FFCP PHASE1:Hg19::chr14:96000850..96000861,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27510 | |HGNC=27510 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_ENST00000555866_5end | |association_with_transcript=61bp_to_ENST00000555866_5end | ||
|cluster_id=chr14:96000850..96000861,- | |||
|coexpression_cluster_id=C3467 | |coexpression_cluster_id=C3467 | ||
|description=CAGE_peak_8_at_SNHG10_5end | |description=CAGE_peak_8_at_SNHG10_5end | ||
|id=chr14:96000850..96000861,- | |id=chr14:96000850..96000861,- | ||
|ontology_enrichment_celltype=CL:0000945!4.29e-19!24;CL:0000826!4.29e-19!24;CL:0000542!4.60e-19!53;CL:0000051!4.60e-19!53;CL:0000838!3.79e-18!52;CL:0000236!3.99e-11!14;CL:0000988!5.65e-07!182 | |ontology_enrichment_celltype=CL:0000945!4.29e-19!24;CL:0000826!4.29e-19!24;CL:0000542!4.60e-19!53;CL:0000051!4.60e-19!53;CL:0000838!3.79e-18!52;CL:0000236!3.99e-11!14;CL:0000988!5.65e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.46e-29;24!CL:0000542;8.85e-12;53!CL:0000236;1.66e-09;13!CL:0000817;3.57e-09;1!CL:0000785;3.86e-09;1!CL:0000819;3.86e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.75e-29,24;CL:0000826,1.75e-29,24;CL:0000542,3.42e-18,53;CL:0000051,3.42e-18,53;CL:0000838,1.61e-15,52;CL:0000817,2.29e-11,3;CL:0000819,3.87e-09,1;CL:0000988,6.83e-09,177;CL:0000236,7.31e-09,14;CL:0002087,1.78e-08,115;CL:0002032,1.42e-07,161;CL:0000837,1.42e-07,161;CL:0000037,3.82e-07,168;CL:0000738,8.07e-07,136;CL:0002031,9.99e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;8.85e-12;53 | |||
|ontology_enrichment_disease=DOID:2531!5.51e-16!51;DOID:0060083!5.51e-16!51;DOID:1240!7.85e-10!39;DOID:0060058!8.33e-08!10 | |ontology_enrichment_disease=DOID:2531!5.51e-16!51;DOID:0060083!5.51e-16!51;DOID:1240!7.85e-10!39;DOID:0060058!8.33e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.92e-12;10!DOID:0060073;3.86e-09;1!DOID:8675;3.86e-09;1!DOID:4960;4.51e-09;1!DOID:0070004;4.51e-09;1!DOID:12603;1.09e-08;1!DOID:3347;1.09e-08;1!DOID:2355;1.09e-08;1!DOID:2531;1.29e-08;51!DOID:0060083;1.29e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.68e-16,51;DOID:0060083,6.68e-16,51;DOID:0060058,4.49e-12,10;DOID:0060073,3.87e-09,1;DOID:8675,3.87e-09,1;DOID:4960,4.19e-09,1;DOID:0070004,4.19e-09,1;DOID:12603,6.65e-09,1;DOID:3347,8.36e-09,1;DOID:2355,1.91e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001474;3.75e-10;18!UBERON:0007195;1.09e-08;1!UBERON:0004765;5.77e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.53e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0.783556884599516,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0.840547463227464,1.9704141467987,1.33808328233255,0,0,0,0,0,0,1.47187681102573,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.764546456250458,1.32171328579026,0,1.05353633910031,0.393419540227666,0,0.205601498999509,0.501559486172034,0,0,0,0.334231370655521,0,0.221533894583621,0,0,0.390178042679635,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.397227542439656,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.448346041655403,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.675105328965065,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0.224170287987055,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0.462629081407967,0.355123450626254,0.492762936082855,0,0.232420756919918,0,0.200506470303285,0,0,0.364182336013434,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0.325378394664303,0,0.183138929636687,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0.460511024178389,0.689182862422653,0.214840489736547,0,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,1.48642540100575,6.34784537096357,0.355709216742071,0.318852545457645,0,0,0.211673582723883,0,0.561594356226918,9.81409119842727,0.313359791546046,0,0,0.802940375518498,0.80719882876419,0.425846237690326,0,0,0,1.00109485027145,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0.179021174675609,0.511572370226872,0,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0.533034776018635,2.04386596391473,1.56980256395025,0.166211681900156,0,0.392125068635479,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0,0,0.889563386041866,0.494255755786011,1.25306339406546,0,0,0,4.74382451960732,0,0.242780379534093,0,0,0,0.189559738885464,0.450970258243478,0.103688191397247,0,0,0.313932918407225,0,0,0.277349346026277,0,0,0,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0.288109595976299,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0,0,0.0984274815147488,1.01607998478941,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.170388021785422,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0.197611631897944,1.21792598380896,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0.235265819698172,0.468334905806882,2.8984205722165,0.298509605773748,0.934853239388898,0,0.378806010550178,1.0062716070103,0,0.228840068396924,0.604923695052956,0.777186002913902,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0.59996218756479,0.426766918776564,2.92765465423387,0,0.184105950251841,0,0,0.511577485214607,0.539124056983409,0,0,0.848662649770126,0.637724760305049,0.619678821295011,0,0,9.69999463515416,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.183428598521679,0,0.381382095467167,1.3807198521202,1.39241355481392,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0.171488009437418,0.0679697329768317,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0.397901550322736,0,0,0.109940516745429,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0,0.8453114551668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| ||
|short_description=p8@SNHG10 | |short_description=p8@SNHG10 | ||
}} | }} |
Latest revision as of 19:33, 16 September 2015
Short description: | p8@SNHG10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SNHG10_5end |
Coexpression cluster: | C3467_acute_non_diffuse_chronic_myeloma_merkel_B |
Association with transcript: | 61bp_to_ENST00000555866_5end |
EntrezGene: | NA |
HGNC: | 27510 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.75e-29 | 24 |
pro-B cell | 1.75e-29 | 24 |
lymphocyte | 3.42e-18 | 53 |
common lymphoid progenitor | 3.42e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.61e-15 | 52 |
precursor B cell | 2.29e-11 | 3 |
B-1 B cell | 3.87e-09 | 1 |
hematopoietic cell | 6.83e-09 | 177 |
B cell | 7.31e-09 | 14 |
nongranular leukocyte | 1.78e-08 | 115 |
hematopoietic oligopotent progenitor cell | 1.42e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-07 | 161 |
hematopoietic stem cell | 3.82e-07 | 168 |
leukocyte | 8.07e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 9.99e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.53e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.68e-16 | 51 |
immune system cancer | 6.68e-16 | 51 |
lymphoma | 4.49e-12 | 10 |
lymphatic system cancer | 3.87e-09 | 1 |
lymphosarcoma | 3.87e-09 | 1 |
bone marrow cancer | 4.19e-09 | 1 |
myeloma | 4.19e-09 | 1 |
acute leukemia | 6.65e-09 | 1 |
osteosarcoma | 8.36e-09 | 1 |
anemia | 1.91e-08 | 1 |