FFCP PHASE1:Hg19::chr18:26736784..26736799,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:26736784..26736799,+ | |||
|coexpression_cluster_id=C268 | |coexpression_cluster_id=C268 | ||
|description=CAGE_peak_at_chr18:26736784..26736799,+ | |description=CAGE_peak_at_chr18:26736784..26736799,+ | ||
|id=chr18:26736784..26736799,+ | |id=chr18:26736784..26736799,+ | ||
|ontology_enrichment_celltype=CL:0002159!1.99e-24!13;CL:0002076!9.98e-21!43;CL:0002368!9.01e-19!13;CL:0002166!1.09e-16!3;CL:0002621!2.04e-16!3;CL:0000066!2.14e-16!254;CL:0000362!6.81e-16!8;CL:0000223!2.83e-14!59;CL:0000240!4.64e-14!6;CL:0000311!4.64e-14!6;CL:0000079!4.64e-14!6;CL:0000237!4.64e-14!6;CL:0000036!4.64e-14!6;CL:0000357!4.64e-14!6;CL:0000114!4.64e-14!6;CL:0000244!2.18e-12!4;CL:0000731!2.18e-12!4;CL:0002077!4.49e-11!33;CL:0000220!4.51e-11!246;CL:0000317!4.52e-11!2;CL:1000448!4.52e-11!2;CL:0002308!4.52e-11!2;CL:0002140!4.52e-11!2;CL:0002321!6.21e-11!248;CL:0000076!6.39e-11!62;CL:0000312!6.16e-10!5;CL:0000221!5.44e-09!71;CL:0002251!2.13e-08!21;CL:0000068!4.99e-08!3;CL:0000069!4.99e-08!3;CL:0000307!4.99e-08!3;CL:0000377!4.99e-08!3 | |ontology_enrichment_celltype=CL:0002159!1.99e-24!13;CL:0002076!9.98e-21!43;CL:0002368!9.01e-19!13;CL:0002166!1.09e-16!3;CL:0002621!2.04e-16!3;CL:0000066!2.14e-16!254;CL:0000362!6.81e-16!8;CL:0000223!2.83e-14!59;CL:0000240!4.64e-14!6;CL:0000311!4.64e-14!6;CL:0000079!4.64e-14!6;CL:0000237!4.64e-14!6;CL:0000036!4.64e-14!6;CL:0000357!4.64e-14!6;CL:0000114!4.64e-14!6;CL:0000244!2.18e-12!4;CL:0000731!2.18e-12!4;CL:0002077!4.49e-11!33;CL:0000220!4.51e-11!246;CL:0000317!4.52e-11!2;CL:1000448!4.52e-11!2;CL:0002308!4.52e-11!2;CL:0002140!4.52e-11!2;CL:0002321!6.21e-11!248;CL:0000076!6.39e-11!62;CL:0000312!6.16e-10!5;CL:0000221!5.44e-09!71;CL:0002251!2.13e-08!21;CL:0000068!4.99e-08!3;CL:0000069!4.99e-08!3;CL:0000307!4.99e-08!3;CL:0000377!4.99e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002159;8.19e-31;14!CL:0002166;3.93e-28;3!CL:0002621;1.08e-27;3!CL:0000240;5.28e-24;6!CL:0000311;5.28e-24;6!CL:0000079;5.28e-24;6!CL:0000237;5.28e-24;6!CL:0002076;5.77e-24;42!CL:0002368;1.47e-17;13!CL:0000312;1.05e-16;5!CL:0000362;4.19e-16;9!CL:0002251;7.84e-16;20!CL:0000307;3.57e-13;3!CL:0002077;3.03e-11;34!CL:0000244;2.68e-10;4!CL:0000731;2.68e-10;4!CL:0002336;3.29e-10;1!CL:0002261;3.29e-10;1!CL:0002170;3.29e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,7.00e-31,14;CL:0002076,3.18e-29,42;CL:0002166,2.99e-28,3;CL:0002621,9.01e-28,3;CL:0000240,4.54e-24,6;CL:0000311,4.54e-24,6;CL:0000079,4.54e-24,6;CL:0000237,4.54e-24,6;CL:0000036,4.54e-24,6;CL:0000357,4.54e-24,6;CL:0000114,4.54e-24,6;CL:0000223,1.21e-20,58;CL:0002368,1.42e-17,13;CL:0000312,9.65e-17,5;CL:0000362,4.11e-16,9;CL:0002251,8.06e-16,20;CL:0000066,2.64e-14,253;CL:0000068,3.36e-13,3;CL:0000069,3.36e-13,3;CL:0000307,3.36e-13,3;CL:0000377,3.36e-13,3;CL:0002077,2.51e-12,34;CL:0000244,2.75e-10,4;CL:0000731,2.75e-10,4;CL:0002336,3.01e-10,1;CL:0002261,3.01e-10,1;CL:0002170,3.01e-10,1;CL:0002321,5.04e-10,250;CL:0000221,8.25e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000357;5.28e-24;6!CL:0000114;5.28e-24;6!CL:0000377;3.57e-13;3!CL:0000223;6.03e-13;58 | |||
