FFCP PHASE1:Hg19::chr12:57630458..57630470,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57630458..57630470,- | |||
|coexpression_cluster_id=C243 | |coexpression_cluster_id=C243 | ||
|description=CAGE_peak_at_chr12:57630458..57630470,- | |description=CAGE_peak_at_chr12:57630458..57630470,- | ||
|id=chr12:57630458..57630470,- | |id=chr12:57630458..57630470,- | ||
|ontology_enrichment_celltype=CL:0000153!2.76e-11!9;CL:0000447!2.76e-11!9;CL:0000667!2.28e-07!6;CL:0000058!2.28e-07!6;CL:0000138!2.28e-07!6 | |ontology_enrichment_celltype=CL:0000153!2.76e-11!9;CL:0000447!2.76e-11!9;CL:0000667!2.28e-07!6;CL:0000058!2.28e-07!6;CL:0000138!2.28e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000138;1.24e-20;6!CL:0002581;6.21e-15;1!CL:0000153;5.64e-14;9!CL:0000447;5.64e-14;9!CL:0000327;1.30e-08;15!CL:0002195;6.35e-08;2!CL:0002571;6.35e-08;2!CL:0002596;6.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.28e-21,6;CL:0000138,7.28e-21,6;CL:0002581,6.22e-15,1;CL:0000153,3.96e-14,9;CL:0000447,3.96e-14,9;CL:0000327,1.05e-08,15;CL:0002596,5.02e-08,2;CL:0002195,8.04e-08,2;CL:0002571,8.04e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.06e-20!115;UBERON:0002616!3.68e-09!59;UBERON:0001049!5.73e-08!57;UBERON:0005068!5.73e-08!57;UBERON:0006241!5.73e-08!57;UBERON:0007135!5.73e-08!57;UBERON:0001017!6.57e-08!82;UBERON:0005743!7.33e-08!86;UBERON:0003075!1.81e-07!86;UBERON:0007284!1.81e-07!86;UBERON:0000955!1.95e-07!69;UBERON:0006238!1.95e-07!69;UBERON:0002020!2.52e-07!34;UBERON:0003528!2.52e-07!34;UBERON:0002780!3.51e-07!41;UBERON:0001890!3.51e-07!41;UBERON:0006240!3.51e-07!41;UBERON:0000073!4.90e-07!94;UBERON:0001016!4.90e-07!94;UBERON:0003080!6.62e-07!42;UBERON:0002346!8.35e-07!90;UBERON:0002308!9.11e-07!9;UBERON:0000125!9.11e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!3.06e-20!115;UBERON:0002616!3.68e-09!59;UBERON:0001049!5.73e-08!57;UBERON:0005068!5.73e-08!57;UBERON:0006241!5.73e-08!57;UBERON:0007135!5.73e-08!57;UBERON:0001017!6.57e-08!82;UBERON:0005743!7.33e-08!86;UBERON:0003075!1.81e-07!86;UBERON:0007284!1.81e-07!86;UBERON:0000955!1.95e-07!69;UBERON:0006238!1.95e-07!69;UBERON:0002020!2.52e-07!34;UBERON:0003528!2.52e-07!34;UBERON:0002780!3.51e-07!41;UBERON:0001890!3.51e-07!41;UBERON:0006240!3.51e-07!41;UBERON:0000073!4.90e-07!94;UBERON:0001016!4.90e-07!94;UBERON:0003080!6.62e-07!42;UBERON:0002346!8.35e-07!90;UBERON:0002308!9.11e-07!9;UBERON:0000125!9.11e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.50e-14;1!UBERON:0005406;4.08e-08;2!UBERON:0005396;6.35e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,4.09e-08,2;UBERON:0005396,5.02e-08,2 | |||
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| ||
|short_description=p@chr12:57630458..57630470,- | |short_description=p@chr12:57630458..57630470,- | ||
}} | }} |
Latest revision as of 10:41, 24 July 2015
Short description: | p@chr12:57630458..57630470, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57630458..57630470, - |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.28e-21 | 6 |
chondrocyte | 7.28e-21 | 6 |
perirenal preadipocyte | 6.22e-15 | 1 |
GAG secreting cell | 3.96e-14 | 9 |
carbohydrate secreting cell | 3.96e-14 | 9 |
extracellular matrix secreting cell | 1.05e-08 | 15 |
smooth muscle cell of the carotid artery | 5.02e-08 | 2 |
hepatic stem cell | 8.04e-08 | 2 |
hepatic mesenchymal stem cell | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 4.09e-08 | 2 |
carotid artery segment | 5.02e-08 | 2 |