FFCP PHASE1:Hg19::chr1:207277632..207277676,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=722 | |EntrezGene=722 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1325 | |HGNC=1325 | ||
|TSSclassifier=strong | |||
|UniProt=A6PVY5 | |UniProt=A6PVY5 | ||
|association_with_transcript=0bp_to_ENST00000421786_5end | |association_with_transcript=0bp_to_ENST00000421786_5end | ||
|cluster_id=chr1:207277632..207277676,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_C4BPA_5end | |description=CAGE_peak_1_at_C4BPA_5end | ||
|id=chr1:207277632..207277676,+ | |id=chr1:207277632..207277676,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.82e-11!12;CL:0000417!1.82e-11!12;CL:0000668!1.82e-11!12;CL:0000414!1.82e-11!12;CL:0000412!1.82e-11!12;CL:0000182!1.82e-11!12 | |ontology_enrichment_celltype=CL:0000181!1.82e-11!12;CL:0000417!1.82e-11!12;CL:0000668!1.82e-11!12;CL:0000414!1.82e-11!12;CL:0000412!1.82e-11!12;CL:0000182!1.82e-11!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.07e-26;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.01e-26,12;CL:0000223,7.20e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.42e-22;11!UBERON:0009497;2.64e-18;13!UBERON:0001041;3.52e-18;30!UBERON:0003104;1.96e-11;31!UBERON:0008947;2.37e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.44e-10!106;DOID:0050687!6.03e-07!143 | |ontology_enrichment_disease=DOID:305!1.44e-10!106;DOID:0050687!6.03e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001041!8.28e-19!98;UBERON:0004921!1.36e-17!129;UBERON:0004185!1.36e-17!129;UBERON:0001737!1.59e-16!9;UBERON:0000077!2.10e-15!130;UBERON:0001007!2.42e-14!155;UBERON:0001555!2.42e-14!155;UBERON:0007026!2.42e-14!155;UBERON:0004119!5.90e-13!169;UBERON:0000925!5.90e-13!169;UBERON:0006595!5.90e-13!169;UBERON:0001557!5.69e-12!19;UBERON:0005057!1.09e-11!26;UBERON:0002107!1.53e-10!19;UBERON:0006925!1.53e-10!19;UBERON:0008836!1.53e-10!19;UBERON:0008835!2.12e-10!22;UBERON:0003894!2.12e-10!22;UBERON:0009497!2.26e-10!25;UBERON:0000015!2.26e-10!25;UBERON:0002423!2.26e-10!25;UBERON:0006235!2.26e-10!25;UBERON:0004161!2.26e-10!25;UBERON:0009854!7.95e-10!23;UBERON:0007499!8.08e-09!25;UBERON:0008947!1.32e-08!38;UBERON:0003258!1.32e-08!38;UBERON:0000949!1.97e-08!45;UBERON:0009856!2.24e-08!26;UBERON:0003929!3.71e-08!54;UBERON:0001048!4.84e-08!168;UBERON:0002368!9.36e-08!35;UBERON:0000065!1.04e-07!53;UBERON:0002405!1.64e-07!115;UBERON:0005911!7.12e-07!82 | |ontology_enrichment_uberon=UBERON:0001041!8.28e-19!98;UBERON:0004921!1.36e-17!129;UBERON:0004185!1.36e-17!129;UBERON:0001737!1.59e-16!9;UBERON:0000077!2.10e-15!130;UBERON:0001007!2.42e-14!155;UBERON:0001555!2.42e-14!155;UBERON:0007026!2.42e-14!155;UBERON:0004119!5.90e-13!169;UBERON:0000925!5.90e-13!169;UBERON:0006595!5.90e-13!169;UBERON:0001557!5.69e-12!19;UBERON:0005057!1.09e-11!26;UBERON:0002107!1.53e-10!19;UBERON:0006925!1.53e-10!19;UBERON:0008836!1.53e-10!19;UBERON:0008835!2.12e-10!22;UBERON:0003894!2.12e-10!22;UBERON:0009497!2.26e-10!25;UBERON:0000015!2.26e-10!25;UBERON:0002423!2.26e-10!25;UBERON:0006235!2.26e-10!25;UBERON:0004161!2.26e-10!25;UBERON:0009854!7.95e-10!23;UBERON:0007499!8.08e-09!25;UBERON:0008947!1.32e-08!38;UBERON:0003258!1.32e-08!38;UBERON:0000949!1.97e-08!45;UBERON:0009