FFCP PHASE1:Hg19::chr2:233246427..233246435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=250 | |EntrezGene=250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=439 | |HGNC=439 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_AF217992_5end | |association_with_transcript=-36bp_to_AF217992_5end | ||
|cluster_id=chr2:233246427..233246435,+ | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_18_at_ALPP_5end | |description=CAGE_peak_18_at_ALPP_5end | ||
|id=chr2:233246427..233246435,+ | |id=chr2:233246427..233246435,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.88e-21;29 | |||
|ontology_enrichment_disease=DOID:305!4.85e-12!106;DOID:0050687!9.97e-09!143 | |ontology_enrichment_disease=DOID:305!4.85e-12!106;DOID:0050687!9.97e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.31e-147!9;UBERON:0001557!7.20e-86!19;UBERON:0000072!3.48e-35!46;UBERON:0008947!1.08e-34!38;UBERON:0003258!1.08e-34!38;UBERON:0000065!1.85e-30!53;UBERON:0001004!2.98e-22!72;UBERON:0000063!2.48e-16!97;UBERON:0001041!3.71e-16!98;UBERON:0000077!5.53e-12!130;UBERON:0004921!5.53e-12!129;UBERON:0004185!5.53e-12!129;UBERON:0001007!7.64e-10!155;UBERON:0001555!7.64e-10!155;UBERON:0007026!7.64e-10!155;UBERON:0001048!4.47e-09!168;UBERON:0004119!5.86e-09!169;UBERON:0000925!5.86e-09!169;UBERON:0006595!5.86e-09!169;UBERON:0000064!3.15e-08!219 | |ontology_enrichment_uberon=UBERON:0001737!1.31e-147!9;UBERON:0001557!7.20e-86!19;UBERON:0000072!3.48e-35!46;UBERON:0008947!1.08e-34!38;UBERON:0003258!1.08e-34!38;UBERON:0000065!1.85e-30!53;UBERON:0001004!2.98e-22!72;UBERON:0000063!2.48e-16!97;UBERON:0001041!3.71e-16!98;UBERON:0000077!5.53e-12!130;UBERON:0004921!5.53e-12!129;UBERON:0004185!5.53e-12!129;UBERON:0001007!7.64e-10!155;UBERON:0001555!7.64e-10!155;UBERON:0007026!7.64e-10!155;UBERON:0001048!4.47e-09!168;UBERON:0004119!5.86e-09!169;UBERON:0000925!5.86e-09!169;UBERON:0006595!5.86e-09!169;UBERON:0000064!3.15e-08!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.75e-66;9!UBERON:0001557;3.75e-66;9!UBERON:0000072;5.91e-18;37!UBERON:0000065;2.27e-10;44!UBERON:0001004;3.39e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.75e-66,9;UBERON:0001557,4.52e-32,19;UBERON:0008947,1.18e-16,38;UBERON:0003258,1.18e-16,38;UBERON:0000072,1.10e-13,47;UBERON:0000065,4.68e-12,54;UBERON:0001004,4.40e-09,74;UBERON:0001041,7.10e-08,87 | |||
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|short_description=p18@ALPP | |short_description=p18@ALPP | ||
}} | }} |
Latest revision as of 21:05, 15 September 2015
Short description: | p18@ALPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_ALPP_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -36bp_to_AF217992_5end |
EntrezGene: | ALPP |
HGNC: | 439 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 3.75e-66 | 9 |
upper respiratory tract | 4.52e-32 | 19 |
respiratory primordium | 1.18e-16 | 38 |
endoderm of foregut | 1.18e-16 | 38 |
segment of respiratory tract | 1.10e-13 | 47 |
respiratory tract | 4.68e-12 | 54 |
respiratory system | 4.40e-09 | 74 |
foregut | 7.10e-08 | 87 |