|ontology_enrichment_disease=DOID:1749!1.28e-08!14 | |ontology_enrichment_disease=DOID:1749!1.28e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001949;1.08e-27;3!UBERON:0003729;1.51e-24;13!UBERON:0001708;2.85e-21;4!UBERON:0008895;2.85e-21;4!UBERON:0000486;5.71e-19;12!UBERON:0011159;3.82e-17;5!UBERON:0000344;7.84e-16;20!UBERON:0010371;1.42e-13;31!UBERON:0003929;3.15e-12;7!UBERON:0000161;7.88e-12;19!UBERON:0000166;7.88e-12;19!UBERON:0000165;3.43e-11;28!UBERON:0003350;9.10e-11;8!UBERON:0001828;9.10e-11;8!UBERON:0003343;4.55e-10;4!UBERON:0004785;4.55e-10;4!UBERON:0001003;9.45e-10;15!UBERON:0007376;9.45e-10;15!UBERON:0000365;2.08e-08;5!UBERON:0011137;4.40e-08;11!UBERON:0010323;4.40e-08;11!UBERON:0001004;1.54e-07;65!UBERON:0005910;3.83e-07;6!UBERON:0000974;5.42e-07;6 | |||
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|short_description=p@chr18:26736784..26736799,+ | |short_description=p@chr18:26736784..26736799,+ | ||
}} | }} |
Latest revision as of 00:15, 26 July 2015
Short description: | p@chr18:26736784..26736799, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:26736784..26736799, + |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 7.00e-31 | 14 |
endo-epithelial cell | 3.18e-29 | 42 |
epithelial cell of Malassez | 2.99e-28 | 3 |
gingival epithelial cell | 9.01e-28 | 3 |
stratified squamous epithelial cell | 4.54e-24 | 6 |
keratin accumulating cell | 4.54e-24 | 6 |
stratified epithelial cell | 4.54e-24 | 6 |
keratinizing barrier epithelial cell | 4.54e-24 | 6 |
epithelial fate stem cell | 4.54e-24 | 6 |
stratified epithelial stem cell | 4.54e-24 | 6 |
surface ectodermal cell | 4.54e-24 | 6 |
endodermal cell | 1.21e-20 | 58 |
respiratory epithelial cell | 1.42e-17 | 13 |
keratinocyte | 9.65e-17 | 5 |
epidermal cell | 4.11e-16 | 9 |
epithelial cell of alimentary canal | 8.06e-16 | 20 |
epithelial cell | 2.64e-14 | 253 |
duct epithelial cell | 3.36e-13 | 3 |
branched duct epithelial cell | 3.36e-13 | 3 |
tracheal epithelial cell | 3.36e-13 | 3 |
tracheoblast | 3.36e-13 | 3 |
ecto-epithelial cell | 2.51e-12 | 34 |
transitional epithelial cell | 2.75e-10 | 4 |
urothelial cell | 2.75e-10 | 4 |
buccal mucosa cell | 3.01e-10 | 1 |
endothelial cell of viscerocranial mucosa | 3.01e-10 | 1 |
keratinized cell of the oral mucosa | 3.01e-10 | 1 |
embryonic cell | 5.04e-10 | 250 |
ectodermal cell | 8.25e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 9.01e-28 | 3 |
mouth mucosa | 1.57e-24 | 13 |
jaw skeleton | 2.32e-21 | 4 |
splanchnocranium | 2.32e-21 | 4 |
primary subdivision of cranial skeletal system | 3.24e-17 | 5 |
mucosa | 8.06e-16 | 20 |
surface structure | 1.39e-15 | 99 |
protuberance | 1.91e-14 | 6 |
pharyngeal arch | 1.91e-14 | 6 |
embryonic head | 1.91e-14 | 6 |
head | 7.11e-12 | 56 |
respiratory system | 8.42e-11 | 74 |
epithelium of mucosa | 8.51e-11 | 8 |
gingiva | 8.51e-11 | 8 |
mouth | 8.79e-11 | 29 |
stomodeum | 8.79e-11 | 29 |
anterior region of body | 1.33e-10 | 62 |
craniocervical region | 1.33e-10 | 62 |
oral opening | 3.51e-10 | 22 |
mucosa of oral region | 5.46e-10 | 4 |
respiratory system mucosa | 5.46e-10 | 4 |
skin epidermis | 9.34e-10 | 15 |
outer epithelium | 9.34e-10 | 15 |
enveloping layer of ectoderm | 9.34e-10 | 15 |
endoderm-derived structure | 8.85e-09 | 160 |
endoderm | 8.85e-09 | 160 |
presumptive endoderm | 8.85e-09 | 160 |
orifice | 1.11e-08 | 36 |
urothelium | 2.11e-08 | 5 |
pharyngeal arch system | 2.67e-08 | 18 |
cranial skeletal system | 4.09e-08 | 11 |
transitional epithelium | 3.89e-07 | 6 |