FFCP PHASE1:Hg19::chr16:27732614..27732641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:27732614..27732641,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_at_chr16:27732614..27732641,+ | |description=CAGE_peak_at_chr16:27732614..27732641,+ | ||
|id=chr16:27732614..27732641,+ | |id=chr16:27732614..27732641,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;8.59e-07;15!CL:0000125;8.59e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,8.59e-07,15;CL:0000125,8.59e-07,15;CL:0000030,8.59e-07,15;CL:0000339,8.59e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.51e-34;3!UBERON:0006238;5.29e-10;10!UBERON:0006215;1.81e-09;3!CL:0000339;8.59e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;3.01e-09;11!DOID:5409;1.92e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.01e-09,11;DOID:5409,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.98e-48!57;UBERON:0005068!1.98e-48!57;UBERON:0006241!1.98e-48!57;UBERON:0007135!1.98e-48!57;UBERON:0002616!1.20e-46!59;UBERON:0000955!3.32e-46!69;UBERON:0006238!3.32e-46!69;UBERON:0005743!8.79e-43!86;UBERON:0001017!1.58e-41!82;UBERON:0002020!4.08e-40!34;UBERON:0003528!4.08e-40!34;UBERON:0003075!5.84e-40!86;UBERON:0007284!5.84e-40!86;UBERON:0000073!2.80e-38!94;UBERON:0001016!2.80e-38!94;UBERON:0002346!5.89e-38!90;UBERON:0002780!2.08e-37!41;UBERON:0001890!2.08e-37!41;UBERON:0006240!2.08e-37!41;UBERON:0003080!1.91e-36!42;UBERON:0003056!6.09e-34!61;UBERON:0002791!8.34e-32!33;UBERON:0001893!8.32e-31!34;UBERON:0007023!1.13e-28!115;UBERON:0001869!1.93e-28!32;UBERON:0000033!1.93e-28!123;UBERON:0000153!7.16e-27!129;UBERON:0007811!7.16e-27!129;UBERON:0002298!4.03e-24!8;UBERON:0001950!4.38e-23!20;UBERON:0000956!3.03e-22!25;UBERON:0000203!3.03e-22!25;UBERON:0002308!1.77e-21!9;UBERON:0000125!1.77e-21!9;UBERON:0002619!6.32e-21!22;UBERON:0004121!8.82e-21!169;UBERON:0000924!3.58e-20!173;UBERON:0006601!3.58e-20!173;UBERON:0001896!4.34e-17!3;UBERON:0005290!4.34e-17!3;UBERON:0010096!4.34e-17!3;UBERON:0006331!5.11e-17!3;UBERON:0004733!4.66e-16!12;UBERON:0002028!4.66e-16!12;UBERON:0007277!4.66e-16!12;UBERON:0002420!4.31e-15!9;UBERON:0007245!4.31e-15!9;UBERON:0010009!4.31e-15!9;UBERON:0010011!4.31e-15!9;UBERON:0000454!4.31e-15!9;UBERON:0004732!8.84e-15!13;UBERON:0001905!8.15e-13!2;UBERON:0002757!8.15e-13!2;UBERON:0010134!8.15e-13!2;UBERON:0002784!8.15e-13!2;UBERON:0005408!8.15e-13!2;UBERON:0001899!8.15e-13!2;UBERON:0009663!8.35e-13!7;UBERON:0003076!9.83e-13!15;UBERON:0003057!9.83e-13!15;UBERON:0000064!2.67e-12!219;UBERON:0000025!5.10e-12!194;UBERON:0002148!5.84e-12!2;UBERON:0009662!5.84e-12!2;UBERON:0001871!9.00e-11!7;UBERON:0001872!3.87e-10!5;UBERON:0004111!1.15e-08!241;UBERON:0000200!2.05e-08!6;UBERON:0000988!2.95e-08!3;UBERON:0002771!5.44e-08!3;UBERON:0000483!5.47e-08!309;UBERON:0001894!6.14e-08!7;UBERON:0006222!6.14e-08!7;UBERON:0000119!7.41e-08!312;UBERON:0000475!2.65e-07!365;UBERON:0000062!3.75e-07!511;UBERON:0001874!5.57e-07!1;UBERON:0001154!5.89e-07!1;UBERON:0001153!5.89e-07!1;UBERON:0001882!6.60e-07!1;UBERON:0005403!6.60e-07!1;UBERON:0003296!8.29e-07!4;UBERON:0010133!8.29e-07!4;UBERON:0002038!9.25e-07!1;UBERON:0009661!9.25e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!1.98e-48!57;UBERON:0005068!1.98e-48!57;UBERON:0006241!1.98e-48!57;UBERON:0007135!1.98e-48!57;UBERON:0002616!1.20e-46!59;UBERON:0000955!3.32e-46!69;UBERON:0006238!3.32e-46!69;UBERON:0005743!8.79e-43!86;UBERON:0001017!1.58e-41!82;UBERON:0002020!4.08e-40!34;UBERON:0003528!4.08e-40!34;UBERON:0003075!5.84e-40!86;UBERON:0007284!5.84e-40!86;UBERON:0000073!2.80e-38!94;UBERON:0001016!2.80e-38!94;UBERON:0002346!5.89e-38!90;UBERON:0002780!2.08e-37!41;UBERON:0001890!2.08e-37!41;UBERON:0006240!2.08e-37!41;UBERON:0003080!1.91e-36!42;UBERON:0003056!6.09e-34!61;UBERON:0002791!8.34e-32!33;UBERON:0001893!8.32e-31!34;UBERON:0007023!1.13e-28!115;UBERON:0001869!1.93e-28!32;UBERON:0000033!1.93e-28!123;UBERON:0000153!7.16e-27!129;UBERON:0007811!7.16e-27!129;UBERON:0002298!4.03e-24!8;UBERON:0001950!4.38e-23!20;UBERON:0000956!3.03e-22!25;UBERON:0000203!3.03e-22!25;UBERON:0002308!1.77e-21!9;UBERON:0000125!1.77e-21!9;UBERON:0002619!6.32e-21!22;UBERON:0004121!8.82e-21!169;UBERON:0000924!3.58e-20!173;UBERON:0006601!3.58e-20!173;UBERON:0001896!4.34e-17!3;UBERON:0005290!4.34e-17!3;UBERON:0010096!4.34e-17!3;UBERON:0006331!5.11e-17!3;UBERON:0004733!4.66e-16!12;UBERON:0002028!4.66e-16!12;UBERON:0007277!4.66e-16!12;UBERON:0002420!4.31e-15!9;UBERON:0007245!4.31e-15!9;UBERON:0010009!4.31e-15!9;UBERON:0010011!4.31e-15!9;UBERON:0000454!4.31e-15!9;UBERON:0004732!8.84e-15!13;UBERON:0001905!8.15e-13!2;UBERON:0002757!8.15e-13!2;UBERON:0010134!8.15e-13!2;UBERON:0002784!8.15e-13!2;UBERON:0005408!8.15e-13!2;UBERON:0001899!8.15e-13!2;UBERON:0009663!8.35e-13!7;UBERON:0003076!9.83e-13!15;UBERON:0003057!9.83e-13!15;UBERON:0000064!2.67e-12!219;UBERON:0000025!5.10e-12!194;UBERON:0002148!5.84e-12!2;UBERON:0009662!5.84e-12!2;UBERON:0001871!9.00e-11!7;UBERON:0001872!3.87e-10!5;UBERON:0004111!1.15e-08!241;UBERON:0000200!2.05e-08!6;UBERON:0000988!2.95e-08!3;UBERON:0002771!5.44e-08!3;UBERON:0000483!5.47e-08!309;UBERON:0001894!6.14e-08!7;UBERON:0006222!6.14e-08!7;UBERON:0000119!7.41e-08!312;UBERON:0000475!2.65e-07!365;UBERON:0000062!3.75e-07!511;UBERON:0001874!5.57e-07!1;UBERON:0001154!5.89e-07!1;UBERON:0001153!5.89e-07!1;UBERON:0001882!6.60e-07!1;UBERON:0005403!6.60e-07!1;UBERON:0003296!8.29e-07!4;UBERON:0010133!8.29e-07!4;UBERON:0002038!9.25e-07!1;UBERON:0009661!9.25e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0000966;7.35e-21;5!UBERON:0005388;7.35e-21;5!UBERON:0001802;7.35e-21;5!UBERON:0001894;2.47e-15;7!UBERON:0000970;7.40e-12;20!UBERON:0002104;2.52e-11;21!UBERON:0000020;2.12e-10;23!UBERON:0001032;5.40e-10;24!UBERON:0004456;5.40e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0000966,1.44e-17,6;UBERON:0005388,1.44e-17,6;UBERON:0001802,1.44e-17,6;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0000970,2.52e-11,21;UBERON:0002104,2.52e-11,21;UBERON:0000020,5.40e-10,24;UBERON:0001032,5.40e-10,24;UBERON:0004456,5.40e-10,24;UBERON:0000955,4.08e-09,68;UBERON:0006238,4.08e-09,68;UBERON:0003075,9.98e-08,82;UBERON:0007284,9.98e-08,82;UBERON:0001017,1.03e-07,81;UBERON:0002346,2.23e-07,86;UBERON:0001016,5.66e-07,89;UBERON:0003056,7.17e-07,61 | |||
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|short_description=p@chr16:27732614..27732641,+ | |short_description=p@chr16:27732614..27732641,+ | ||
}} | }} |
Latest revision as of 07:34, 25 July 2015
Short description: | p@chr16:27732614..27732641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:27732614..27732641, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 8.59e-07 | 15 |
glial cell | 8.59e-07 | 15 |
glioblast | 8.59e-07 | 15 |
glioblast (sensu Vertebrata) | 8.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
regional part of diencephalon | 5.23e-26 | 4 |
retina | 1.44e-17 | 6 |
photoreceptor array | 1.44e-17 | 6 |
posterior segment of eyeball | 1.44e-17 | 6 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
eye | 2.52e-11 | 21 |
visual system | 2.52e-11 | 21 |
sense organ | 5.40e-10 | 24 |
sensory system | 5.40e-10 | 24 |
entire sense organ system | 5.40e-10 | 24 |
brain | 4.08e-09 | 68 |
future brain | 4.08e-09 | 68 |
neural plate | 9.98e-08 | 82 |
presumptive neural plate | 9.98e-08 | 82 |
central nervous system | 1.03e-07 | 81 |
neurectoderm | 2.23e-07 | 86 |
nervous system | 5.66e-07 | 89 |
pre-chordal neural plate | 7.17e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.01e-09 | 11 |
lung small cell carcinoma | 1.92e-07 | 4 |