FFCP PHASE1:Hg19::chr18:19664778..19664789,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:19664778..19664789,+
|short_description=p@chr18:19664778..19664789,+
|description=CAGE_peak_at_chr18:19664778..19664789,+
|association_with_transcript=NA
...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:19664778..19664789,+ | |||
|coexpression_cluster_id=C1723 | |||
|description=CAGE_peak_at_chr18:19664778..19664789,+ | |||
|id=chr18:19664778..19664789,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.49e-11!12;CL:0000417!3.49e-11!12;CL:0000668!3.49e-11!12;CL:0000414!3.49e-11!12;CL:0000412!3.49e-11!12;CL:0000182!3.49e-11!12;CL:0002563!1.20e-09!4;CL:0000313!1.91e-09!1;CL:0000223!4.88e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.05e-25;4!CL:0002253;1.29e-13;2!CL:0002231;1.24e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.66e-26,4;CL:0002253,1.07e-13,2;CL:0002231,1.30e-09,3;CL:0000223,2.95e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2152!1.91e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001155!1.79e-23!9;UBERON:0000059!3.41e-19!11;UBERON:0000160!2.39e-18!27;UBERON:0005409!1.11e-17!35;UBERON:0004921!1.29e-13!129;UBERON:0004185!1.29e-13!129;UBERON:0001007!1.69e-12!155;UBERON:0001555!1.69e-12!155;UBERON:0007026!1.69e-12!155;UBERON:0009854!1.91e-12!23;UBERON:0009497!1.86e-11!25;UBERON:0000015!1.86e-11!25;UBERON:0002423!1.86e-11!25;UBERON:0006235!1.86e-11!25;UBERON:0004161!1.86e-11!25;UBERON:0003929!2.89e-11!54;UBERON:0004119!3.20e-11!169;UBERON:0000925!3.20e-11!169;UBERON:0006595!3.20e-11!169;UBERON:0009856!5.86e-11!26;UBERON:0001154!1.15e-09!1;UBERON:0001153!1.15e-09!1;UBERON:0001242!1.20e-09!4;UBERON:0001262!1.20e-09!4;UBERON:0004786!1.20e-09!4;UBERON:0004808!1.20e-09!4;UBERON:0001277!1.20e-09!4;UBERON:0004911!1.91e-09!1;UBERON:0008835!3.22e-09!22;UBERON:0003894!3.22e-09!22;UBERON:0007499!4.31e-08!25;UBERON:0003350!6.97e-08!5;UBERON:0004907!1.04e-07!5;UBERON:0002107!4.05e-07!19;UBERON:0006925!4.05e-07!19;UBERON:0008836!4.05e-07!19;UBERON:0005911!5.70e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.05e-25;4!UBERON:0001262;1.05e-25;4!UBERON:0004786;1.05e-25;4!UBERON:0004808;1.05e-25;4!UBERON:0001277;1.05e-25;4!UBERON:0001155;2.80e-25;9!UBERON:0000160;2.09e-22;17!UBERON:0000059;7.75e-21;11!UBERON:0005409;1.17e-17;22!UBERON:0000485;3.66e-15;7!UBERON:0003929;3.66e-15;7!UBERON:0003350;2.13e-13;8!UBERON:0004921;1.52e-12;33!UBERON:0001052;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,8.66e-26,4;UBERON:0001262,8.66e-26,4;UBERON:0004786,8.66e-26,4;UBERON:0004808,8.66e-26,4;UBERON:0001277,8.66e-26,4;UBERON:0001155,2.27e-25,9;UBERON:0000160,1.82e-22,17;UBERON:0000059,6.54e-21,11;UBERON:0005409,1.01e-15,25;UBERON:0003350,1.94e-13,8;UBERON:0000485,4.67e-12,9;UBERON:0003929,9.09e-08,54;UBERON:0004921,1.41e-07,118;UBERON:0001052,1.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90344505006945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50492403815704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36277837387947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.755798243562828,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0,3.98104772431402,0.265372693510018,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,1.16495949527454,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90344505006945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50492403815704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36277837387947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.755798243562828,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0,3.98104772431402,0.265372693510018,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,1.16495949527454,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:19664778..19664789,+ | |||
}} | }} |
Latest revision as of 23:52, 25 July 2015
Short description: | p@chr18:19664778..19664789, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:19664778..19664789, + |
Coexpression cluster: | C1723_adenocarcinoma_Intestinal_Prostate_rectal_colon_small_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.66e-26 | 4 |
epithelial cell of large intestine | 1.07e-13 | 2 |
epithelial cell of prostate | 1.30e-09 | 3 |
endodermal cell | 2.95e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 8.66e-26 | 4 |
wall of intestine | 8.66e-26 | 4 |
gastrointestinal system mucosa | 8.66e-26 | 4 |
gastrointestinal system epithelium | 8.66e-26 | 4 |
intestinal epithelium | 8.66e-26 | 4 |
colon | 2.27e-25 | 9 |
intestine | 1.82e-22 | 17 |
large intestine | 6.54e-21 | 11 |
gastrointestinal system | 1.01e-15 | 25 |
epithelium of mucosa | 1.94e-13 | 8 |
simple columnar epithelium | 4.67e-12 | 9 |
gut epithelium | 9.09e-08 | 54 |
subdivision of digestive tract | 1.41e-07 | 118 |
rectum | 1.69e-07 | 4 |