FFCP PHASE1:Hg19::chr17:76850123..76850137,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:76850123..76850137,- | |||
|coexpression_cluster_id=C706 | |coexpression_cluster_id=C706 | ||
|description=CAGE_peak_at_chr17:76850123..76850137,- | |description=CAGE_peak_at_chr17:76850123..76850137,- | ||
|id=chr17:76850123..76850137,- | |id=chr17:76850123..76850137,- | ||
|ontology_enrichment_celltype=CL:0000055!1.03e-19!180;CL:0000057!3.75e-14!75;CL:0000183!7.00e-08!59;CL:0002334!1.44e-07!12;CL:0002620!2.12e-07!23;CL:0000680!5.67e-07!57;CL:0000056!5.67e-07!57;CL:0000355!5.67e-07!57;CL:0000222!6.11e-07!119;CL:0000192!8.69e-07!42;CL:0000514!8.69e-07!42 | |ontology_enrichment_celltype=CL:0000055!1.03e-19!180;CL:0000057!3.75e-14!75;CL:0000183!7.00e-08!59;CL:0002334!1.44e-07!12;CL:0002620!2.12e-07!23;CL:0000680!5.67e-07!57;CL:0000056!5.67e-07!57;CL:0000355!5.67e-07!57;CL:0000222!6.11e-07!119;CL:0000192!8.69e-07!42;CL:0000514!8.69e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.70e-10;23!CL:0002334;1.76e-09;12!CL:0000499;2.06e-07;28!CL:0002320;5.63e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.10e-16,76;CL:0000048,4.68e-11,427;CL:0000723,1.52e-10,433;CL:0002620,5.86e-10,23;CL:0000034,6.86e-10,441;CL:0002334,1.20e-09,12;CL:0002320,1.07e-08,361;CL:0000134,1.86e-08,354;CL:0000219,6.45e-08,386;CL:0000499,3.68e-07,28;CL:0000136,6.57e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.40e-07!659;UBERON:0000914!6.61e-07!83;UBERON:0002329!6.61e-07!83;UBERON:0003077!6.61e-07!83;UBERON:0003059!6.61e-07!83;UBERON:0007282!6.61e-07!83;UBERON:0009618!6.61e-07!83;UBERON:0007285!6.61e-07!83 | |ontology_enrichment_uberon=UBERON:0000468!3.40e-07!659;UBERON:0000914!6.61e-07!83;UBERON:0002329!6.61e-07!83;UBERON:0003077!6.61e-07!83;UBERON:0003059!6.61e-07!83;UBERON:0007282!6.61e-07!83;UBERON:0009618!6.61e-07!83;UBERON:0007285!6.61e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.74e-12;9!UBERON:0000042;8.74e-12;9!UBERON:0003688;9.52e-11;6!UBERON:0002358;9.52e-11;6!UBERON:0003684;9.52e-11;6!UBERON:0001178;9.52e-11;6!UBERON:0002384;4.02e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.08e-11,6;UBERON:0002358,9.08e-11,6;UBERON:0003684,9.08e-11,6;UBERON:0001178,9.08e-11,6;UBERON:0002384,2.22e-08,371;UBERON:0004457,2.56e-08,12;UBERON:0000042,2.56e-08,12;UBERON:0002199,5.03e-08,46;UBERON:0002416,5.03e-08,46;UBERON:0002097,1.19e-07,41 | |||
|phase1_expression=3.81524596468169,5.56661362116556,3.94672331468719,4.00293193412522,5.36353313312745,1.74467704820074,0,0,1.30592814099919,0.491467873003018,0,0,0.263766978228454,0.247532705920093,0.331397375727916,0.672325146451775,1.20538905604795,1.46062018077475,1.46379839637152,0.369363174230364,1.22400414746552,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0.601633342410425,0,0.223915474239924,0.32389366601898,0,0.726991193897824,0.377875943688809,0.242584061187816,1.16214518452842,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0.398927315243264,0,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,2.1686349143074,0.50133791063589,0.869079113764942,3.1811437882044,0,0.189069634328136,0.443458794925128,0,0.130979075497713,0,0,0.649094787309367,0.522389211897802,0.930705723632056,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0.760272105718513,0.976248230192678,0.367663080345869,0,0.535798369704479,0,0,0,0,0.366403487860815,0,0,0,2.48485975847659,0.886413581652058,0.397227542439656,2.0078563452417,0.354668382198357,1.12135520028461,0,1.48000529050296,0,0.269421344139376,0.326923806226917,0.908144565869588,0,0,0.624320153660641,0,1.34503812496621,0.23486899728753,0.161872944368132,0.421352420106746,0.61246251376468,0.61417158655884,0.516628905878827,2.37600571456411,1.97813543422845,0.910161361938026,1.43723628363248,0.505008341862199,0.625592599359821,0,1.31693286264251,1.22595118319608,0.45071417671979,0.113432183160021,3.58779271377724,1.2813443329