FFCP PHASE1:Hg19::chr11:122027745..122027771,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:122027745..122027771,- | |||
|coexpression_cluster_id=C1615 | |coexpression_cluster_id=C1615 | ||
|description=CAGE_peak_at_chr11:122027745..122027771,- | |description=CAGE_peak_at_chr11:122027745..122027771,- | ||
|id=chr11:122027745..122027771,- | |id=chr11:122027745..122027771,- | ||
|ontology_enrichment_celltype=CL:0000055!4.03e-25!180;CL:0000057!5.39e-11!75;CL:0002334!1.19e-09!12;CL:0000243!2.33e-08!15;CL:0000125!2.33e-08!15;CL:0000030!2.33e-08!15;CL:0000339!2.33e-08!15;CL:0002319!2.46e-07!25;CL:0000095!4.46e-07!17;CL:0000123!4.46e-07!17 | |ontology_enrichment_celltype=CL:0000055!4.03e-25!180;CL:0000057!5.39e-11!75;CL:0002334!1.19e-09!12;CL:0000243!2.33e-08!15;CL:0000125!2.33e-08!15;CL:0000030!2.33e-08!15;CL:0000339!2.33e-08!15;CL:0002319!2.46e-07!25;CL:0000095!4.46e-07!17;CL:0000123!4.46e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000056;3.59e-12;4!CL:0000153;1.02e-09;9!CL:0000447;1.02e-09;9!CL:0000515;1.88e-09;3!CL:0000135;9.28e-09;3!CL:0000388;9.28e-09;3!CL:0000499;9.91e-09;28!CL:0002552;1.31e-08;5!CL:0002570;5.43e-08;8!CL:0002556;3.17e-07;6!CL:0002334;4.24e-07;12!CL:0000138;5.54e-07;6!CL:0000680;6.74e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,3.38e-12,4;CL:0000057,6.09e-12,76;CL:0000153,7.75e-10,9;CL:0000447,7.75e-10,9;CL:0000499,6.09e-09,28;CL:0000135,7.76e-09,3;CL:0000388,7.76e-09,3;CL:0002552,1.34e-08,5;CL:0002570,6.40e-08,8;CL:0002334,2.84e-07,12;CL:0002556,3.03e-07,6;CL:0000058,4.97e-07,6;CL:0000138,4.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000515;3.59e-12;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1115;5.59e-09;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,5.74e-09,20 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;9.28e-09;3!UBERON:0000043;9.28e-09;3!UBERON:0007845;9.28e-09;3!UBERON:0001758;3.17e-07;6!UBERON:0003672;3.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,7.76e-09,3;UBERON:0000043,7.76e-09,3;UBERON:0007845,7.76e-09,3;UBERON:0001758,3.03e-07,6;UBERON:0003672,3.03e-07,6 | |||
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|short_description=p@chr11:122027745..122027771,- | |short_description=p@chr11:122027745..122027771,- | ||
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Latest revision as of 19:17, 23 July 2015
Short description: | p@chr11:122027745..122027771, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:122027745..122027771, - |
Coexpression cluster: | C1615_Myoblast_prostate_giant_Preadipocyte_Smooth_liposarcoma_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 3.38e-12 | 4 |
fibroblast | 6.09e-12 | 76 |
GAG secreting cell | 7.75e-10 | 9 |
carbohydrate secreting cell | 7.75e-10 | 9 |
stromal cell | 6.09e-09 | 28 |
fibrocyte | 7.76e-09 | 3 |
tendon cell | 7.76e-09 | 3 |
fibroblast of gingiva | 1.34e-08 | 5 |
mesenchymal stem cell of adipose | 6.40e-08 | 8 |
preadipocyte | 2.84e-07 | 12 |
fibroblast of periodontium | 3.03e-07 | 6 |
chondroblast | 4.97e-07 | 6 |
chondrocyte | 4.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 7.76e-09 | 3 |
tendon | 7.76e-09 | 3 |
regular connective tissue | 7.76e-09 | 3 |
periodontium | 3.03e-07 | 6 |
dentition | 3.03e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 5.74e-09 | 20 |