FFCP PHASE1:Hg19::chr14:24600819..24600837,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=161247 | |EntrezGene=161247 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33714 | |HGNC=33714 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-421bp_to_ENST00000559294_5end | |association_with_transcript=-421bp_to_ENST00000559294_5end | ||
|cluster_id=chr14:24600819..24600837,+ | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_1_at_FITM1_5end | |description=CAGE_peak_1_at_FITM1_5end | ||
|id=chr14:24600819..24600837,+ | |id=chr14:24600819..24600837,+ | ||
|ontology_enrichment_celltype=CL:0000188!2.64e-14!9;CL:0000594!7.44e-07!3 | |ontology_enrichment_celltype=CL:0000188!2.64e-14!9;CL:0000594!7.44e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000188;3.74e-19;9!CL:0000680;2.63e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.34e-19,9 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.28e-09;4!UBERON:0007284;2.28e-09;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;3.24e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.24e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-12!115;UBERON:0000481!3.74e-08!347;UBERON:0007100!7.41e-08!27;UBERON:0004151!7.85e-08!3;UBERON:0003104!8.10e-08!238;UBERON:0009142!8.10e-08!238;UBERON:0003978!1.19e-07!3;UBERON:0009751!1.19e-07!3;UBERON:0000946!1.19e-07!3;UBERON:0002523!1.19e-07!3;UBERON:0005983!1.19e-07!3;UBERON:0002165!1.19e-07!3;UBERON:0002062!1.19e-07!3;UBERON:0007280!1.19e-07!3;UBERON:0003103!2.78e-07!69;UBERON:0005057!7.04e-07!26 | |ontology_enrichment_uberon=UBERON:0007023!1.18e-12!115;UBERON:0000481!3.74e-08!347;UBERON:0007100!7.41e-08!27;UBERON:0004151!7.85e-08!3;UBERON:0003104!8.10e-08!238;UBERON:0009142!8.10e-08!238;UBERON:0003978!1.19e-07!3;UBERON:0009751!1.19e-07!3;UBERON:0000946!1.19e-07!3;UBERON:0002523!1.19e-07!3;UBERON:0005983!1.19e-07!3;UBERON:0002165!1.19e-07!3;UBERON:0002062!1.19e-07!3;UBERON:0007280!1.19e-07!3;UBERON:0003103!2.78e-07!69;UBERON:0005057!7.04e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.63e-37;16!UBERON:0002036;3.63e-37;16!UBERON:0002385;2.62e-17;31!UBERON:0001015;2.62e-17;31!UBERON:0000383;2.62e-17;31!UBERON:0004151;1.12e-12;3!UBERON:0003978;2.39e-12;3!UBERON:0000946;2.39e-12;3!UBERON:0007100;2.13e-11;25!UBERON:0005090;2.55e-09;2!UBERON:0001630;2.55e-09;2!UBERON:0000341;3.95e-09;2!UBERON:0002081;7.26e-09;2!UBERON:0002133;1.18e-08;2!UBERON:0001829;2.65e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.19e-12,3;UBERON:0003978,2.48e-12,3;UBERON:0009751,2.48e-12,3;UBERON:0000946,2.48e-12,3;UBERON:0002523,2.48e-12,3;UBERON:0005983,2.48e-12,3;UBERON:0002165,2.48e-12,3;UBERON:0002062,2.48e-12,3;UBERON:0007280,2.48e-12,3;UBERON:0007023,6.60e-11,114;UBERON:0007100,2.03e-10,27;UBERON:0005090,2.55e-09,2;UBERON:0001630,2.55e-09,2;UBERON:0000341,3.95e-09,2;UBERON:0002081,7.69e-09,2;UBERON:0010227,7.69e-09,2;UBERON:0002133,1.22e-08,2;UBERON:0001829,2.81e-08,2;UBERON:0003103,3.45e-08,68;UBERON:0001134,1.87e-07,62;UBERON:0002036,1.87e-07,62;UBERON:0003082,1.87e-07,62;UBERON:0002385,3.87e-07,64;UBERON:0001015,3.87e-07,64;UBERON:0000383,3.87e-07,64;UBERON:0003104,8.30e-07,160;UBERON:0009142,8.30e-07,160 | |||
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| ||
|short_description=p1@FITM1 | |short_description=p1@FITM1 | ||
}} | }} |
Latest revision as of 13:17, 19 September 2015
Short description: | p1@FITM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FITM1_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -421bp_to_ENST00000559294_5end |
EntrezGene: | FITM1 |
HGNC: | 33714 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.34e-19 | 9 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.19e-12 | 3 |
valve | 2.48e-12 | 3 |
cardiac mesenchyme | 2.48e-12 | 3 |
cardial valve | 2.48e-12 | 3 |
tunica intima | 2.48e-12 | 3 |
heart layer | 2.48e-12 | 3 |
endocardium | 2.48e-12 | 3 |
endocardial cushion | 2.48e-12 | 3 |
presumptive endocardium | 2.48e-12 | 3 |
adult organism | 6.60e-11 | 114 |
primary circulatory organ | 2.03e-10 | 27 |
muscle structure | 2.55e-09 | 2 |
muscle organ | 2.55e-09 | 2 |
throat | 3.95e-09 | 2 |
cardiac atrium | 7.69e-09 | 2 |
future cardiac atrium | 7.69e-09 | 2 |
atrioventricular valve | 1.22e-08 | 2 |
major salivary gland | 2.81e-08 | 2 |
compound organ | 3.45e-08 | 68 |
skeletal muscle tissue | 1.87e-07 | 62 |
striated muscle tissue | 1.87e-07 | 62 |
myotome | 1.87e-07 | 62 |
muscle tissue | 3.87e-07 | 64 |
musculature | 3.87e-07 | 64 |
musculature of body | 3.87e-07 | 64 |
mesenchyme | 8.30e-07 | 160 |
entire embryonic mesenchyme | 8.30e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.24e-09 | 2 |