FFCP PHASE1:Hg19::chr11:74870818..74870844,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11309 | |EntrezGene=11309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10962 | |HGNC=10962 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERN5,C7BWB6,E9PIU9,B4DGA9,O94956 | |UniProt=E7ERN5,C7BWB6,E9PIU9,B4DGA9,O94956 | ||
|association_with_transcript=0bp_to_ENST00000428359,ENST00000525845,ENST00000534186,NM_001145211,uc001owd.2_5end | |association_with_transcript=0bp_to_ENST00000428359,ENST00000525845,ENST00000534186,NM_001145211,uc001owd.2_5end | ||
|cluster_id=chr11:74870818..74870844,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_8_at_SLCO2B1_5end | |description=CAGE_peak_8_at_SLCO2B1_5end | ||
|id=chr11:74870818..74870844,+ | |id=chr11:74870818..74870844,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.32e-20!12;CL:0000417!2.32e-20!12;CL:0000668!2.32e-20!12;CL:0000414!2.32e-20!12;CL:0000412!2.32e-20!12;CL:0000182!2.32e-20!12;CL:0000223!3.67e-10!59;CL:0002178!1.53e-07!3 | |ontology_enrichment_celltype=CL:0000181!2.32e-20!12;CL:0000417!2.32e-20!12;CL:0000668!2.32e-20!12;CL:0000414!2.32e-20!12;CL:0000412!2.32e-20!12;CL:0000182!2.32e-20!12;CL:0000223!3.67e-10!59;CL:0002178!1.53e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.51e-16;12!CL:0002563;1.16e-12;4!CL:0002253;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.59e-16,12;CL:0002563,1.16e-12,4;CL:0000223,2.36e-09,58;CL:0002253,4.17e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.57e-18;31!UBERON:0003124;5.07e-13;1!UBERON:0004161;3.34e-10;11!UBERON:0009497;1.03e-08;13 | |||
|ontology_enrichment_disease=DOID:3493!6.13e-11!2 | |ontology_enrichment_disease=DOID:3493!6.13e-11!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.68e-21!19;UBERON:0006925!8.68e-21!19;UBERON:0008836!8.68e-21!19;UBERON:0009497!5.96e-19!25;UBERON:0000015!5.96e-19!25;UBERON:0002423!5.96e-19!25;UBERON:0006235!5.96e-19!25;UBERON:0004161!5.96e-19!25;UBERON:0005057!4.73e-18!26;UBERON:0008835!9.79e-18!22;UBERON:0003894!9.79e-18!22;UBERON:0009854!6.79e-17!23;UBERON:0007499!2.05e-15!25;UBERON:0005172!3.01e-15!55;UBERON:0005173!3.01e-15!55;UBERON:0005409!8.46e-15!35;UBERON:0009856!9.24e-15!26;UBERON:0004921!4.63e-14!129;UBERON:0004185!4.63e-14!129;UBERON:0003929!1.43e-13!54;UBERON:0002417!1.88e-13!61;UBERON:0000916!1.88e-13!61;UBERON:0001007!3.88e-12!155;UBERON:0001555!3.88e-12!155;UBERON:0007026!3.88e-12!155;UBERON:0002365!4.01e-12!31;UBERON:0002330!4.01e-12!31;UBERON:0004119!5.99e-12!169;UBERON:0000925!5.99e-12!169;UBERON:0006595!5.99e-12!169;UBERON:0000059!1.96e-11!11;UBERON:0002368!1.48e-10!35;UBERON:0000160!1.71e-10!27;UBERON:0005911!2.22e-09!82;UBERON:0001155!3.25e-09!9;UBERON:0000077!9.55e-09!130;UBERON:0000949!7.29e-08!45;UBERON:0005177!1.70e-07!107;UBERON:0003135!2.89e-07!11;UBERON:0002530!5.03e-07!59;UBERON:0009569!6.17e-07!113;UBERON:0000466!8.67e-07!126 | |ontology_enrichment_uberon=UBERON:0002107!8.68e-21!19;UBERON:0006925!8.68e-21!19;UBERON:0008836!8.68e-21!19;UBERON:0009497!5.96e-19!25;UBERON:0000015!5.96e-19!25;UBERON:0002423!5.96e-19!25;UBERON:0006235!5.96e-19!25;UBERON:0004161!5.96e-19!25;UBERON:0005057!4.73e-18!26;UBERON:0008835!9.79e-18!22;UBERON:0003894!9.79e-18!22;UBERON:0009854!6.79e-17!23;UBERON:0007499!2.05e-15!25;UBERON:0005172!3.01e-15!55;UBERON:0005173!3.01e-15!55;UBERON:0005409!8.46e-15!35;UBERON:0009856!9.24e-15!26;UBERON:0004921!4.63e-14!129;UBERON:0004185!4.63e-14!129;UBERON:0003929!1.43e-13!54;UBERON:0002417!1.88e-13!61;UBERON:0000916!1.88e-13!61;UBERON:0001007!3.88e-12!155;UBERON:0001555!3.88e-12!155;UBERON:0007026!3.88e-12!155;UBERON:0002365!4.01e-12!31;UBERON:0002330!4.01e-12!31;UBERON:0004119!5.99e-12!169;UBERON:0000925!5.99e-12!169;UBERON:0006595!5.99e-12!169;UBERON:0000059!1.96e-11!11;UBERON:0002368!1.48e-10!35;UBERON:0000160!1.71e-10!27;UBERON:0005911!2.22e-09!82;UBERON:0001155!3.25e-09!9;UBERON:0000077!9.55e-09!130;UBERON:0000949!7.29e-08!45;UBERON:0005177!1.70e-07!107;UBERON:0003135!2.89e-07!11;UBERON:0002530!5.03e-07!59;UBERON:0009569!6.17e-07!113;UBERON:0000466!8.67e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.02e-22;19!UBERON:0006925;4.02e-22;19!UBERON:0002423;9.53e-17;25!UBERON:0002365;1.69e-13;31!UBERON:0002330;1.69e-13;31!UBERON:0001242;1.16e-12;4!UBERON:0001262;1.16e-12;4!UBERON:0004786;1.16e-12;4!UBERON:0004808;1.16e-12;4!UBERON:0001277;1.16e-12;4!UBERON:0001052;1.61e-12;4!UBERON:0002368;1.09e-11;33!UBERON:0000160;1.51e-10;17!UBERON:0005172;3.22e-10;52!UBERON:0005173;3.22e-10;52!UBERON:0004907;3.34e-10;5!UBERON:0000059;5.26e-10;11!UBERON:0001007;2.27e-08;81!UBERON:0005409;2.67e-08;22!UBERON:0000949;2.88e-08;43!UBERON:0000485;1.29e-07;7!UBERON:0003929;1.29e-07;7!UBERON:0002417;1.36e-07;58!UBERON:0000916;1.36e-07;58!UBERON:0003350;9.11e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.09e-22,19;UBERON:0006925,4.09e-22,19;UBERON:0008836,4.09e-22,19;UBERON:0008835,4.61e-19,22;UBERON:0003894,4.61e-19,22;UBERON:0009854,3.19e-18,23;UBERON:0007499,9.67e-17,25;UBERON:0009497,9.67e-17,25;UBERON:0000015,9.67e-17,25;UBERON:0002423,9.67e-17,25;UBERON:0006235,9.67e-17,25;UBERON:0004161,9.67e-17,25;UBERON:0003929,1.21e-16,54;UBERON:0009856,4.37e-16,26;UBERON:0002365,1.94e-13,31;UBERON:0002330,1.94e-13,31;UBERON:0005172,4.29e-13,54;UBERON:0005173,4.29e-13,54;UBERON:0001242,1.16e-12,4;UBERON:0001262,1.16e-12,4;UBERON:0004786,1.16e-12,4;UBERON:0004808,1.16e-12,4;UBERON:0001277,1.16e-12,4;UBERON:0001052,1.65e-12,4;UBERON:0002368,7.28e-12,35;UBERON:0002417,1.06e-11,60;UBERON:0000916,1.06e-11,60;UBERON:0005911,1.35e-10,82;UBERON:0000160,1.53e-10,17;UBERON:0004921,1.73e-10,118;UBERON:0004907,3.42e-10,5;UBERON:0000059,5.34e-10,11;UBERON:0002530,3.09e-09,59;UBERON:0000949,3.81e-09,45;UBERON:0004119,7.01e-09,160;UBERON:0000925,7.01e-09,160;UBERON:0006595,7.01e-09,160;UBERON:0001007,2.86e-08,145;UBERON:0001555,2.86e-08,145;UBERON:0007026,2.86e-08,145;UBERON:0003104,2.12e-07,160;UBERON:0009142,2.12e-07,160;UBERON:0005409,2.32e-07,25;UBERON:0003350,9.11e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6975897841505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.4914097501126,10.8110993834539,17.7236972004421,0,9.47010976781974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0313343161046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9409466889197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.650851112633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80600442875399,0,0.995261931078505,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.315132729228895,0.247247575143499,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,2.99461687736953,1.36381929150995,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3276707905617,7.95041333473328,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9430588008968,0,0,0,0.0657727735628491,0,0,0,0,2.24217730651031,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0.874238242015829,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6975897841505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.4914097501126,10.8110993834539,17.7236972004421,0,9.47010976781974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0313343161046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9409466889197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.650851112633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80600442875399,0,0.995261931078505,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.315132729228895,0.247247575143499,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,2.99461687736953,1.36381929150995,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3276707905617,7.95041333473328,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9430588008968,0,0,0,0.0657727735628491,0,0,0,0,2.24217730651031,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0.874238242015829,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@SLCO2B1 | |short_description=p8@SLCO2B1 | ||
}} | }} |
Latest revision as of 05:37, 20 September 2015
Short description: | p8@SLCO2B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLCO2B1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000428359, ENST00000525845, ENST00000534186, NM_001145211, uc001owd.2_5end |
EntrezGene: | SLCO2B1 |
HGNC: | 10962 |
UniProt: | E7ERN5C7BWB6E9PIU9B4DGA9O94956 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.59e-16 | 12 |
intestinal epithelial cell | 1.16e-12 | 4 |
endodermal cell | 2.36e-09 | 58 |
epithelial cell of large intestine | 4.17e-07 | 2 |