114,0.635795703478686,2.70081986475962,1.03052529238439,1.54584324027377,1.11670113798954,1.85653965465393,1.75386609290158,1.7670364197088,1.28869858099219,1.61646056818812,2.4850671476163,0.806016785821122,1.18692414617341,0,0,0,0,0,0.232387885739037,0,0,0,0,2.57296375277154,0,4.64367928031979,0,0.236613600079688,0.168584690078102,1.20505514941741,0.220587945464788,0,0,0.539325232640658,0.588664395376038,0.769494313892781,0.738155454624648,2.80483547606892,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.952468414382536,0.381988425558278,1.17217447210047,0,3.08482478109971,1.20137223137567,1.71495859578347,0.112131084345361,0,0.5867062865676,0.517086863031111,0,0,3.19125739901845,2.08014873822732,0,0,0.266422179016099,0.57191197463259,1.62786481617433,0.823240336780769,0,0.355391948742546,1.58390374586686,1.20575750823834,0,4.1988656296464,2.43247561282381,2.51128545716063,4.21667878966063,0.479249710983165,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0,0,1.27047312111232,0,1.54657762555539,0.502548796003046,0,0,2.99161459204025,0,0.613457458595699,1.00034104211935,0.271265023699736,1.03985430765404,4.10386674233472,2.05013139544115,0.819989904948992,0.601892199455438,0,3.10419213877515,0,0.368738337083406,1.30325421702124,0.979005787313703,1.37257369524342,0,0,0.320182673410333,0,0,0,4.46594054073798,0.920771839728375,6.17452207752762,4.35673107469383,2.55853624533352,8.36440389946759,1.48418066444991,1.54209693802656,0.887808626565635,0.328508624055237,2.59627214591811,1.39452454151951,0,0.200506470303285,0.276242966807689,0.459257792658427,1.27463817604702,2.22911505431021,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,1.08378575017541,1.50506932156456,0,0,0.223874754722178,0,0,0,0.328014645699706,1.62689197332152,0.412164046590889,0.183138929636687,0,0,0,1.6068392984416,0.870036464629098,0.308097234229289,0,0.137836572484531,0.429680979473094,0.435050081742686,0.426133137080504,0.534192213880424,0.165284915360978,0,0,0,0.464845549297286,4.7221852024596,0.6970372701606,0.616067160352178,0,0,0.74129687641568,0,0,0.632758849437452,0.571890581771475,0.767693373934002,0.855877976067841,0.636406495851874,1.56989728039846,0.179872457583315,1.09814811894422,0.824686816419805,0.404364963146632,0,0,1.46290121726877,2.68084838594413,2.11300293513511,0.818999468447914,1.27264888758341,1.13008116620243,0,1.32687795048244,1.31535265576129,1.73632660280006,0.655894752046633,0,0.92947049429925,1.12678241012897,0.286822704408103,0.491245205065606,0.35667105148125,1.06428319221179,3.37772216476263,2.30506425071931,0.379473173765715,0.699869440489966,0,0,0,0.753150406214233,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0.28413614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| ||
|short_description=p@chr17:76850123..76850137,- | |short_description=p@chr17:76850123..76850137,- | ||
}} | }} |
Latest revision as of 22:07, 25 July 2015
Short description: | p@chr17:76850123..76850137, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76850123..76850137, - |
Coexpression cluster: | C706_Adipocyte_Preadipocyte_tenocyte_leiomyoma_chorionic_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.10e-16 | 76 |
multi fate stem cell | 4.68e-11 | 427 |
somatic stem cell | 1.52e-10 | 433 |
skin fibroblast | 5.86e-10 | 23 |
stem cell | 6.86e-10 | 441 |
preadipocyte | 1.20e-09 | 12 |
connective tissue cell | 1.07e-08 | 361 |
mesenchymal cell | 1.86e-08 | 354 |
motile cell | 6.45e-08 | 386 |
stromal cell | 3.68e-07 | 28 |
fat cell | 6.57e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.08e-11 | 6 |
peritoneum | 9.08e-11 | 6 |
abdominal cavity | 9.08e-11 | 6 |
visceral peritoneum | 9.08e-11 | 6 |
connective tissue | 2.22e-08 | 371 |
cavity lining | 2.56e-08 | 12 |
serous membrane | 2.56e-08 | 12 |
integument | 5.03e-08 | 46 |
integumental system | 5.03e-08 | 46 |
skin of body | 1.19e-07 | 41 |