FFCP PHASE1:Hg19::chr19:39687596..39687612,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=342897 | |EntrezGene=342897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33739 | |HGNC=33739 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZVX7 | |UniProt=Q6ZVX7 | ||
|association_with_transcript=0bp_to_ENST00000339852,NM_001001414,uc002okq.1_5end | |association_with_transcript=0bp_to_ENST00000339852,NM_001001414,uc002okq.1_5end | ||
|cluster_id=chr19:39687596..39687612,+ | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_1_at_NCCRP1_5end | |description=CAGE_peak_1_at_NCCRP1_5end | ||
|id=chr19:39687596..39687612,+ | |id=chr19:39687596..39687612,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.00e-14!254;CL:0002076!7.91e-10!43;CL:0002077!1.04e-08!33;CL:0000147!1.04e-08!14;CL:0000990!8.74e-08!8;CL:0000148!1.42e-07!10;CL:0000541!1.42e-07!10;CL:0000150!3.59e-07!9;CL:0002368!4.01e-07!13;CL:0000453!6.78e-07!5 | |ontology_enrichment_celltype=CL:0000066!2.00e-14!254;CL:0002076!7.91e-10!43;CL:0002077!1.04e-08!33;CL:0000147!1.04e-08!14;CL:0000990!8.74e-08!8;CL:0000148!1.42e-07!10;CL:0000541!1.42e-07!10;CL:0000150!3.59e-07!9;CL:0002368!4.01e-07!13;CL:0000453!6.78e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000147;2.73e-12;14!CL:0000990;1.17e-10;8!CL:0002077;1.32e-10;34!CL:0002076;1.83e-10;42!CL:0000148;1.87e-10;10!CL:0002368;4.43e-10;13!CL:0000453;3.57e-09;5!CL:0000622;1.77e-08;5!CL:0000451;2.21e-08;10!CL:0000150;3.38e-08;9!CL:1000507;4.28e-08;10!CL:1000494;4.28e-08;10!CL:0000075;2.19e-07;27!CL:0002159;4.28e-07;14!CL:0002322;5.29e-07;5!CL:0000154;5.99e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.29e-18,253;CL:0002076,3.98e-14,42;CL:0000147,3.28e-12,14;CL:0002077,5.65e-12,34;CL:0000990,1.03e-10,8;CL:0000148,2.12e-10,10;CL:0000541,2.12e-10,10;CL:0002368,4.09e-10,13;CL:0000453,3.35e-09,5;CL:0000622,1.80e-08,5;CL:0000451,1.99e-08,10;CL:0000223,2.27e-08,58;CL:0000150,3.58e-08,9;CL:1000507,4.01e-08,10;CL:1000494,4.01e-08,10;CL:0000075,2.45e-07,27;CL:0002159,3.81e-07,14;CL:0002322,5.51e-07,5;CL:0000154,6.07e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.45e-08;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.53e-18!169;UBERON:0000925!6.53e-18!169;UBERON:0006595!6.53e-18!169;UBERON:0001004!4.64e-17!72;UBERON:0001007!1.79e-14!155;UBERON:0001555!1.79e-14!155;UBERON:0007026!1.79e-14!155;UBERON:0000065!4.08e-14!53;UBERON:0004921!6.71e-13!129;UBERON:0004185!6.71e-13!129;UBERON:0000077!2.05e-12!130;UBERON:0001557!1.24e-11!19;UBERON:0001737!6.93e-11!9;UBERON:0000072!2.82e-10!46;UBERON:0001041!9.70e-10!98;UBERON:0008947!9.97e-10!38;UBERON:0003258!9.97e-10!38;UBERON:0000161!3.85e-09!35;UBERON:0001008!2.38e-08!45;UBERON:0000166!4.20e-08!21;UBERON:0006554!7.80e-08!44;UBERON:0000464!2.00e-07!104;UBERON:0000063!3.19e-07!97;UBERON:0000165!3.36e-07!28;UBERON:0000930!3.36e-07!28;UBERON:0003104!3.43e-07!238;UBERON:0009142!3.43e-07!238;UBERON:0001444!4.95e-07!48 | |ontology_enrichment_uberon=UBERON:0004119!6.53e-18!169;UBERON:0000925!6.53e-18!169;UBERON:0006595!6.53e-18!169;UBERON:0001004!4.64e-17!72;UBERON:0001007!1.79e-14!155;UBERON:0001555!1.79e-14!155;UBERON:0007026!1.79e-14!155;UBERON:0000065!4.08e-14!53;UBERON:0004921!6.71e-13!129;UBERON:0004185!6.71e-13!129;UBERON:0000077!2.05e-12!130;UBERON:0001557!1.24e-11!19;UBERON:0001737!6.93e-11!9;UBERON:0000072!2.82e-10!46;UBERON:0001041!9.70e-10!98;UBERON:0008947!9.97e-10!38;UBERON:0003258!9.97e-10!38;UBERON:0000161!3.85e-09!35;UBERON:0001008!2.38e-08!45;UBERON:0000166!4.20e-08!21;UBERON:0006554!7.80e-08!44;UBERON:0000464!2.00e-07!104;UBERON:0000063!3.19e-07!97;UBERON:0000165!3.36e-07!28;UBERON:0000930!3.36e-07!28;UBERON:0003104