FFCP PHASE1:Hg19::chr12:28125967..28125978,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5744 | |EntrezGene=5744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9607 | |HGNC=9607 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-329bp_to_ENST00000545234_5end | |association_with_transcript=-329bp_to_ENST00000545234_5end | ||
|cluster_id=chr12:28125967..28125978,- | |||
|coexpression_cluster_id=C1109 | |coexpression_cluster_id=C1109 | ||
|description=CAGE_peak_16_at_PTHLH_5end | |description=CAGE_peak_16_at_PTHLH_5end | ||
|id=chr12:28125967..28125978,- | |id=chr12:28125967..28125978,- | ||
|ontology_enrichment_celltype=CL:0002368!3.29e-32!13;CL:0002159!2.64e-25!13;CL:0002076!7.77e-25!43;CL:0000244!3.50e-23!4;CL:0000731!3.50e-23!4;CL:0000223!1.19e-19!59;CL:0002328!4.44e-17!3;CL:0000066!1.54e-16!254;CL:0002202!5.05e-15!9;CL:0002632!5.05e-15!9;CL:0000317!4.43e-12!2;CL:1000448!4.43e-12!2;CL:0002308!4.43e-12!2;CL:0002140!4.43e-12!2;CL:0000575!1.90e-11!2;CL:0000362!5.02e-11!8;CL:0002077!3.15e-09!33;CL:0000220!6.29e-09!246;CL:0002321!8.20e-09!248;CL:0000240!1.12e-08!6;CL:0000311!1.12e-08!6;CL:0000079!1.12e-08!6;CL:0000237!1.12e-08!6;CL:0000036!1.12e-08!6;CL:0000357!1.12e-08!6;CL:0000114!1.12e-08!6;CL:0002166!2.67e-08!3;CL:0000068!3.31e-08!3;CL:0000069!3.31e-08!3;CL:0000307!3.31e-08!3;CL:0000377!3.31e-08!3;CL:0002231!6.49e-08!3;CL:0002336!5.43e-07!1;CL:0002261!5.43e-07!1;CL:0002170!5.43e-07!1;CL:0000076!9.59e-07!62;CL:0000221!9.88e-07!71 | |ontology_enrichment_celltype=CL:0002368!3.29e-32!13;CL:0002159!2.64e-25!13;CL:0002076!7.77e-25!43;CL:0000244!3.50e-23!4;CL:0000731!3.50e-23!4;CL:0000223!1.19e-19!59;CL:0002328!4.44e-17!3;CL:0000066!1.54e-16!254;CL:0002202!5.05e-15!9;CL:0002632!5.05e-15!9;CL:0000317!4.43e-12!2;CL:1000448!4.43e-12!2;CL:0002308!4.43e-12!2;CL:0002140!4.43e-12!2;CL:0000575!1.90e-11!2;CL:0000362!5.02e-11!8;CL:0002077!3.15e-09!33;CL:0000220!6.29e-09!246;CL:0002321!8.20e-09!248;CL:0000240!1.12e-08!6;CL:0000311!1.12e-08!6;CL:0000079!1.12e-08!6;CL:0000237!1.12e-08!6;CL:0000036!1.12e-08!6;CL:0000357!1.12e-08!6;CL:0000114!1.12e-08!6;CL:0002166!2.67e-08!3;CL:0000068!3.31e-08!3;CL:0000069!3.31e-08!3;CL:0000307!3.31e-08!3;CL:0000377!3.31e-08!3;CL:0002231!6.49e-08!3;CL:0002336!5.43e-07!1;CL:0002261!5.43e-07!1;CL:0002170!5.43e-07!1;CL:0000076!9.59e-07!62;CL:0000221!9.88e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000244;9.45e-80;4!CL:0000731;9.45e-80;4!CL:0002336;5.16e-21;1!CL:0002261;5.16e-21;1!CL:0002170;5.16e-21;1!CL:0000317;3.34e-11;2!CL:1000448;3.34e-11;2!CL:0002308;3.34e-11;2!CL:0002140;3.34e-11;2!CL:0002076;2.06e-08;42!CL:0002328;6.78e-08;3!CL:0002166;6.78e-08;3!CL:0002621;6.78e-08;3!CL:0002368;5.11e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,6.32e-80,4;CL:0000