856!2.24e-08!26;UBERON:0003929!3.71e-08!54;UBERON:0001048!4.84e-08!168;UBERON:0002368!9.36e-08!35;UBERON:0000065!1.04e-07!53;UBERON:0002405!1.64e-07!115;UBERON:0005911!7.12e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.87e-25;19!UBERON:0006925;2.87e-25;19!UBERON:0002423;9.74e-19;25!UBERON:0002368;1.11e-14;33!UBERON:0002365;2.07e-14;31!UBERON:0002330;2.07e-14;31!UBERON:0000949;6.76e-11;43!UBERON:0005172;9.53e-09;52!UBERON:0005173;9.53e-09;52!UBERON:0002417;8.02e-07;58!UBERON:0000916;8.02e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.84e-25,19;UBERON:0006925,2.84e-25,19;UBERON:0008836,2.84e-25,19;UBERON:0008835,1.46e-21,22;UBERON:0003894,1.46e-21,22;UBERON:0009854,1.54e-20,23;UBERON:0007499,9.66e-19,25;UBERON:0009497,9.66e-19,25;UBERON:0000015,9.66e-19,25;UBERON:0002423,9.66e-19,25;UBERON:0006235,9.66e-19,25;UBERON:0004161,9.66e-19,25;UBERON:0009856,6.03e-18,26;UBERON:0001041,2.02e-16,87;UBERON:0002368,1.85e-15,35;UBERON:0002365,9.72e-15,31;UBERON:0002330,9.72e-15,31;UBERON:0000949,8.36e-14,45;UBERON:0004921,1.23e-13,118;UBERON:0005177,1.45e-13,101;UBERON:0005172,5.05e-13,54;UBERON:0005173,5.05e-13,54;UBERON:0002417,1.90e-11,60;UBERON:0000916,1.90e-11,60;UBERON:0005911,1.37e-10,82;UBERON:0009569,2.02e-10,112;UBERON:0001007,2.99e-10,145;UBERON:0001555,2.99e-10,145;UBERON:0007026,2.99e-10,145;UBERON:0003929,2.86e-09,54;UBERON:0004119,7.18e-09,160;UBERON:0000925,7.18e-09,160;UBERON:0006595,7.18e-09,160;UBERON:0002530,2.76e-08,59 | |||
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| ||
|short_description=p1@C4BPA | |short_description=p1@C4BPA | ||
}} | }} |
Latest revision as of 07:25, 20 September 2015
Short description: | p1@C4BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C4BPA_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000421786_5end |
EntrezGene: | C4BPA |
HGNC: | 1325 |
UniProt: | A6PVY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.01e-26 | 12 |
endodermal cell | 7.20e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.84e-25 | 19 |
digestive gland | 2.84e-25 | 19 |
liver bud | 2.84e-25 | 19 |
hepatic diverticulum | 1.46e-21 | 22 |
liver primordium | 1.46e-21 | 22 |
digestive tract diverticulum | 1.54e-20 | 23 |
epithelial sac | 9.66e-19 | 25 |
epithelium of foregut-midgut junction | 9.66e-19 | 25 |
anatomical boundary | 9.66e-19 | 25 |
hepatobiliary system | 9.66e-19 | 25 |
foregut-midgut junction | 9.66e-19 | 25 |
septum transversum | 9.66e-19 | 25 |
sac | 6.03e-18 | 26 |
foregut | 2.02e-16 | 87 |
endocrine gland | 1.85e-15 | 35 |
exocrine gland | 9.72e-15 | 31 |
exocrine system | 9.72e-15 | 31 |
endocrine system | 8.36e-14 | 45 |
subdivision of digestive tract | 1.23e-13 | 118 |
trunk region element | 1.45e-13 | 101 |
abdomen element | 5.05e-13 | 54 |
abdominal segment element | 5.05e-13 | 54 |
abdominal segment of trunk | 1.90e-11 | 60 |
abdomen | 1.90e-11 | 60 |
endo-epithelium | 1.37e-10 | 82 |
subdivision of trunk | 2.02e-10 | 112 |
digestive system | 2.99e-10 | 145 |
digestive tract | 2.99e-10 | 145 |
primitive gut | 2.99e-10 | 145 |
gut epithelium | 2.86e-09 | 54 |
endoderm-derived structure | 7.18e-09 | 160 |
endoderm | 7.18e-09 | 160 |
presumptive endoderm | 7.18e-09 | 160 |
gland | 2.76e-08 | 59 |