FFCP PHASE1:Hg19::chr18:20493879..20493891,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:20493879..20493891,+
|short_description=p@chr18:20493879..20493891,+
|description=CAGE_peak_at_chr18:20493879..20493891,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:20493879..20493891,+ | |||
|description=CAGE_peak_at_chr18:20493879..20493891,+ | |||
|id=chr18:20493879..20493891,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.16e-20!43;CL:0002166!5.06e-19!3;CL:0002621!7.24e-19!3;CL:0002159!4.68e-16!13;CL:0002368!2.01e-15!13;CL:0000223!8.03e-14!59;CL:0000066!3.39e-12!254;CL:0000240!2.72e-09!6;CL:0000311!2.72e-09!6;CL:0000079!2.72e-09!6;CL:0000237!2.72e-09!6;CL:0000036!2.72e-09!6;CL:0000357!2.72e-09!6;CL:0000114!2.72e-09!6;CL:0002231!2.75e-08!3;CL:0002336!4.06e-07!1;CL:0002261!4.06e-07!1;CL:0002170!4.06e-07!1;CL:0000362!4.11e-07!8;CL:0002327!5.00e-07!4;CL:0002251!8.34e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.22e-59;3!CL:0002621;1.65e-59;3!CL:0002159;6.07e-23;14!CL:0002327;6.65e-21;4!CL:0002251;1.46e-09;20!CL:0002077;9.66e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,5.46e-60,3;CL:0002621,1.83e-59,3;CL:0002159,5.57e-23,14;CL:0002327,7.74e-21,4;CL:0002077,1.05e-09,34;CL:0002251,1.49e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.54e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!7.24e-19!3;UBERON:0001708!2.12e-14!4;UBERON:0001704!2.12e-14!4;UBERON:0002090!9.37e-10!6;UBERON:0001004!1.28e-07!72;UBERON:0001828!2.31e-07!8;UBERON:0000161!3.78e-07!35;UBERON:0007029!3.82e-07!1;UBERON:0001911!5.00e-07!4;UBERON:0005333!5.00e-07!4;UBERON:0008425!5.00e-07!4;UBERON:0005311!5.00e-07!4;UBERON:0001003!7.94e-07!14;UBERON:0007376!7.94e-07!14;UBERON:0007383!7.94e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.65e-59;3!UBERON:0001708;5.66e-45;4!UBERON:0008895;5.66e-45;4!UBERON:0011159;3.66e-36;5!UBERON:0003929;5.08e-26;7!UBERON:0003350;7.19e-23;8!UBERON:0001828;7.19e-23;8!UBERON:0001911;6.65e-21;4!UBERON:0011137;7.09e-17;11!UBERON:0010323;7.09e-17;11!UBERON:0000486;1.69e-15;12!UBERON:0003729;2.33e-14;13!UBERON:0000075;8.10e-12;16!UBERON:0010371;6.43e-11;31!UBERON:0000161;4.95e-10;19!UBERON:0000166;4.95e-10;19!UBERON:0000344;1.46e-09;20!UBERON:0004807;9.55e-09;22!UBERON:0004765;1.67e-07;26!UBERON:0000165;5.41e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.83e-59,3;UBERON:0001708,3.10e-45,4;UBERON:0008895,3.10e-45,4;UBERON:0011159,2.26e-36,5;UBERON:0010188,1.86e-30,6;UBERON:0002539,1.86e-30,6;UBERON:0008816,1.86e-30,6;UBERON:0003350,7.47e-23,8;UBERON:0001828,7.47e-23,8;UBERON:0001911,7.74e-21,4;UBERON:0005333,7.74e-21,4;UBERON:0008425,7.74e-21,4;UBERON:0005311,7.74e-21,4;UBERON:0010323,5.70e-17,11;UBERON:0003729,2.38e-14,13;UBERON:0011137,1.75e-13,14;UBERON:0000033,1.06e-12,56;UBERON:0000075,6.99e-12,16;UBERON:0000153,1.82e-11,62;UBERON:0007811,1.82e-11,62;UBERON:0000076,6.29e-11,8;UBERON:0008814,1.24e-10,18;UBERON:0003102,1.44e-09,99;UBERON:0000344,1.49e-09,20;UBERON:0000166,9.68e-09,22;UBERON:0004807,5.47e-07,28;UBERON:0000165,9.13e-07,29;UBERON:0000930,9.13e-07,29 | |||
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|short_description=p@chr18:20493879..20493891,+ | |||
}} | }} |
Latest revision as of 23:55, 25 July 2015
Short description: | p@chr18:20493879..20493891, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:20493879..20493891, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 5.46e-60 | 3 |
gingival epithelial cell | 1.83e-59 | 3 |
general ecto-epithelial cell | 5.57e-23 | 14 |
mammary gland epithelial cell | 7.74e-21 | 4 |
ecto-epithelial cell | 1.05e-09 | 34 |
epithelial cell of alimentary canal | 1.49e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.83e-59 | 3 |
jaw skeleton | 3.10e-45 | 4 |
splanchnocranium | 3.10e-45 | 4 |
primary subdivision of cranial skeletal system | 2.26e-36 | 5 |
protuberance | 1.86e-30 | 6 |
pharyngeal arch | 1.86e-30 | 6 |
embryonic head | 1.86e-30 | 6 |
epithelium of mucosa | 7.47e-23 | 8 |
gingiva | 7.47e-23 | 8 |
mammary gland | 7.74e-21 | 4 |
mammary bud | 7.74e-21 | 4 |
mammary ridge | 7.74e-21 | 4 |
mammary placode | 7.74e-21 | 4 |
cranial skeletal system | 5.70e-17 | 11 |
mouth mucosa | 2.38e-14 | 13 |
axial skeletal system | 1.75e-13 | 14 |
head | 1.06e-12 | 56 |
subdivision of skeletal system | 6.99e-12 | 16 |
anterior region of body | 1.82e-11 | 62 |
craniocervical region | 1.82e-11 | 62 |
external ectoderm | 6.29e-11 | 8 |
pharyngeal arch system | 1.24e-10 | 18 |
surface structure | 1.44e-09 | 99 |
mucosa | 1.49e-09 | 20 |
oral opening | 9.68e-09 | 22 |
respiratory system epithelium | 5.47e-07 | 28 |
mouth | 9.13e-07 | 29 |
stomodeum | 9.13e-07 | 29 |