731,6.32e-80,4;CL:0002336,4.22e-21,1;CL:0002261,4.22e-21,1;CL:0002170,4.22e-21,1;CL:0000317,2.47e-11,2;CL:1000448,2.47e-11,2;CL:0002308,2.47e-11,2;CL:0002140,2.47e-11,2;CL:0002621,6.78e-08,3;CL:0002166,7.26e-08,3;CL:0002076,7.64e-08,42;CL:0002328,8.29e-08,3;CL:0000066,2.35e-07,253;CL:0002368,5.94e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!7.89e-28!5;UBERON:0005910!3.66e-23!6;UBERON:0004815!4.44e-17!3;UBERON:0002031!4.44e-17!3;UBERON:0002185!6.12e-13!4;UBERON:0002419!4.43e-12!2;UBERON:0007771!4.43e-12!2;UBERON:0003297!4.43e-12!2;UBERON:0001821!4.43e-12!2;UBERON:0003487!4.43e-12!2;UBERON:0001820!4.43e-12!2;UBERON:0005089!4.43e-12!2;UBERON:0005088!4.43e-12!2;UBERON:0004119!1.79e-10!169;UBERON:0000925!1.79e-10!169;UBERON:0006595!1.79e-10!169;UBERON:0007196!1.45e-09!14;UBERON:0001558!1.45e-09!14;UBERON:0001003!1.94e-09!14;UBERON:0007376!1.94e-09!14;UBERON:0007383!1.94e-09!14;UBERON:0005911!1.84e-08!82;UBERON:0001004!2.35e-08!72;UBERON:0000065!2.39e-08!53;UBERON:0005178!6.77e-07!34;UBERON:0002224!6.77e-07!34;UBERON:0003102!8.50e-07!95 | |ontology_enrichment_uberon=UBERON:0000365!7.89e-28!5;UBERON:0005910!3.66e-23!6;UBERON:0004815!4.44e-17!3;UBERON:0002031!4.44e-17!3;UBERON:0002185!6.12e-13!4;UBERON:0002419!4.43e-12!2;UBERON:0007771!4.43e-12!2;UBERON:0003297!4.43e-12!2;UBERON:0001821!4.43e-12!2;UBERON:0003487!4.43e-12!2;UBERON:0001820!4.43e-12!2;UBERON:0005089!4.43e-12!2;UBERON:0005088!4.43e-12!2;UBERON:0004119!1.79e-10!169;UBERON:0000925!1.79e-10!169;UBERON:0006595!1.79e-10!169;UBERON:0007196!1.45e-09!14;UBERON:0001558!1.45e-09!14;UBERON:0001003!1.94e-09!14;UBERON:0007376!1.94e-09!14;UBERON:0007383!1.94e-09!14;UBERON:0005911!1.84e-08!82;UBERON:0001004!2.35e-08!72;UBERON:0000065!2.39e-08!53;UBERON:0005178!6.77e-07!34;UBERON:0002224!6.77e-07!34;UBERON:0003102!8.50e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.95e-64;5!UBERON:0005910;2.06e-53;6!UBERON:0000486;1.69e-41;12!UBERON:0005911;2.17e-15;36!UBERON:0002419;3.34e-11;2!UBERON:0007771;3.34e-11;2!UBERON:0003297;3.34e-11;2!UBERON:0001821;3.34e-11;2!UBERON:0003487;3.34e-11;2!UBERON:0001820;3.34e-11;2!UBERON:0006554;4.58e-11;30!UBERON:0001008;4.58e-11;30!UBERON:0004815;6.78e-08;3!UBERON:0002031;6.78e-08;3!UBERON:0001949;6.78e-08;3!UBERON:0003729;5.11e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.32e-64,5;UBERON:0005910,1.58e-53,6;UBERON:0002419,2.47e-11,2;UBERON:0007771,2.47e-11,2;UBERON:0003297,2.47e-11,2;UBERON:0001821,2.47e-11,2;UBERON:0003487,2.47e-11,2;UBERON:0001820,2.47e-11,2;UBERON:0005089,2.47e-11,2;UBERON:0005088,2.47e-11,2;UBERON:0005911,1.15e-08,82;UBERON:0001949,6.78e-08,3;UBERON:0004815,8.29e-08,3;UBERON:0002031,8.29e-08,3;UBERON:0004119,1.62e-07,160;UBERON:0000925,1.62e-07,160;UBERON:0006595,1.62e-07,160;UBERON:0