FFCP PHASE1:Hg19::chr11:6256021..6256032,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1262 | |EntrezGene=1262 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2152 | |HGNC=2152 | ||
|TSSclassifier=strong | |||
|UniProt=B4DYQ8 | |UniProt=B4DYQ8 | ||
|association_with_transcript=26bp_to_ENST00000533426,uc010raa.1_5end | |association_with_transcript=26bp_to_ENST00000533426,uc010raa.1_5end | ||
|cluster_id=chr11:6256021..6256032,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_2_at_CNGA4_5end | |description=CAGE_peak_2_at_CNGA4_5end | ||
|id=chr11:6256021..6256032,+ | |id=chr11:6256021..6256032,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10!UBERON:0006215;1.03e-17;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.88e-42!57;UBERON:0005068!2.88e-42!57;UBERON:0006241!2.88e-42!57;UBERON:0007135!2.88e-42!57;UBERON:0002616!2.73e-36!59;UBERON:0000955!8.64e-34!69;UBERON:0006238!8.64e-34!69;UBERON:0001950!1.33e-33!20;UBERON:0005743!5.01e-33!86;UBERON:0002780!1.12e-31!41;UBERON:0001890!1.12e-31!41;UBERON:0006240!1.12e-31!41;UBERON:0001017!2.33e-31!82;UBERON:0003080!6.99e-31!42;UBERON:0002619!1.52e-30!22;UBERON:0003075!3.81e-30!86;UBERON:0007284!3.81e-30!86;UBERON:0001869!6.44e-30!32;UBERON:0000073!1.29e-29!94;UBERON:0001016!1.29e-29!94;UBERON:0002346!1.16e-28!90;UBERON:0002020!3.73e-28!34;UBERON:0003528!3.73e-28!34;UBERON:0001893!4.34e-28!34;UBERON:0000956!7.73e-27!25;UBERON:0000203!7.73e-27!25;UBERON:0007023!1.98e-24!115;UBERON:0002791!2.44e-24!33;UBERON:0003056!8.19e-24!61;UBERON:0000033!8.22e-20!123;UBERON:0000200!1.49e-19!6;UBERON:0000153!9.77e-19!129;UBERON:0007811!9.77e-19!129;UBERON:0001871!4.00e-15!7;UBERON:0004121!4.75e-15!169;UBERON:0000924!1.28e-14!173;UBERON:0006601!1.28e-14!173;UBERON:0001872!9.29e-14!5;UBERON:0003076!3.09e-12!15;UBERON:0003057!3.09e-12!15;UBERON:0000025!1.94e-11!194;UBERON:0002771!8.90e-11!3;UBERON:0001896!1.60e-10!3;UBERON:0005290!1.60e-10!3;UBERON:0010096!1.60e-10!3;UBERON:0004733!4.89e-10!12;UBERON:0002028!4.89e-10!12;UBERON:0007277!4.89e-10!12;UBERON:0004732!2.82e-09!13;UBERON:0002902!6.16e-09!1;UBERON:0009899!6.16e-09!1;UBERON:0002022!7.75e-09!1;UBERON:0001301!8.36e-09!1;UBERON:0002298!1.06e-08!8;UBERON:0007190!1.65e-08!1;UBERON:0004111!1.72e-08!241;UBERON:0002581!1.78e-08!1;UBERON:0001882!1.91e-08!1;UBERON:0005403!1.91e-08!1;UBERON:0002021!5.73e-07!5;UBERON:0003135!7.65e-07!11 | |ontology_enrichment_uberon=UBERON:0001049!2.88e-42!57;UBERON:0005068!2.88e-42!57;UBERON:0006241!2.88e-42!57;UBERON:0007135!2.88e-42!57;UBERON:0002616!2.73e-36!59;UBERON:0000955!8.64e-34!69;UBERON:0006238!8.64e-34!69;UBERON:0001950!1.33e-33!20;UBERON:0005743!5.01e-33!86;UBERON:0002780!1.12e-31!41;UBERON:0001890!1.12e-31!41;UBERON:0006240!1.12e-31!41;UBERON:0001017!2.33e-31!82;UBERON:0003080!6.99e-31!42;UBERON:0002619!1.52e-30!22;UBERON:0003075!3.81e-30!86;UBERON:0007284!3.81e-30!86;UBERON:0001869!6.44e-30!32;UBERON:0000073!1.29e-29!94;UBERON:0001016!1.29e-29!94;UBERON:0002346!1.16e-28!90;UBERON:0002020!3.73e-28!34;UBERON:0003528!3.73e-28!34;UBERON:0001893!4.34e-28!34;UBERON:0000956!7.73e-27!25;UBERON:0000203!7.73e-27!25;UBERON:0007023!1.98e-24!115;UBERON:0002791!2.44e-24!33;UBERON:0003056!8.19e-24!61;UBERON:0000033!8.22e-20!123;UBERON:0000200!1.49e-19!6;UBERON:0000153!9.77e-19!129;UBERON:0007811!9.77e-19!129;UBERON:0001871!4.00e-15!7;UBERON:0004121!4.75e-15!169;UBERON:0000924!1.28e-14!173;UBERON:0006601!1.28e-14!173;UBERON:0001872!9.29e-14!5;UBERON:0003076!3.09e-12!15;UBERON:0003057!3.09e-12!15;UBERON:0000025!1.94e-11!194;UBERON:0002771!8.90e-11!3;UBERON:0001896!1.60e-10!3;UBERON:0005290!1.60e-10!3;UBERON:0010096!1.60e-10!3;UBERON:0004733!4.89e-10!12;UBERON:0002028!4.89e-10!12;UBERON:0007277!4.89e-10!12;UBERON:0004732!2.82e-09!13;UBERON:0002902!6.16e-09!1;UBERON:0009899!6.16e-09!1;UBERON:0002022!7.75e-09!1;UBERON:0001301!8.36e-09!1;UBERON:0002298!1.06e-08!8;UBERON:0007190!1.65e-08!1;UBERON:0004111!1.72e-08!241;UBERON:0002581!1.78e-08!1;UBERON:0001882!1.91e-08!1;UBERON:0005403!1.91e-08!1;UBERON:0002021!5.73e-07!5;UBERON:0003135!7.65e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0002037;1.50e-09;6!UBERON:0002680;8.61e-07;9!UBERON:0001895;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0002037,1.44e-09,6;UBERON:0006215,1.44e-09,6;UBERON:0002680,8.37e-07,9;UBERON:0001895,8.37e-07,9;UBERON:0010092,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,2.65225443763838,2.41167717140561,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,2.65225443763838,2.41167717140561,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@CNGA4 | |short_description=p2@CNGA4 | ||
}} | }} |
Latest revision as of 21:34, 18 September 2015
Short description: | p2@CNGA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNGA4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 26bp_to_ENST00000533426, uc010raa.1_5end |
EntrezGene: | CNGA4 |
HGNC: | 2152 |
UniProt: | B4DYQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
cerebellum | 1.44e-09 | 6 |
rhombic lip | 1.44e-09 | 6 |
regional part of metencephalon | 8.37e-07 | 9 |
metencephalon | 8.37e-07 | 9 |
future metencephalon | 8.37e-07 | 9 |