FFCP PHASE1:Hg19::chr2:30143760..30143777,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=238 | |EntrezGene=238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=427 | |HGNC=427 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPW7 | |UniProt=E7EPW7 | ||
|association_with_transcript=-235bp_to_ENST00000431873_5end | |association_with_transcript=-235bp_to_ENST00000431873_5end | ||
|cluster_id=chr2:30143760..30143777,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_5_at_ALK_5end | |description=CAGE_peak_5_at_ALK_5end | ||
|id=chr2:30143760..30143777,- | |id=chr2:30143760..30143777,- | ||
|ontology_enrichment_celltype=CL:0000047!4.42e-12!8;CL:0000133!2.72e-09!59;CL:0000221!8.81e-08!71 | |ontology_enrichment_celltype=CL:0000047!4.42e-12!8;CL:0000133!2.72e-09!59;CL:0000221!8.81e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.52e-50;2!CL:0000333;4.21e-21;5!CL:0002321;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.07e-13,8;CL:0000133,9.44e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000133;7.96e-07;59 | |||
|ontology_enrichment_disease=DOID:169!6.72e-34!6;DOID:171!1.12e-20!10;DOID:3095!8.86e-10!22;DOID:2994!8.86e-10!22 | |ontology_enrichment_disease=DOID:169!6.72e-34!6;DOID:171!1.12e-20!10;DOID:3095!8.86e-10!22;DOID:2994!8.86e-10!22 | ||
|ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.70e-40!5;UBERON:0002410!1.70e-40!5;UBERON:0002022!6.40e-23!1;UBERON:0000010!6.95e-23!8;UBERON:0000073!3.66e-18!94;UBERON:0001016!3.66e-18!94;UBERON:0001873!2.59e-12!2;UBERON:0010122!2.59e-12!2;UBERON:0004121!3.83e-10!169;UBERON:0000924!6.62e-10!173;UBERON:0006601!6.62e-10!173;UBERON:0001017!2.11e-09!82;UBERON:0005743!5.67e-09!86;UBERON:0005383!1.21e-08!3;UBERON:0005382!1.21e-08!3;UBERON:0001896!1.40e-08!3;UBERON:0005290!1.40e-08!3;UBERON:0010096!1.40e-08!3;UBERON:0000369!8.61e-07!4;UBERON:0002435!8.61e-07!4;UBERON:0000204!8.61e-07!4;UBERON:0010082!8.61e-07!4 | |ontology_enrichment_uberon=UBERON:0000013!1.70e-40!5;UBERON:0002410!1.70e-40!5;UBERON:0002022!6.40e-23!1;UBERON:0000010!6.95e-23!8;UBERON:0000073!3.66e-18!94;UBERON:0001016!3.66e-18!94;UBERON:0001873!2.59e-12!2;UBERON:0010122!2.59e-12!2;UBERON:0004121!3.83e-10!169;UBERON:0000924!6.62e-10!173;UBERON:0006601!6.62e-10!173;UBERON:0001017!2.11e-09!82;UBERON:0005743!5.67e-09!86;UBERON:0005383!1.21e-08!3;UBERON:0005382!1.21e-08!3;UBERON:0001896!1.40e-08!3;UBERON:0005290!1.40e-08!3;UBERON:0010096!1.40e-08!3;UBERON:0000369!8.61e-07!4;UBERON:0002435!8.61e-07!4;UBERON:0000204!8.61e-07!4;UBERON:0010082!8.61e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0000010;2.19e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000010,2.19e-12,8 | |||
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|short_description=p5@ALK | |short_description=p5@ALK | ||
}} | }} |
Latest revision as of 21:31, 16 September 2015
Short description: | p5@ALK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ALK_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -235bp_to_ENST00000431873_5end |
EntrezGene: | ALK |
HGNC: | 427 |
UniProt: | E7EPW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.07e-13 | 8 |
neurectodermal cell | 9.44e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |