FFCP PHASE1:Hg19::chr18:10890571..10890584,-: Difference between revisions
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|id=chr18:10890571..10890584,-
|short_description=p1@PIEZO2
|description=CAGE_peak_1_at_PIEZO2_5end
|association_with_transcript=105bp_to_uc002kow.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63895 | |EntrezGene=63895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26270 | |HGNC=26270 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=105bp_to_uc002kow.1_5end | |||
|cluster_id=chr18:10890571..10890584,- | |||
|coexpression_cluster_id=C631 | |||
|description=CAGE_peak_1_at_PIEZO2_5end | |||
|id=chr18:10890571..10890584,- | |||
|ontology_enrichment_celltype=CL:0000945!6.68e-27!24;CL:0000826!6.68e-27!24;CL:0000946!4.73e-15!1;CL:0000786!4.73e-15!1;CL:0000980!4.73e-15!1;CL:0000342!1.41e-14!1;CL:0002565!1.41e-14!1;CL:0000838!3.73e-12!52;CL:0000542!6.48e-12!53;CL:0000051!6.48e-12!53;CL:0000785!3.56e-08!2;CL:0000955!3.56e-08!2;CL:0000818!3.56e-08!2;CL:0000954!3.56e-08!2;CL:0000816!3.56e-08!2;CL:0002549!6.58e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.86e-42;24!CL:0000946;7.48e-30;1!CL:0000786;7.48e-30;1!CL:0000542;5.52e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.73e-42,24;CL:0000826,1.73e-42,24;CL:0000946,7.48e-30,1;CL:0000786,7.48e-30,1;CL:0000980,7.48e-30,1;CL:0000838,7.57e-20,52;CL:0000542,1.77e-19,53;CL:0000051,1.77e-19,53;CL:0000785,1.15e-15,2;CL:0000955,1.15e-15,2;CL:0000818,1.15e-15,2;CL:0000954,1.15e-15,2;CL:0000816,1.15e-15,2;CL:0000817,6.73e-11,3;CL:0002087,4.92e-09,115;CL:0002031,1.15e-08,120;CL:0000738,1.14e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;1.15e-15;2!CL:0000051;5.52e-09;53 | |||
|ontology_enrichment_disease=DOID:630!6.22e-15!1;DOID:0050177!6.22e-15!1;DOID:0050427!6.22e-15!1 | |||
|ontology_enrichment_disease_v019=DOID:630;1.33e-29;1!DOID:0050177;1.33e-29;1!DOID:0050427;1.33e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.33e-29,1;DOID:0050177,1.33e-29,1;DOID:0050427,1.33e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0002506!1.41e-14!1;UBERON:0001769!1.41e-14!1;UBERON:0001882!3.15e-14!1;UBERON:0005403!3.15e-14!1;UBERON:0000488!4.70e-14!4;UBERON:0002200!2.43e-11!11;UBERON:0006876!2.43e-11!11;UBERON:0007625!2.61e-11!11;UBERON:0002203!1.10e-09!6;UBERON:0001768!1.10e-09!6;UBERON:0001801!5.23e-09!14;UBERON:0003947!6.58e-08!2;UBERON:0005629!6.58e-08!2;UBERON:0005358!6.58e-08!2;UBERON:0001886!6.58e-08!2;UBERON:0004086!6.58e-08!2;UBERON:0005282!6.58e-08!2;UBERON:0005281!6.58e-08!2;UBERON:0000019!8.98e-07!19;UBERON:0000047!8.98e-07!19;UBERON:0004088!8.98e-07!19;UBERON:0003072!8.98e-07!19;UBERON:0003071!8.98e-07!19;UBERON:0004128!8.98e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.09e-10;3!UBERON:0004177;6.39e-07;5!UBERON:0005057;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.20e-10,3;UBERON:0004854,1.20e-10,3;UBERON:0009034,1.20e-10,3;UBERON:0002095,1.20e-10,3;UBERON:0004782,1.20e-10,3;UBERON:0003281,1.20e-10,3;UBERON:0009664,1.20e-10,3;UBERON:0002296,1.20e-10,3;UBERON:0005602,1.20e-10,3;UBERON:0001179,1.20e-10,3;UBERON:0006293,1.20e-10,3 | |||
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|short_description=p1@PIEZO2 | |||
}} | }} |
Latest revision as of 18:22, 18 September 2015
Short description: | p1@PIEZO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PIEZO2_5end |
Coexpression cluster: | C631_b_plasma_xeroderma_lymphoma_splenic_Burkitt_B |
Association with transcript: | 105bp_to_uc002kow.1_5end |
EntrezGene: | PIEZO2 |
HGNC: | 26270 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.73e-42 | 24 |
pro-B cell | 1.73e-42 | 24 |
antibody secreting cell | 7.48e-30 | 1 |
plasma cell | 7.48e-30 | 1 |
plasmablast | 7.48e-30 | 1 |
lymphoid lineage restricted progenitor cell | 7.57e-20 | 52 |
lymphocyte | 1.77e-19 | 53 |
common lymphoid progenitor | 1.77e-19 | 53 |
mature B cell | 1.15e-15 | 2 |
pre-B-II cell | 1.15e-15 | 2 |
transitional stage B cell | 1.15e-15 | 2 |
small pre-B-II cell | 1.15e-15 | 2 |
immature B cell | 1.15e-15 | 2 |
precursor B cell | 6.73e-11 | 3 |
nongranular leukocyte | 4.92e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.15e-08 | 120 |
leukocyte | 1.14e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.20e-10 | 3 |
gastrointestinal system mesentery | 1.20e-10 | 3 |
stomach region | 1.20e-10 | 3 |
mesentery | 1.20e-10 | 3 |
gastrointestinal system serosa | 1.20e-10 | 3 |
mesentery of stomach | 1.20e-10 | 3 |
gut mesentery | 1.20e-10 | 3 |
dorsal mesentery | 1.20e-10 | 3 |
dorsal mesogastrium | 1.20e-10 | 3 |
peritoneal cavity | 1.20e-10 | 3 |
spleen primordium | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.33e-29 | 1 |
monogenic disease | 1.33e-29 | 1 |
xeroderma pigmentosum | 1.33e-29 | 1 |