ENST00000359929, uc001dit.3_5end |
EntrezGene: | LPHN2 |
HGNC: | 18582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 3.42e-09 | 6 |
stromal cell of endometrium | 3.42e-09 | 6 |
serous secreting cell | 2.22e-07 | 1 |
androgen binding protein secreting cell | 2.99e-07 | 1 |
seminiferous tubule epithelial cell | 2.99e-07 | 1 |
Sertoli cell | 2.99e-07 | 1 |
epithelial cell | 7.82e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelium of gonad | 5.89e-13 | 2 |
epithelium of female gonad | 2.22e-07 | 1 |
mesothelium | 2.99e-07 | 1 |
seminiferous tubule of testis | 2.99e-07 | 1 |
epithelium of male gonad | 2.99e-07 | 1 |
epithelial cord | 2.99e-07 | 1 |
sex cord | 2.99e-07 | 1 |
seminiferous tubule epithelium | 2.99e-07 | 1 |
testis sex cord | 2.99e-07 | 1 |
genital ridge | 2.99e-07 | 1 |
primitive sex cord of indifferent gonad | 2.99e-07 | 1 |
coelomic epithelium | 2.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.45e-10 | 143 |
female reproductive organ cancer | 1.14e-09 | 27 |
female reproductive endometrioid cancer | 3.42e-09 | 6 |
reproductive organ cancer | 6.14e-09 | 29 |
carcinoma | 1.03e-08 | 106 |
adenocarcinoma | 1.06e-07 | 25 |
ovary epithelial cancer | 2.22e-07 | 1 |
vascular disease | 2.36e-07 | 1 |
ischemia | 2.36e-07 | 1 |
extrinsic cardiomyopathy | 2.36e-07 | 1 |
myocardial ischemia | 2.36e-07 | 1 |
myocardial infarction | 2.36e-07 | 1 |
cancer | 7.29e-07 | 235 |
cystadenocarcinoma | 8.98e-07 | 1 |
mucinous cystadenocarcinoma | 8.98e-07 | 1 |