FFCP PHASE1:Hg19::chr18:658682..658698,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:658682..658698,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr18:658682..658698,+ | |description=CAGE_peak_at_chr18:658682..658698,+ | ||
|id=chr18:658682..658698,+ | |id=chr18:658682..658698,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.21e-15;2!CL:0002363;2.21e-15;2!CL:0000558;2.21e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.05e-15,2;CL:0000765,2.05e-15,2;CL:0000050,2.05e-15,2;CL:0000038,2.05e-15,2;CL:0000558,2.05e-15,2;CL:0000547,2.05e-15,2;CL:0000549,2.05e-15,2;CL:0000550,2.05e-15,2;CL:0000552,2.05e-15,2;CL:0002363,2.37e-15,2;CL:0000008,2.37e-15,2 | |||
|ontology_enrichment_development_v019=CL:0000008;2.21e-15;2!UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10 | |||
|ontology_enrichment_disease=DOID:162!1.89e-09!235;DOID:14566!5.15e-09!239;DOID:2531!1.23e-08!51;DOID:0060083!1.23e-08!51;DOID:1240!1.78e-08!39;DOID:8692!8.40e-07!31 | |ontology_enrichment_disease=DOID:162!1.89e-09!235;DOID:14566!5.15e-09!239;DOID:2531!1.23e-08!51;DOID:0060083!1.23e-08!51;DOID:1240!1.78e-08!39;DOID:8692!8.40e-07!31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003566;2.21e-15;2!UBERON:0001777;2.21e-15;2!UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11!UBERON:0003891;2.35e-08;4!UBERON:0000964;2.35e-08;4!UBERON:0010409;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,2.37e-15,2;UBERON:0001777,2.37e-15,2;UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11;UBERON:0003891,2.43e-08,4;UBERON:0000964,2.43e-08,4;UBERON:0010409,2.43e-08,4;UBERON:0004348,2.43e-08,4;UBERON:0005427,2.43e-08,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,6.28699562389021,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.336255431980582,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,1.0457418040996,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0.213425530045242,0,0,0,0.211673582723883,0,0,0,0.313359791546046,0,0,0.321176150207399,0,0,0,0.307240764308458,0.447352215784832,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,1.03423011972439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,1.19472429772959,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0.537266523244462,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.316027223465453,0.116241425368125,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0.33883824611688,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,10.2301242594623,29.2080901870235,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:658682..658698,+ | |short_description=p@chr18:658682..658698,+ | ||
}} | }} |
Latest revision as of 01:57, 26 July 2015
Short description: | p@chr18:658682..658698, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:658682..658698, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.05e-15 | 2 |
erythroblast | 2.05e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 2.05e-15 | 2 |
erythroid progenitor cell | 2.05e-15 | 2 |
reticulocyte | 2.05e-15 | 2 |
proerythroblast | 2.05e-15 | 2 |
basophilic erythroblast | 2.05e-15 | 2 |
polychromatophilic erythroblast | 2.05e-15 | 2 |
orthochromatic erythroblast | 2.05e-15 | 2 |
keratocyte | 2.37e-15 | 2 |
migratory cranial neural crest cell | 2.37e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 2.37e-15 | 2 |
substantia propria of cornea | 2.37e-15 | 2 |
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |
stroma | 2.43e-08 | 4 |
cornea | 2.43e-08 | 4 |
eye surface | 2.43e-08 | 4 |
optic eminence | 2.43e-08 | 4 |
corneal primordium | 2.43e-08 | 4 |