!3.43e-07!238;UBERON:0009142!3.43e-07!238;UBERON:0001444!4.95e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.80e-15;9!UBERON:0001557;6.80e-15;9!UBERON:0000065;2.15e-12;44!UBERON:0000072;2.78e-10;37!UBERON:0001004;2.01e-09;65!UBERON:0006554;3.01e-09;30!UBERON:0001008;3.01e-09;30!UBERON:0004211;4.28e-08;10!UBERON:0009773;4.28e-08;10!UBERON:0001231;4.28e-08;10!UBERON:0004810;4.28e-08;10!UBERON:0000161;3.16e-07;19!UBERON:0000166;3.16e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.23e-21,74;UBERON:0004119,1.30e-19,160;UBERON:0000925,1.30e-19,160;UBERON:0006595,1.30e-19,160;UBERON:0000065,1.54e-18,54;UBERON:0001557,7.74e-17,19;UBERON:0004921,9.77e-16,118;UBERON:0000072,3.94e-15,47;UBERON:0001007,6.26e-15,145;UBERON:0001555,6.26e-15,145;UBERON:0007026,6.26e-15,145;UBERON:0001737,6.70e-15,9;UBERON:0001041,1.82e-13,87;UBERON:0008947,3.76e-12,38;UBERON:0003258,3.76e-12,38;UBERON:0000161,1.02e-09,36;UBERON:0001008,3.39e-09,48;UBERON:0000166,6.95e-09,22;UBERON:0006554,1.54e-08,47;UBERON:0000153,2.95e-08,62;UBERON:0007811,2.95e-08,62;UBERON:0004810,4.01e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,4.18680700783456,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,28.5020579588467,16.867531451582,9.61360426433648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,3.63239701580021,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,1.24430121722827,45.1726157482752,55.6176664176644,4.21911611751088,4.87563264437948,4.52057065764142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,39.2484646928281,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,22.0317372606158,13.3645599089509,3.72845974005705,5.12289565744301,3.44577397635862,6.73924868643207,6.01234119089148,4.28945446488568,2.18986415445498,0,0,0,0,0,43.3002888145829,42.6519265897597,41.2128861100754,39.2646542927322,39.6540588248179,36.0651341048867,46.9212952397372,47.8780374905844,43.8611758918885,0,0,0,2.94017422771084,0,0,0,0,0,0,11.8530308241316,14.6122279234905,1.40740561376283,0.462942225792648,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,1.87467667973554,0,1.70130116690864,0,0.290633938513962,0,0,0,0.414656231081544,0,0.6312121671319,87.3731025460246,0,1.17217447210047,3.4214489204541,4.21592720083626,6.60754727256618,40.0157005682809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.120859449591622,3.40860999515584,22.191518333551,0,0,0.131124414959424,32.9375717422411,16.0962054548227,2.35304930753057,1.46139224653261,1.89992932007176,0,0,0,0,0.270946437543853,0,17.0767102940176,16.6215201785745,5.1491193586101,0,0.261435451024901,20.0031097590784,1.31205858279882,2.27764876265012,8.44936295511323,0,0,16.653700601889,31.202891809753,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,10.7435194984636,7.87979276196935,2.67986696238627,14.7690360049103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,6.73554789078584,33.5151137767894,10.8890984861323,7.71979166369589,5.16606447205476,11.7930032967338,31.9269710546406,4.13502120372527,0,0,0,0,0,0,0,0,0.854592569019785,0,2.69544237579135,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,9.66993704359017,0.251932747854276,0,0,0,0,0.716084698702437,0,2.26879832964947,0,0,0,0,0,0,0,0,0,0,8.74634422541365,0,0,0,0,0,0,0,0,0.438770794307945,0,0,66.5619736057845,0,2.76676685265672,0.807818799687949,13.254979374485,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0.995261931078505,2.29989667708682,2.4441205797345,0,0,0,0,0,0,0,0,0,0.789168805698781,3.62972148145992,0,0.189559738885464,0,0,0,0,0,0,57.2065187519883,0,2.42983633669183,3.13575671726008,0.174118413160805,0,0,0,0.0730893170861856,0,283.983840278092,0,32.5412266723967,0,0,0.