FFCP PHASE1:Hg19::chr15:52497258..52497274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:52497258..52497274,- | |||
|coexpression_cluster_id=C159 | |coexpression_cluster_id=C159 | ||
|description=CAGE_peak_at_chr15:52497258..52497274,- | |description=CAGE_peak_at_chr15:52497258..52497274,- | ||
|id=chr15:52497258..52497274,- | |id=chr15:52497258..52497274,- | ||
|ontology_enrichment_celltype=CL:0000039!4.33e-07!7;CL:0000586!4.33e-07!7 | |ontology_enrichment_celltype=CL:0000039!4.33e-07!7;CL:0000586!4.33e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002363;1.07e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.27e-17,2;CL:0000008,1.27e-17,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.07e-17;2!UBERON:0009117;3.36e-14;10!UBERON:0005564;3.36e-14;10 | |||
|ontology_enrichment_disease=DOID:9119!3.65e-12!1;DOID:1799!7.76e-12!1;DOID:10165!7.76e-12!1;DOID:1798!7.76e-12!1 | |ontology_enrichment_disease=DOID:9119!3.65e-12!1;DOID:1799!7.76e-12!1;DOID:10165!7.76e-12!1;DOID:1798!7.76e-12!1 | ||
|ontology_enrichment_disease_v019=DOID:9119;7.05e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,5.05e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002294!8.84e-07!7;UBERON:0001173!8.84e-07!7;UBERON:0004912!8.84e-07!7 | |ontology_enrichment_uberon=UBERON:0002294!8.84e-07!7;UBERON:0001173!8.84e-07!7;UBERON:0004912!8.84e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003566;1.07e-17;2!UBERON:0001777;1.07e-17;2!UBERON:0000473;1.78e-17;8!UBERON:0003135;5.26e-13;11!UBERON:0003891;1.57e-09;4!UBERON:0000964;1.57e-09;4!UBERON:0010409;1.57e-09;4!UBERON:0000991;2.82e-07;21!UBERON:0003101;5.49e-07;22!UBERON:0000079;5.49e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,1.27e-17,2;UBERON:0001777,1.27e-17,2;UBERON:0000473,1.85e-17,8;UBERON:0003135,5.42e-13,11;UBERON:0003891,1.70e-09,4;UBERON:0000964,1.70e-09,4;UBERON:0010409,1.70e-09,4;UBERON:0004348,1.70e-09,4;UBERON:0005427,1.70e-09,4;UBERON:0000991,2.86e-07,21;UBERON:0009196,2.86e-07,21;UBERON:0009117,2.86e-07,21;UBERON:0005564,2.86e-07,21;UBERON:0004176,5.57e-07,22;UBERON:0003101,5.57e-07,22;UBERON:0000079,5.57e-07,22 | |||
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|short_description=p@chr15:52497258..52497274,- | |short_description=p@chr15:52497258..52497274,- | ||
}} | }} |
Latest revision as of 02:32, 25 July 2015
Short description: | p@chr15:52497258..52497274, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:52497258..52497274, - |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.27e-17 | 2 |
migratory cranial neural crest cell | 1.27e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 1.27e-17 | 2 |
substantia propria of cornea | 1.27e-17 | 2 |
testis | 1.85e-17 | 8 |
male reproductive organ | 5.42e-13 | 11 |
stroma | 1.70e-09 | 4 |
cornea | 1.70e-09 | 4 |
eye surface | 1.70e-09 | 4 |
optic eminence | 1.70e-09 | 4 |
corneal primordium | 1.70e-09 | 4 |
gonad | 2.86e-07 | 21 |
indifferent external genitalia | 2.86e-07 | 21 |
indifferent gonad | 2.86e-07 | 21 |
gonad primordium | 2.86e-07 | 21 |
external genitalia | 5.57e-07 | 22 |
male organism | 5.57e-07 | 22 |
male reproductive system | 5.57e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 5.05e-34 | 1 |