FFCP PHASE1:Hg19::chr11:16404108..16404124,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55553 | |EntrezGene=55553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |HGNC=16421 | ||
|TSSclassifier=strong | |||
|UniProt=E9PN02 | |UniProt=E9PN02 | ||
|association_with_transcript=-164bp_to_ENST00000526673_5end | |association_with_transcript=-164bp_to_ENST00000526673_5end | ||
|cluster_id=chr11:16404108..16404124,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_26_at_SOX6_5end | |description=CAGE_peak_26_at_SOX6_5end | ||
|id=chr11:16404108..16404124,- | |id=chr11:16404108..16404124,- | ||
|ontology_enrichment_celltype=CL:0000764!2.35e-16!2;CL:0000765!2.35e-16!2;CL:0000050!2.35e-16!2;CL:0000038!2.35e-16!2;CL:0000558!2.35e-16!2;CL:0000547!2.35e-16!2;CL:0000549!2.35e-16!2;CL:0000550!2.35e-16!2;CL:0000552!2.35e-16!2 | |ontology_enrichment_celltype=CL:0000764!2.35e-16!2;CL:0000765!2.35e-16!2;CL:0000050!2.35e-16!2;CL:0000038!2.35e-16!2;CL:0000558!2.35e-16!2;CL:0000547!2.35e-16!2;CL:0000549!2.35e-16!2;CL:0000550!2.35e-16!2;CL:0000552!2.35e-16!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;8.98e-37;2!CL:0000558;8.98e-37;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.84e-37,2;CL:0000765,9.84e-37,2;CL:0000050,9.84e-37,2;CL:0000038,9.84e-37,2;CL:0000558,9.84e-37,2;CL:0000547,9.84e-37,2;CL:0000549,9.84e-37,2;CL:0000550,9.84e-37,2;CL:0000552,9.84e-37,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.97e-22!8 | |ontology_enrichment_disease=DOID:1036!1.97e-22!8 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.01e-32!15;UBERON:0000179!8.01e-32!15;UBERON:0000463!8.01e-32!15;UBERON:0000341!8.50e-16!2;UBERON:0002106!1.08e-10!3;UBERON:0004854!1.08e-10!3;UBERON:0009034!1.08e-10!3;UBERON:0002095!1.08e-10!3;UBERON:0004782!1.08e-10!3;UBERON:0003281!1.08e-10!3;UBERON:0009664!1.08e-10!3;UBERON:0002296!1.08e-10!3;UBERON:0005602!1.08e-10!3;UBERON:0001179!1.08e-10!3;UBERON:0006293!1.08e-10!3;UBERON:0007023!9.20e-09!115 | |ontology_enrichment_uberon=UBERON:0000178!8.01e-32!15;UBERON:0000179!8.01e-32!15;UBERON:0000463!8.01e-32!15;UBERON:0000341!8.50e-16!2;UBERON:0002106!1.08e-10!3;UBERON:0004854!1.08e-10!3;UBERON:0009034!1.08e-10!3;UBERON:0002095!1.08e-10!3;UBERON:0004782!1.08e-10!3;UBERON:0003281!1.08e-10!3;UBERON:0009664!1.08e-10!3;UBERON:0002296!1.08e-10!3;UBERON:0005602!1.08e-10!3;UBERON:0001179!1.08e-10!3;UBERON:0006293!1.08e-10!3;UBERON:0007023!9.20e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.05e-76;15!UBERON:0000179;4.05e-76;15!UBERON:0000463;4.05e-76;15!UBERON:0002390;1.35e-33;32!UBERON:0002193;2.55e-19;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.67e-76,15;UBERON:0000179,3.67e-76,15;UBERON:0000463,3.67e-76,15;UBERON:0007023,3.13e-15,114;UBERON:0002390,2.99e-11,98;UBERON:0003061,2.99e-11,98;UBERON:0004535,3.58e-10,109;UBERON:0002193,3.58e-10,108;UBERON:0001009,6.93e-10,112 | |||
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|short_description=p26@SOX6 | |short_description=p26@SOX6 | ||
}} | }} |
Latest revision as of 23:01, 16 September 2015
Short description: | p26@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_SOX6_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -164bp_to_ENST00000526673_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | E9PN02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.84e-37 | 2 |
erythroblast | 9.84e-37 | 2 |
megakaryocyte-erythroid progenitor cell | 9.84e-37 | 2 |
erythroid progenitor cell | 9.84e-37 | 2 |
reticulocyte | 9.84e-37 | 2 |
proerythroblast | 9.84e-37 | 2 |
basophilic erythroblast | 9.84e-37 | 2 |
polychromatophilic erythroblast | 9.84e-37 | 2 |
orthochromatic erythroblast | 9.84e-37 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.67e-76 | 15 |
haemolymphatic fluid | 3.67e-76 | 15 |
organism substance | 3.67e-76 | 15 |
adult organism | 3.13e-15 | 114 |
hematopoietic system | 2.99e-11 | 98 |
blood island | 2.99e-11 | 98 |
cardiovascular system | 3.58e-10 | 109 |
hemolymphoid system | 3.58e-10 | 108 |
circulatory system | 6.93e-10 | 112 |