0633107959558787,48.6922943009659,8.49683494666257,0.85381197895741,3.79638258206047,0,0,0,0,0,119.025487481482,0,0,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.643012593860077,1.65047323916681,1.24632101408756,16.8730418663625,20.8926527730646,0,0.670869375198532,2.83700546277113,3.56691199317987,0.422401346077626,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.79318464064088,0,0,0,0,0,75.4152073878839,0.106787412567695,0.471612915298998,3.31391244277756,7.93865634899121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,1.10678907948985,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,4.07439023612359,0.260994291965212,0,0,0,0,3.70561736593167,0,0,0,0,0,0.345430341731199,0,0.138258436151731,726.63409166208,236.898010278726,1235.90011899716,0,0,0,0,0,0,0,0,24.0592753277445,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,1.28400018965175,1.27078232765372,0,0,0,0.376051641746286,0.20170506870352,7.81514011233093,0.261906694481422,0,6.80137996598408,0,0,0,0,0,0.548257766857182,11.9090682813431,0,0,0,0,0,0,20.6676522478948,0,0,0.0679697329768317,0,0,2.33585943973345,1.17739639275771,0,0,0.913158720509496,0,1.9110067515482,60.0402971083913,0.158013611732727,0,0.173858272302579,0,12.0185375214561,11.0967010111067,358.0725048197,6.02318302348389,0,0,0.423387050190929,0,0,0,1.67783147696688,0,0,0,0,0,16.0284627709516,0,0,0,0,0,0,7.40871917836269,2.18559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.773494655682926,0,0,0,0,0.730336388246517,2.2936464170227,0,0,0.0679914901909147,0,3.1741610430924,0,0,0,0.252332849670158,0,6.46162355158329,0.509944148709909,0,0.0918948995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| ||
|short_description=p1@NCCRP1 | |short_description=p1@NCCRP1 | ||
}} | }} |
Latest revision as of 21:24, 17 September 2015
Short description: | p1@NCCRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCCRP1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 0bp_to_ENST00000339852, NM_001001414, uc002okq.1_5end |
EntrezGene: | NCCRP1 |
HGNC: | 33739 |
UniProt: | Q6ZVX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.29e-18 | 253 |
endo-epithelial cell | 3.98e-14 | 42 |
pigment cell | 3.28e-12 | 14 |
ecto-epithelial cell | 5.65e-12 | 34 |
conventional dendritic cell | 1.03e-10 | 8 |
melanocyte | 2.12e-10 | 10 |
melanoblast | 2.12e-10 | 10 |
respiratory epithelial cell | 4.09e-10 | 13 |
Langerhans cell | 3.35e-09 | 5 |
acinar cell | 1.80e-08 | 5 |
dendritic cell | 1.99e-08 | 10 |
endodermal cell | 2.27e-08 | 58 |
glandular epithelial cell | 3.58e-08 | 9 |
kidney tubule cell | 4.01e-08 | 10 |
nephron tubule epithelial cell | 4.01e-08 | 10 |
columnar/cuboidal epithelial cell | 2.45e-07 | 27 |
general ecto-epithelial cell | 3.81e-07 | 14 |
embryonic stem cell | 5.51e-07 | 5 |
protein secreting cell | 6.07e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 2.23e-21 | 74 |
endoderm-derived structure | 1.30e-19 | 160 |
endoderm | 1.30e-19 | 160 |
presumptive endoderm | 1.30e-19 | 160 |
respiratory tract | 1.54e-18 | 54 |
upper respiratory tract | 7.74e-17 | 19 |
subdivision of digestive tract | 9.77e-16 | 118 |
segment of respiratory tract | 3.94e-15 | 47 |
digestive system | 6.26e-15 | 145 |
digestive tract | 6.26e-15 | 145 |
primitive gut | 6.26e-15 | 145 |
larynx | 6.70e-15 | 9 |
foregut | 1.82e-13 | 87 |
respiratory primordium | 3.76e-12 | 38 |
endoderm of foregut | 3.76e-12 | 38 |
orifice | 1.02e-09 | 36 |
renal system | 3.39e-09 | 48 |
oral opening | 6.95e-09 | 22 |
urinary system structure | 1.54e-08 | 47 |
anterior region of body | 2.95e-08 | 62 |
craniocervical region | 2.95e-08 | 62 |
nephron tubule epithelium | 4.01e-08 | 10 |