006554,3.45e-07,47;UBERON:0001008,4.81e-07,48;UBERON:0003729,4.95e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.201057944823262,1.574003567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34385702559088,0.708875486211932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.768760269460425,1.27612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0.670302275535787,0,0,4.3050537267123,1.68471475667626,2.66058092122005,6.43225520579487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.201057944823262,1.574003567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34385702559088,0.708875486211932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.768760269460425,1.27612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0.670302275535787,0,0,4.3050537267123,1.68471475667626,2.66058092122005,6.43225520579487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@PTHLH | |short_description=p16@PTHLH | ||
}} | }} |
Latest revision as of 00:48, 18 September 2015
Short description: | p16@PTHLH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PTHLH_5end |
Coexpression cluster: | C1109_Urothelial_Small_Gingival_Mallassezderived_Prostate_Sebocyte_Bronchial |
Association with transcript: | -329bp_to_ENST00000545234_5end |
EntrezGene: | PTHLH |
HGNC: | 9607 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 6.32e-80 | 4 |
urothelial cell | 6.32e-80 | 4 |
buccal mucosa cell | 4.22e-21 | 1 |
endothelial cell of viscerocranial mucosa | 4.22e-21 | 1 |
keratinized cell of the oral mucosa | 4.22e-21 | 1 |
sebum secreting cell | 2.47e-11 | 2 |
epithelial cell of sweat gland | 2.47e-11 | 2 |
epithelial cell of skin gland | 2.47e-11 | 2 |
acinar cell of sebaceous gland | 2.47e-11 | 2 |
gingival epithelial cell | 6.78e-08 | 3 |
epithelial cell of Malassez | 7.26e-08 | 3 |
endo-epithelial cell | 7.64e-08 | 42 |
bronchial epithelial cell | 8.29e-08 | 3 |
epithelial cell | 2.35e-07 | 253 |
respiratory epithelial cell | 5.94e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
urothelium | 4.32e-64 | 5 |
transitional epithelium | 1.58e-53 | 6 |
skin gland | 2.47e-11 | 2 |
epidermis gland | 2.47e-11 | 2 |
gland of integumental system | 2.47e-11 | 2 |
sebaceous gland | 2.47e-11 | 2 |
skin sebaceous gland | 2.47e-11 | 2 |
sweat gland | 2.47e-11 | 2 |
sweat gland placode | 2.47e-11 | 2 |
sebaceous gland placode | 2.47e-11 | 2 |
endo-epithelium | 1.15e-08 | 82 |
gingival epithelium | 6.78e-08 | 3 |
lower respiratory tract epithelium | 8.29e-08 | 3 |
epithelium of bronchus | 8.29e-08 | 3 |
endoderm-derived structure | 1.62e-07 | 160 |
endoderm | 1.62e-07 | 160 |
presumptive endoderm | 1.62e-07 | 160 |
urinary system structure | 3.45e-07 | 47 |
renal system | 4.81e-07 | 48 |
mouth mucosa | 4.95e-07 | 13 |